vOTU vOTU-120503

vOTU: vOTU-120503

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-120503
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vOTU-120503
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1454382
Biosample ID	N/A
Genome length (bp)	34,525 bps
CheckV completeness	81.48% (Medium-quality)
CDS count	57
CDS density	92.29%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4	Total connections	267	Host agreement	77.53
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1454382_1	phrog_22529	62.0	5.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1454382_1	411459.RUMOBE_01350	70.5	0.000000000000654	3D domain	N/A
COG	UHGV-1454382_1	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
Pfam	UHGV-1454382_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1454382_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1454382_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454382_7	UniRef90_A0A3D3Y0G5	102.0	6.71e-25	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1454382_7	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_8	phrog_585	81.6	7.7e-24	N/A	unknown function
UniRef90	UHGV-1454382_8	UniRef90_UPI00129D2984	77.0	0.00000000000000242	N/A	N/A
eggNOG-mapper	UHGV-1454382_8	1280692.AUJL01000009_gene2980	72.0	0.00000000000004	N/A	N/A
Pfam	UHGV-1454382_8	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-1454382_8	PF10711,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_11	phrog_301	40.0	0.000000000068	secreted protein	other
eggNOG-mapper	UHGV-1454382_11	1262449.CP6013_2082	174.0	0	N/A	N/A
structural_annotation	UHGV-1454382_11	PF11631,TIGR03066	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454382_12	UniRef90_A7VNR4	55.5	0.000000755	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1454382_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1454382_12	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1454382_13	K14059	196.6	0	int; integrase	N/A
PHROG	UHGV-1454382_13	phrog_1	176.1	0	integrase	integration and excision
UniRef90	UHGV-1454382_13	UniRef90_UPI001EDE32BF	493.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1454382_13	1226322.HMPREF1545_00144	324.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1454382_13	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1454382_13	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1454382_13	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1454382_14	1232443.BAIA02000078_gene6	58.2	0.00000000231	N/A	N/A
PHROG	UHGV-1454382_15	phrog_28802	44.3	0.00000000000071	N/A	unknown function
eggNOG-mapper	UHGV-1454382_15	476272.RUMHYD_01772	59.7	0.00000000367	N/A	N/A
PHROG	UHGV-1454382_16	phrog_20016	176.4	0	N/A	unknown function
UniRef90	UHGV-1454382_16	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1454382_16	397290.C810_05214	157.0	0	N/A	N/A
structural_annotation	UHGV-1454382_16	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_17	phrog_16490	144.0	1.3004e-42	N/A	unknown function
eggNOG-mapper	UHGV-1454382_17	1408437.JNJN01000043_gene803	154.0	8.54792e-44	N/A	N/A
PHROG	UHGV-1454382_18	phrog_22984	73.2	1.1e-21	N/A	unknown function
PHROG	UHGV-1454382_19	phrog_21718	113.2	1.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-1454382_19	397290.C810_05210	67.8	0.00000000000404	N/A	N/A
PHROG	UHGV-1454382_20	phrog_3754	109.2	3.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1454382_20	1226322.HMPREF1545_00073	160.0	0	N/A	N/A
KOfam	UHGV-1454382_23	K07729	59.2	8.7e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1454382_23	phrog_8	53.1	0.0000000000000079	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1454382_23	1394176.AWUO01000014_gene642	53.5	0.00000064	N/A	N/A
Pfam	UHGV-1454382_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1454382_23	PF01381,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1454382_24	UniRef90_A0A8D9PDQ3	85.9	1.53e-20	ECF sigma factor	N/A
structural_annotation	UHGV-1454382_24	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1454382_25	K17733	96.1	3.5e-28	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1454382_25	phrog_6523	80.4	2.9e-23	endolysin	lysis
UniRef90	UHGV-1454382_25	UniRef90_R5RXG6	218.0	0	Serine-type D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-1454382_25	1519439.JPJG01000023_gene536	209.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-1454382_25	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-1454382_25	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-1454382_25	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_26	phrog_881	86.3	1.8e-25	holin	lysis
UniRef90	UHGV-1454382_26	UniRef90_A0A133N4A6	83.2	1.49e-19	Holin family protein	N/A
eggNOG-mapper	UHGV-1454382_26	742740.HMPREF9474_02251	77.8	3.76e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-1454382_26	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1454382_26	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_28	phrog_937	47.0	0.00000000000043	hemolysin	other
eggNOG-mapper	UHGV-1454382_28	1519439.JPJG01000023_gene533	94.4	6.14e-24	N/A	N/A
PHROG	UHGV-1454382_29	phrog_27545	152.5	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1454382_29	UniRef90_D1PRE7	164.0	0	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-1454382_29	1519439.JPJG01000060_gene1895	358.0	0	N/A	N/A
Pfam	UHGV-1454382_29	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1454382_29	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_30	phrog_10993	208.1	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1454382_30	UniRef90_UPI00051B4A1C	308.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454382_30	1519439.JPJG01000060_gene1894	308.0	0	N/A	N/A
Pfam	UHGV-1454382_30	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1454382_30	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1454382_30	PF19789,PF18707,NF041825,COG3330	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1454382_31	1519439.JPJG01000060_gene1892	209.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1454382_31	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-1454382_33	529884.Rhola_00002520	60.5	0.000000126	regulation of response to stimulus	N/A
Pfam	UHGV-1454382_33	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
COG	UHGV-1454382_33	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-1454382_33	PF21605,NF041825,COG3198	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1454382_34	1235797.C816_04179	212.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-1454382_34	PF14594	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_35	phrog_32308	51.1	0.0000000000000024	N/A	unknown function
UniRef90	UHGV-1454382_35	UniRef90_A0A2Z4QA17	259.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-1454382_35	1235797.C816_04180	293.0	0	N/A	N/A
structural_annotation	UHGV-1454382_35	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_36	phrog_1194	78.4	7.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1454382_36	1232443.BAIA02000078_gene17	123.0	9.58e-35	N/A	N/A
structural_annotation	UHGV-1454382_36	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_37	phrog_1535	84.4	7.5e-32	tail length tape measure protein	tail
UniRef90	UHGV-1454382_37	UniRef90_A0A810PX76	99.8	5.49e-18	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1454382_37	693746.OBV_18190	209.0	0	domain protein	N/A
COG	UHGV-1454382_37	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454382_37	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_38	phrog_17658	53.0	0.0000000000000053	N/A	unknown function
UniRef90	UHGV-1454382_38	UniRef90_A0A316PG91	94.4	8.27e-20	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1454382_38	768710.DesyoDRAFT_1122	87.0	2.56e-18	N/A	N/A
structural_annotation	UHGV-1454382_38	PF18116,COG3402	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_39	phrog_706	98.7	5.9e-29	N/A	unknown function
UniRef90	UHGV-1454382_39	UniRef90_UPI001D069FB9	243.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1454382_39	693746.OBV_18170	188.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1454382_39	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1454382_39	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_40	phrog_11299	73.2	4.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1454382_40	693746.OBV_18160	186.0	0	N/A	N/A
structural_annotation	UHGV-1454382_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_41	phrog_3099	92.0	6.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1454382_41	1232443.BAIA02000078_gene23	233.0	0	N/A	N/A
structural_annotation	UHGV-1454382_41	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_42	phrog_3266	60.6	2.3e-17	tail completion	connector
eggNOG-mapper	UHGV-1454382_42	1232443.BAIA02000078_gene24	192.0	0	N/A	N/A
structural_annotation	UHGV-1454382_42	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_43	phrog_556	69.5	3.7e-20	minor head protein	head and packaging
UniRef90	UHGV-1454382_43	UniRef90_A0A2U1BEM0	197.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1454382_43	1226322.HMPREF1545_00054	154.0	0	Minor capsid protein	N/A
Pfam	UHGV-1454382_43	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1454382_43	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_44	phrog_3366	85.2	7.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1454382_44	1226322.HMPREF1545_00053	147.0	1.55544e-43	N/A	N/A
structural_annotation	UHGV-1454382_44	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_45	phrog_541	110.0	1.3e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1454382_45	642492.Clole_0822	65.5	0.0000000000111	N/A	N/A
PHROG	UHGV-1454382_46	phrog_10	175.0	0	major head protein	head and packaging
UniRef90	UHGV-1454382_46	UniRef90_A0A2U1BEF2	532.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1454382_46	1226322.HMPREF1545_00050	469.0	0	Phage capsid family	N/A
Pfam	UHGV-1454382_46	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1454382_46	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1454382_46	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1454382_46	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_47	phrog_2303	54.6	0.0000000000000016	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1454382_47	1226322.HMPREF1545_00049	152.0	7.00649e-45	N/A	N/A
PHROG	UHGV-1454382_49	phrog_581	287.7	0	minor head protein	head and packaging
UniRef90	UHGV-1454382_49	UniRef90_UPI001D080D49	529.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1454382_49	1226322.HMPREF1545_00046	360.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1454382_49	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1454382_49	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1454382_49	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_51	phrog_8680	229.0	0	N/A	unknown function
UniRef90	UHGV-1454382_51	UniRef90_A0A3R6D7I3	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-1454382_51	411470.RUMGNA_02208	233.0	0	N/A	N/A
Pfam	UHGV-1454382_51	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1454382_51	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1454382_53	phrog_533	352.4	0	portal protein	head and packaging
UniRef90	UHGV-1454382_53	UniRef90_UPI0006C81717	655.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1454382_53	1226322.HMPREF1545_00044	573.0	0	N/A	N/A
Pfam	UHGV-1454382_53	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1454382_53	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1454382_54	K06909	357.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1454382_54	phrog_5653	157.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1454382_54	UniRef90_A0A2U1BEH4	654.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1454382_54	33035.JPJF01000106_gene3136	431.0	0	Terminase small subunit	N/A
Pfam	UHGV-1454382_54	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1454382_54	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1454382_54	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1454382_54	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1454382_54	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1454382_55	K07474	112.2	8e-33	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1454382_55	phrog_51	104.3	8.8e-31	terminase small subunit	head and packaging
UniRef90	UHGV-1454382_55	UniRef90_UPI001D05F697	166.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1454382_55	697281.Mahau_0566	83.2	2.18e-18	Terminase Small Subunit	N/A
Pfam	UHGV-1454382_55	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1454382_55	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1454382_55	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1454382_56	742738.HMPREF9460_02503	124.0	7.44e-36	N/A	N/A
structural_annotation	UHGV-1454382_56	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1454382	Yes	34,525	52	81	1