vOTU vOTU-121150

vOTU: vOTU-121150

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-121150
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00239 → vGENUS-00650 → vOTU-121150
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208877
Biosample ID	SAMN11252264
Genome length (bp)	25,772 bps
CheckV completeness	71.85% (Medium-quality)
CDS count	34
CDS density	97.91%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	674	Host agreement	76.71
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	85	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0208877_1	UniRef90_A0A2N0ULT9	138.0	1.46996e-41	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-0208877_1	1283300.ATXB01000001_gene1737	47.0	0.0000034	DNA excision	N/A
Pfam	UHGV-0208877_1	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0208877_1	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0208877_1	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-0208877_1	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_4	phrog_8470	210.6	0	N/A	unknown function
UniRef90	UHGV-0208877_4	UniRef90_UPI0018E45158	135.0	4.6e-31	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0208877_4	641112.ACOK01000073_gene2870	112.0	4.76e-24	PcfJ-like protein	N/A
Pfam	UHGV-0208877_4	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0208877_4	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_5	phrog_15609	95.3	6.4e-28	N/A	unknown function
UniRef90	UHGV-0208877_5	UniRef90_A0A373SLQ6	155.0	3.61997e-41	N/A	N/A
eggNOG-mapper	UHGV-0208877_5	641112.ACOK01000073_gene2872	111.0	5.84e-26	N/A	N/A
structural_annotation	UHGV-0208877_5	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_6	phrog_253	101.2	3.5e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_6	UniRef90_UPI0019171ADA	180.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0208877_6	1027396.LMOSA_21290	58.2	0.0000000429	Siphovirus Gp157	N/A
Pfam	UHGV-0208877_6	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0208877_6	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_7	phrog_2872	251.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_7	UniRef90_UPI001A9B3ECC	529.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0208877_7	754027.HMPREF9554_00709	224.0	0	N/A	N/A
Pfam	UHGV-0208877_7	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0208877_7	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0208877_8	K19789	326.3	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0208877_8	phrog_16	281.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_8	UniRef90_A0A374N1T8	912.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0208877_8	1410670.JHXF01000015_gene2270	561.0	0	helicase	N/A
PADLOC	UHGV-0208877_8	mREase_IV_00005	112.8	1.2e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0208877_8	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0208877_8	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0208877_8	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0208877_8	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_9	phrog_5702	76.2	1.4e-22	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_9	UniRef90_A0A374N329	209.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0208877_9	1410670.JHXF01000015_gene2271	152.0	0	VRR_NUC	N/A
Pfam	UHGV-0208877_9	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0208877_9	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_10	phrog_378	112.4	3.8e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_10	UniRef90_A0A374ND86	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-0208877_10	1410670.JHXF01000015_gene2272	160.0	0	N/A	N/A
Pfam	UHGV-0208877_10	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0208877_10	PF05037,NF004948	N/A	N/A	N/A	N/A
KOfam	UHGV-0208877_11	K06919	102.8	3.3e-30	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0208877_11	phrog_1829	831.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_11	UniRef90_A0A2N0ULU7	1571.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0208877_11	1410670.JHXF01000015_gene2274	874.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0208877_11	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0208877_11	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0208877_11	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0208877_11	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0208877_11	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0208877_11	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
KOfam	UHGV-0208877_14	K18830	50.9	0.000000000000036	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0208877_14	phrog_8	62.6	8.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0208877_14	UniRef90_A0A374N9T4	122.0	3.31e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0208877_14	717605.Theco_0106	74.7	2.92e-16	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-0208877_14	retron_type_VI_hth_cluster2_1	40.3	0.000000000089	N/A	Retron
Pfam	UHGV-0208877_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0208877_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0208877_14	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_15	phrog_2999	40.8	0.000000000045	N/A	unknown function
UniRef90	UHGV-0208877_17	UniRef90_A0A374MXG7	142.0	1.09021e-42	XRE family transcriptional regulator	N/A
Pfam	UHGV-0208877_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0208877_17	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-0208877_18	phrog_119	55.0	0.0000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0208877_18	UniRef90_A0A374N9T6	226.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0208877_18	1235793.C809_01915	115.0	1.82e-31	HNH endonuclease	N/A
COG	UHGV-0208877_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0208877_19	phrog_1066	116.1	1.6e-34	N/A	unknown function
UniRef90	UHGV-0208877_19	UniRef90_A0A0D0SQQ8	84.0	2e-18	N/A	N/A
eggNOG-mapper	UHGV-0208877_19	1203606.HMPREF1526_00982	104.0	1.89e-27	N/A	N/A
PHROG	UHGV-0208877_20	phrog_9	395.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0208877_20	UniRef90_A0A374NB45	975.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0208877_20	1235793.C809_01917	723.0	0	Phage Terminase	N/A
Pfam	UHGV-0208877_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0208877_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0208877_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0208877_20	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_21	phrog_12	180.4	0	portal protein	head and packaging
UniRef90	UHGV-0208877_21	UniRef90_A0A374NAE1	769.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0208877_21	626523.GCWU000342_01027	407.0	0	Portal protein	N/A
Pfam	UHGV-0208877_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0208877_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0208877_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0208877_22	K01358	121.1	1.3e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0208877_22	phrog_94	189.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0208877_22	UniRef90_A0A374NBM3	409.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0208877_22	1203606.HMPREF1526_00979	180.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0208877_22	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0208877_22	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0208877_22	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_23	phrog_10	151.4	7.00649e-45	major head protein	head and packaging
UniRef90	UHGV-0208877_23	UniRef90_A0A374N9V9	736.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0208877_23	1280689.AUJC01000011_gene1521	329.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0208877_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0208877_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0208877_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0208877_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_24	phrog_5223	55.7	6.9e-16	neck protein	connector
NCBIFam	UHGV-0208877_24	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0208877_24	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_25	phrog_1951	95.3	3.5e-28	head-tail adaptor	connector
UniRef90	UHGV-0208877_25	UniRef90_A0A374MZF9	185.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0208877_25	1414720.CBYM010000040_gene1649	65.9	0.00000000000141	head-tail adaptor	N/A
COG	UHGV-0208877_25	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0208877_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0208877_26	UniRef90_UPI001A9B6FBF	164.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0208877_26	642492.Clole_0747	132.0	7.11e-38	N/A	N/A
structural_annotation	UHGV-0208877_26	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0208877_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_28	phrog_885	137.8	5.99994e-41	major tail protein	tail
UniRef90	UHGV-0208877_28	UniRef90_Q894J4	159.0	2.8026e-45	Conserved protein	N/A
eggNOG-mapper	UHGV-0208877_28	1321814.HMPREF9089_00935	174.0	0	N/A	N/A
structural_annotation	UHGV-0208877_28	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_29	phrog_1021	50.0	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0208877_29	1321778.HMPREF1982_03556	52.0	0.000000732	N/A	N/A
PHROG	UHGV-0208877_31	phrog_991	142.0	5.09933e-42	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0208877_31	457396.CSBG_01057	262.0	0	tape measure	N/A
COG	UHGV-0208877_31	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0208877_31	PF10145,TIGR01760	N/A	N/A	N/A	N/A
UniRef90	UHGV-0208877_32	UniRef90_A0A1G5CPA2	122.0	5.16e-30	Phage-related protein	N/A
eggNOG-mapper	UHGV-0208877_32	1246.JMEA01000006_gene51	67.0	0.000000000224	phage tail	N/A
COG	UHGV-0208877_32	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0208877_32	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_33	phrog_1067	142.9	1.99965e-42	minor head protein	head and packaging
UniRef90	UHGV-0208877_33	UniRef90_A0A348ZBV6	176.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0208877_33	1160721.RBI_I01574	130.0	4.51e-30	Prophage endopeptidase tail	N/A
Pfam	UHGV-0208877_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0208877_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0208877_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0208877_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0208877_34	phrog_5302	282.4	0	tail protein	tail
UniRef90	UHGV-0208877_34	UniRef90_A0A373XLZ6	1195.0	0	N/A	N/A
eggNOG-mapper	UHGV-0208877_34	742740.HMPREF9474_02337	314.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0208877_34	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0208877_34	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0208877_34	PF10651,NF040788	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0208877	Yes	25,772	43	72	1