vOTU vOTU-121163

vOTU: vOTU-121163

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-121163
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00606 → vGENUS-00606 → vOTU-121163
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0046218
Biosample ID	N/A
Genome length (bp)	32,729 bps
CheckV completeness	83.06% (Medium-quality)
CDS count	45
CDS density	89.17%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	84	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	94	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 83.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0046218_1	K07668	172.3	0	vicR; two-component system, OmpR family, response regulator VicR	N/A
PHROG	UHGV-0046218_1	phrog_731	138.1	4.30002e-41	N/A	unknown function
UniRef90	UHGV-0046218_1	UniRef90_R7MA70	253.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-0046218_1	203119.Cthe_2333	178.0	0	response regulator receiver	N/A
Pfam	UHGV-0046218_1	PF00486	N/A	N/A	Transcriptional regulatory protein, C terminal	Trans_reg_C
COG	UHGV-0046218_1	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
PHROG	UHGV-0046218_3	phrog_236	103.2	4.4e-30	nucleotide kinase	other
UniRef90	UHGV-0046218_3	UniRef90_U7UMX2	123.0	1.57e-34	PF11753 family protein	N/A
eggNOG-mapper	UHGV-0046218_3	1111454.HMPREF1250_1038	123.0	2.63e-35	N/A	N/A
Pfam	UHGV-0046218_3	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-0046218_5	K03111	140.2	2.29995e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0046218_5	phrog_44	148.8	3.08286e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0046218_5	UniRef90_R6WK64	269.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0046218_5	626939.HMPREF9443_01150	176.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0046218_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0046218_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0046218_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0046218_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0046218_5	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_7	phrog_190	129.9	1.6e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0046218_7	UniRef90_UPI0018C4B0C5	127.0	6.7e-36	N/A	N/A
eggNOG-mapper	UHGV-0046218_7	1511.CLOST_1536	102.0	3.53e-26	N/A	N/A
Pfam	UHGV-0046218_7	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0046218_7	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_10	phrog_36	82.4	6.1e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0046218_10	UniRef90_R6WQ64	291.0	0	Sigma-70 region 4 domain protein	N/A
eggNOG-mapper	UHGV-0046218_10	1235799.C818_01032	52.0	0.00000198	N/A	N/A
Pfam	UHGV-0046218_10	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0046218_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0046218_10	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_11	568816.Acin_1817	113.0	5.61e-30	N/A	N/A
UniRef90	UHGV-0046218_12	UniRef90_R6X5I6	291.0	0	PhageMetallopep domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_12	926561.KB900624_gene2638	66.6	0.0000000000132	N/A	N/A
Pfam	UHGV-0046218_12	PF18894	N/A	N/A	Putative phage metallopeptidase	PhageMetallopep
structural_annotation	UHGV-0046218_12	PF18894,COG4900	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_13	1203554.HMPREF1476_00247	55.5	0.000000031	N/A	N/A
PHROG	UHGV-0046218_14	phrog_30251	645.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0046218_14	UniRef90_UPI001F2335B1	648.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0046218_14	1499683.CCFF01000014_gene3915	602.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0046218_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0046218_14	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0046218_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046218_14	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_15	phrog_145	151.2	2.8026e-45	portal protein	head and packaging
UniRef90	UHGV-0046218_15	UniRef90_R6WQ48	905.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0046218_15	1232428.CAVO010000021_gene806	324.0	0	N/A	N/A
structural_annotation	UHGV-0046218_15	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_16	phrog_1657	94.0	1.7e-29	head morphogenesis	head and packaging
UniRef90	UHGV-0046218_16	UniRef90_R6AE12	398.0	0	TNT domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_16	1232428.CAVO010000021_gene805	280.0	0	N/A	N/A
KOfam	UHGV-0046218_18	K07341	92.4	5.5e-27	doc; death on curing protein	N/A
PHROG	UHGV-0046218_18	phrog_577	55.5	4.6e-16	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0046218_18	UniRef90_R6WQY0	614.0	0	Fido domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_18	1262914.BN533_02097	418.0	0	N/A	N/A
Pfam	UHGV-0046218_18	PF13310	N/A	N/A	Virulence protein RhuM family	Virulence_RhuM
Pfam	UHGV-0046218_18	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-0046218_18	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
structural_annotation	UHGV-0046218_18	PF09669,TIGR01550,TIGR02681,COG3943	N/A	N/A	N/A	N/A
UniRef90	UHGV-0046218_19	UniRef90_R6WZ40	399.0	0	TNT domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_19	1321786.HMPREF1992_00832	133.0	2.42e-36	self proteolysis	N/A
Pfam	UHGV-0046218_19	PF14021	N/A	N/A	Tuberculosis necrotizing toxin	TNT
COG	UHGV-0046218_19	COG3209	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_21	1280706.AUJE01000003_gene2260	109.0	2.36e-26	N/A	N/A
PHROG	UHGV-0046218_22	phrog_422	218.3	0	major head protein	head and packaging
UniRef90	UHGV-0046218_22	UniRef90_R6WWZ7	538.0	0	Gp7	N/A
eggNOG-mapper	UHGV-0046218_22	1352230.S6AVV3_9CAUD	349.0	0	N/A	N/A
NCBIFam	UHGV-0046218_22	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0046218_22	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_23	phrog_5	47.2	0.00000000000064	tail completion or Neck1 protein	connector
UniRef90	UHGV-0046218_23	UniRef90_F9MMJ2	94.7	6.9e-22	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0046218_23	568816.Acin_1234	112.0	1.65e-29	N/A	N/A
structural_annotation	UHGV-0046218_23	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_24	1111454.HMPREF1250_1049	70.9	0.0000000000000516	N/A	N/A
UniRef90	UHGV-0046218_25	UniRef90_R6WK09	261.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0046218_25	1280706.AUJE01000003_gene2256	71.2	0.0000000000000514	N/A	N/A
structural_annotation	UHGV-0046218_25	PF08873,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_26	phrog_1407	156.6	0	major tail protein	tail
UniRef90	UHGV-0046218_26	UniRef90_R6X5G0	311.0	0	Phage major tail protein TP901-1 family	N/A
eggNOG-mapper	UHGV-0046218_26	568816.Acin_1911	254.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0046218_26	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0046218_26	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0046218_26	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0046218_26	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_27	1123288.SOV_2c03540	65.5	0.00000000000419	N/A	N/A
structural_annotation	UHGV-0046218_27	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_29	phrog_12798	171.6	0	N/A	unknown function
UniRef90	UHGV-0046218_29	UniRef90_R6WQ18	1724.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_29	2754.EH55_13250	191.0	0	tape measure	N/A
Pfam	UHGV-0046218_29	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0046218_29	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0046218_29	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0046218_29	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_30	phrog_2913	61.1	1.3e-17	glycoside hydrolase	other
eggNOG-mapper	UHGV-0046218_30	592028.GCWU000321_01387	90.5	3.5e-20	N/A	N/A
Pfam	UHGV-0046218_30	PF09343	N/A	N/A	N/A	DUF2460
COG	UHGV-0046218_30	COG5448	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046218_30	PF09343,TIGR02217,COG5448	N/A	N/A	N/A	N/A
UniRef90	UHGV-0046218_31	UniRef90_R6WK00	395.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046218_31	592028.GCWU000321_01388	139.0	8.56e-39	N/A	N/A
Pfam	UHGV-0046218_31	PF09931	N/A	N/A	N/A	DUF2163
COG	UHGV-0046218_31	COG5449	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046218_31	PF09931,TIGR01600,COG4672	N/A	N/A	N/A	N/A
KOfam	UHGV-0046218_32	K13695	47.2	0.00000000000027	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-0046218_32	phrog_329	54.2	0.0000000000000017	minor tail protein	tail
UniRef90	UHGV-0046218_32	UniRef90_R6XZ04	320.0	0	Cell wall-associated hydrolase	N/A
Pfam	UHGV-0046218_32	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0046218_32	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0046218_32	PF00877,TIGR02219,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_33	phrog_1101	291.8	0	tail protein	tail
UniRef90	UHGV-0046218_33	UniRef90_R6X5E9	2187.0	0	Phage-tail_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_33	592028.GCWU000321_01390	808.0	0	Putative phage tail protein	N/A
Pfam	UHGV-0046218_33	PF13550	N/A	N/A	Putative phage tail protein	Phage-tail_3
COG	UHGV-0046218_33	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046218_33	PF13550,PF02010,MF_04116,NF040662,NF040520,COG4733	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_34	phrog_2427	41.7	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0046218_36	910314.HMPREF9220_1078	107.0	1.07e-28	N/A	N/A
structural_annotation	UHGV-0046218_36	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0046218_37	428125.CLOLEP_01433	62.8	0.0000000000155	N/A	N/A
PHROG	UHGV-0046218_38	phrog_13589	213.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0046218_38	742733.HMPREF9469_05009	269.0	0	N/A	N/A
PHROG	UHGV-0046218_40	phrog_2837	63.6	4.1e-18	tail protein	tail
UniRef90	UHGV-0046218_40	UniRef90_R6WJZ0	319.0	0	N/A	N/A
eggNOG-mapper	UHGV-0046218_40	1286631.X805_38770	54.7	0.00000102	N/A	N/A
Pfam	UHGV-0046218_40	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0046218_40	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_41	phrog_199	40.9	0.000000000013	holin	lysis
UniRef90	UHGV-0046218_41	UniRef90_R6X5E0	317.0	0	Holin domain protein	N/A
eggNOG-mapper	UHGV-0046218_41	936573.HMPREF1147_1740	102.0	5.69e-25	Bacteriophage holin family	N/A
Pfam	UHGV-0046218_41	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-0046218_41	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0046218_42	K08640	112.2	7.2e-33	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0046218_42	phrog_894	92.0	8.5e-27	endolysin	lysis
UniRef90	UHGV-0046218_42	UniRef90_A0A1Q6R3X6	251.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_42	1121423.JONT01000035_gene915	115.0	8.56e-31	N/A	N/A
Pfam	UHGV-0046218_42	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0046218_42	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0046218_42	PF08291,NF000086,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0046218_44	phrog_11900	85.0	7.5e-25	N/A	unknown function
UniRef90	UHGV-0046218_44	UniRef90_A0A2N0UW35	562.0	0	Fido domain-containing protein	N/A
eggNOG-mapper	UHGV-0046218_44	1235799.C818_03247	588.0	0	Fic/DOC family	N/A
Pfam	UHGV-0046218_44	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-0046218_44	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-0046218_44	PF02661,PF20586,TIGR02613,COG3177	N/A	N/A	N/A	N/A
KOfam	UHGV-0046218_45	K01305	487.5	0	iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]	N/A
UniRef90	UHGV-0046218_45	UniRef90_R6XYY7	769.0	0	Isoaspartyl dipeptidase	N/A
eggNOG-mapper	UHGV-0046218_45	626939.HMPREF9443_00078	485.0	0	Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation	N/A
Pfam	UHGV-0046218_45	PF01979	N/A	N/A	Amidohydrolase family	Amidohydro_1
NCBIFam	UHGV-0046218_45	TIGR01975.1	N/A	N/A	beta-aspartyl-peptidase	N/A
COG	UHGV-0046218_45	COG0044	N/A	N/A	Dihydroorotase or related cyclic amidohydrolase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0046218	Yes	32,729	46	83	1