vOTU vOTU-121711

vOTU: vOTU-121711

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-121711
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vOTU-121711
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1906972
Biosample ID	N/A
Genome length (bp)	20,812 bps
CheckV completeness	50.43% (Medium-quality)
CDS count	42
CDS density	86.76%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	226	Host agreement	85.84
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	14	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 50.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1906972_1	1410650.JHWL01000003_gene2827	127.0	2.69e-30	N/A	N/A
structural_annotation	UHGV-1906972_1	PF12195	N/A	N/A	N/A	N/A
UniRef90	UHGV-1906972_2	UniRef90_R5IS22	279.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1906972_2	1410650.JHWL01000003_gene2834	230.0	0	N/A	N/A
COG	UHGV-1906972_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
KOfam	UHGV-1906972_3	K06909	115.8	4.1e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1906972_3	phrog_979	135.6	1.40004e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1906972_3	UniRef90_A0A3D5TIM8	402.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1906972_3	1410650.JHWL01000003_gene2834	383.0	0	N/A	N/A
Pfam	UHGV-1906972_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1906972_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1906972_4	phrog_606	69.0	6.7e-20	terminase small subunit	head and packaging
UniRef90	UHGV-1906972_4	UniRef90_UPI001F487344	127.0	4.84e-35	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1906972_4	397290.C810_05185	126.0	5.65e-35	DNA-packaging protein gp3	N/A
Pfam	UHGV-1906972_4	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1906972_4	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_5	phrog_3584	112.6	3.1e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1906972_5	537013.CLOSTMETH_02141	67.8	0.0000000000457	N/A	N/A
structural_annotation	UHGV-1906972_5	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_6	phrog_2245	88.8	5.3e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1906972_6	UniRef90_A0A4U9RLZ8	64.7	0.000000000118	N/A	N/A
eggNOG-mapper	UHGV-1906972_6	706433.HMPREF9430_01279	65.5	0.0000000000122	N/A	N/A
structural_annotation	UHGV-1906972_6	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_8	phrog_374	66.1	6.5e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1906972_8	UniRef90_A0A0R2A6E6	65.9	0.0000000000423	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-1906972_8	1423807.BACO01000037_gene1103	63.2	0.000000000096	N/A	N/A
PHROG	UHGV-1906972_10	phrog_190	101.0	1.1e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1906972_10	UniRef90_UPI0006C2AC63	124.0	2.84e-33	N/A	N/A
eggNOG-mapper	UHGV-1906972_10	1226322.HMPREF1545_00295	116.0	5.37e-31	N/A	N/A
Pfam	UHGV-1906972_10	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1906972_10	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_14	phrog_3136	135.7	1.4e-40	N/A	unknown function
UniRef90	UHGV-1906972_14	UniRef90_A0A843H9M8	100.0	4.89e-23	ASCH domain-containing protein	N/A
COG	UHGV-1906972_14	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1906972_14	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-1906972_15	UniRef90_UPI001C10265C	98.2	3.46e-24	N/A	N/A
Pfam	UHGV-1906972_15	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1906972_15	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1906972_19	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1906972_20	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1906972_22	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-1906972_27	K22300	58.5	1.5e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1906972_27	phrog_8	49.0	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1906972_27	UniRef90_A0A844DFR0	119.0	5.46e-32	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1906972_27	748224.HMPREF9436_01444	115.0	2.91e-31	N/A	N/A
Pfam	UHGV-1906972_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1906972_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1906972_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1906972_28	471855.Shel_04260	62.8	0.0000000606	dextransucrase activity	N/A
COG	UHGV-1906972_28	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
Pfam	UHGV-1906972_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1906972_30	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1906972_31	K14059	206.8	0	int; integrase	N/A
PHROG	UHGV-1906972_31	phrog_1	198.0	0	integrase	integration and excision
UniRef90	UHGV-1906972_31	UniRef90_A0A8F2JBJ7	253.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1906972_31	1507.HMPREF0262_00307	200.0	0	Phage integrase family	N/A
Pfam	UHGV-1906972_31	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1906972_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1906972_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1906972_31	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1906972_32	UniRef90_A0A8F0WD75	79.7	0.00000000000000148	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1906972_32	1378168.N510_03079	70.9	0.00000000000153	N/A	N/A
KOfam	UHGV-1906972_35	K19167	109.0	5.5e-32	abiQ; protein AbiQ	N/A
PHROG	UHGV-1906972_35	phrog_9764	116.2	2.2e-34	N/A	unknown function
UniRef90	UHGV-1906972_35	UniRef90_A0A845R8D8	214.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-1906972_35	1519439.JPJG01000060_gene1906	177.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-1906972_35	AbiQ	134.3	1.3e-39	AbiQ	Abi
Pfam	UHGV-1906972_35	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-1906972_35	PF13958	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_37	phrog_14030	135.5	3.3e-40	N/A	unknown function
UniRef90	UHGV-1906972_37	UniRef90_R6LL81	234.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1906972_37	1121866.AUGK01000003_gene1444	94.7	1.47e-19	amidase activity	N/A
COG	UHGV-1906972_37	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1906972_38	phrog_6918	95.4	3.6e-28	holin	lysis
UniRef90	UHGV-1906972_38	UniRef90_A0A316QCY7	101.0	9.93e-26	Holin	N/A
eggNOG-mapper	UHGV-1906972_38	1297617.JPJD01000020_gene301	99.8	6.94e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1906972_38	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1906972_38	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1906972_40	1232443.BAIA02000106_gene3111	48.9	0.00000932	N/A	N/A
PHROG	UHGV-1906972_41	phrog_37900	73.0	3.2e-23	N/A	unknown function
UniRef90	UHGV-1906972_41	UniRef90_R5IRZ6	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-1906972_41	1519439.JPJG01000060_gene1894	206.0	0	N/A	N/A
Pfam	UHGV-1906972_41	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1906972_41	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1906972_41	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
PHROG	UHGV-1906972_42	phrog_5073	40.1	0.000000000039	tail fiber protein	tail
Pfam	UHGV-1906972_42	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1906972	Yes	20,812	57	50	1