vOTU vOTU-121897

vOTU: vOTU-121897

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-121897
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-07550 → vGENUS-21020 → vOTU-121897
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → UMGS882 → UMGS882 sp900546385
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0174382
Biosample ID	SAMN09781789
Genome length (bp)	33,934 bps
CheckV completeness	88.69% (Medium-quality)
CDS count	55
CDS density	94.16%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-382 → UMGS882 → UMGS882 sp900546385	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.69)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0174382_1	877411.JMMA01000002_gene2284	60.5	0.0000000514	DnaD domain protein	N/A
Pfam	UHGV-0174382_1	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
COG	UHGV-0174382_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0174382_3	K01160	43.4	0.0000000000093	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0174382_3	phrog_1682	69.9	4.1e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174382_3	UniRef90_A0A6S6XJK5	102.0	9.69e-26	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0174382_3	428125.CLOLEP_01819	99.0	5.76e-25	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0174382_3	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0174382_3	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0174382_6	K14056	60.4	3.4e-17	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0174382_6	phrog_8	66.2	8.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0174382_6	UniRef90_A0A265E863	64.7	0.000000000119	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0174382_6	1095726.HMPREF1116_1247	63.9	0.000000000543	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0174382_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0174382_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0174382_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_7	phrog_478	130.3	7.9e-39	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0174382_7	UniRef90_R6E548	160.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0174382_7	1111121.HMPREF1247_0834	99.8	3.84e-25	N/A	N/A
PHROG	UHGV-0174382_8	phrog_13321	60.8	1.2e-17	N/A	unknown function
UniRef90	UHGV-0174382_8	UniRef90_UPI00030D2C45	306.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-0174382_8	1007096.BAGW01000031_gene122	306.0	0	PFAM Radical SAM	N/A
COG	UHGV-0174382_8	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0174382_8	PF20903,MF_00917,NF033668,COG4422	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174382_10	1226322.HMPREF1545_00288	54.3	0.000000033	N/A	N/A
PHROG	UHGV-0174382_11	phrog_21498	243.4	0	N/A	unknown function
UniRef90	UHGV-0174382_11	UniRef90_C7MM70	213.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0174382_11	469378.Ccur_02830	213.0	0	DNA binding	N/A
COG	UHGV-0174382_11	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0174382_11	PF05869,TIGR01712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174382_12	931276.Cspa_c57180	55.1	0.000000119	DNA-packaging protein gp3	N/A
KOfam	UHGV-0174382_13	K06909	65.9	4.8e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0174382_13	phrog_2	73.7	4e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0174382_13	UniRef90_UPI00137A4D1F	468.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0174382_13	411902.CLOBOL_00139	399.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0174382_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0174382_13	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_14	phrog_533	173.5	0	portal protein	head and packaging
UniRef90	UHGV-0174382_14	UniRef90_A0A136WBU7	243.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0174382_14	397291.C804_01614	62.0	0.000000203	phage minor capsid protein	N/A
Pfam	UHGV-0174382_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0174382_14	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_15	phrog_581	160.3	0	minor head protein	head and packaging
UniRef90	UHGV-0174382_15	UniRef90_A0A1C6B625	230.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0174382_15	693746.OBV_18050	186.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0174382_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0174382_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174382_15	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174382_16	UniRef90_A0A7T3RDX5	74.7	0.000000000000181	Phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0174382_16	536233.CLO_0885	58.2	0.0000000572	Phage minor structural protein GP20	N/A
Pfam	UHGV-0174382_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0174382_17	phrog_422	247.5	0	major head protein	head and packaging
UniRef90	UHGV-0174382_17	UniRef90_A0A345MKD0	389.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0174382_17	1160721.RBI_II00538	389.0	0	N/A	N/A
structural_annotation	UHGV-0174382_17	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_19	phrog_541	73.1	4e-21	head-tail adaptor	connector
PHROG	UHGV-0174382_20	phrog_3366	73.9	2.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0174382_20	573061.Clocel_3539	58.2	0.0000000078	N/A	N/A
structural_annotation	UHGV-0174382_20	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_21	phrog_556	65.2	1e-18	minor head protein	head and packaging
UniRef90	UHGV-0174382_21	UniRef90_UPI00156EFCF3	53.9	0.00000184	minor capsid protein	N/A
eggNOG-mapper	UHGV-0174382_21	169963.lmo2293	57.4	0.00000000772	Minor capsid protein	N/A
Pfam	UHGV-0174382_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0174382_21	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_22	phrog_3266	55.4	0.0000000000000011	tail completion	connector
structural_annotation	UHGV-0174382_22	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_23	phrog_3099	79.1	6.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0174382_23	665956.HMPREF1032_03060	159.0	0	N/A	N/A
structural_annotation	UHGV-0174382_23	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_24	phrog_11299	43.6	0.0000000000057	N/A	unknown function
PHROG	UHGV-0174382_25	phrog_706	83.5	2.9e-24	N/A	unknown function
UniRef90	UHGV-0174382_25	UniRef90_A0A2U1BEN4	130.0	1.06e-34	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0174382_25	665956.HMPREF1032_03058	124.0	2.77e-33	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0174382_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0174382_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_26	phrog_1535	131.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0174382_26	693746.OBV_18190	98.2	6.08e-18	domain protein	N/A
COG	UHGV-0174382_26	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174382_26	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_27	phrog_1194	77.0	2.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0174382_27	1120998.AUFC01000030_gene2246	113.0	4.49e-29	N/A	N/A
structural_annotation	UHGV-0174382_27	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_29	phrog_8147	42.2	0.0000000000065	tail fiber protein	tail
PHROG	UHGV-0174382_31	phrog_4105	73.5	2.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0174382_31	397288.C806_00056	80.9	2.17e-18	N/A	N/A
eggNOG-mapper	UHGV-0174382_33	642492.Clole_0840	86.7	2.14e-21	N/A	N/A
KOfam	UHGV-0174382_34	K19304	112.6	5.4e-33	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0174382_34	phrog_7767	89.3	4.9e-26	metallo-endopeptidase	other
UniRef90	UHGV-0174382_34	UniRef90_A0A2V2G827	192.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0174382_34	665956.HMPREF1032_00102	95.9	3.74e-21	heme binding	N/A
Pfam	UHGV-0174382_34	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0174382_34	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-0174382_35	UniRef90_A0A843IZ65	87.4	3.04e-21	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0174382_35	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_37	phrog_16490	76.3	6.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0174382_37	641112.ACOK01000103_gene525	132.0	7.32e-36	N/A	N/A
structural_annotation	UHGV-0174382_38	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174382_39	PF02255,TIGR00823,COG1447	N/A	N/A	N/A	N/A
KOfam	UHGV-0174382_40	K14059	209.7	0	int; integrase	N/A
PHROG	UHGV-0174382_40	phrog_1	187.9	0	integrase	integration and excision
UniRef90	UHGV-0174382_40	UniRef90_UPI0019610FE2	259.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0174382_40	742738.HMPREF9460_01344	247.0	0	Phage integrase family	N/A
Pfam	UHGV-0174382_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174382_40	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0174382_40	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_41	phrog_8545	64.0	2.1e-18	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0174382_41	UniRef90_A0A369BJU3	82.8	4.04e-16	Putative nucleic acid binding protein	N/A
eggNOG-mapper	UHGV-0174382_41	1163671.JAGI01000002_gene1135	55.1	0.00000163	tRNA_anti-like	N/A
Pfam	UHGV-0174382_41	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0174382_41	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_42	phrog_8	44.1	0.0000000000041	transcriptional regulator	transcription regulation
UniRef90	UHGV-0174382_42	UniRef90_UPI000C7A7EF1	77.0	0.00000000000000145	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0174382_42	665950.HMPREF1025_02561	50.1	0.00000105	sequence-specific DNA binding	N/A
Pfam	UHGV-0174382_42	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0174382_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0174382_42	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174382_47	1403313.AXBR01000018_gene3548	48.5	0.00000682	Cell division suppressor protein YneA	N/A
COG	UHGV-0174382_47	COG1388	N/A	N/A	LysM repeat	N/A
eggNOG-mapper	UHGV-0174382_49	1235802.C823_04724	94.4	9.84e-20	N/A	N/A
KOfam	UHGV-0174382_50	K07455	150.4	2.24208e-44	recT; recombination protein RecT	N/A
PHROG	UHGV-0174382_50	phrog_148	168.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174382_50	UniRef90_C6JQL9	200.0	0	Recombinase, phage RecT family	N/A
eggNOG-mapper	UHGV-0174382_50	469618.FVAG_00771	200.0	0	RecT family	N/A
Pfam	UHGV-0174382_50	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0174382_50	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0174382_50	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0174382_50	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_51	phrog_1227	266.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174382_51	UniRef90_A0A1Y3RPZ6	320.0	0	N/A	N/A
eggNOG-mapper	UHGV-0174382_51	1567013.A0A0A7RVR3_9CAUD	187.0	0	N/A	N/A
Pfam	UHGV-0174382_51	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-0174382_51	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174382_52	PF19561	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_53	phrog_398	188.0	0	N/A	unknown function
UniRef90	UHGV-0174382_53	UniRef90_UPI000489F9F0	163.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0174382_53	1485543.JMME01000021_gene802	163.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0174382_53	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0174382_53	PF16784	N/A	N/A	N/A	N/A
KOfam	UHGV-0174382_54	K03111	145.8	4.49817e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0174382_54	phrog_44	147.3	7.56701e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174382_54	UniRef90_A0A2V2G341	179.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0174382_54	1507.HMPREF0262_03706	121.0	9.49e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0174382_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0174382_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0174382_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0174382_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0174382_54	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0174382_55	phrog_2514	56.7	4.3e-16	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0174382_55	663278.Ethha_2489	90.5	1.06e-18	N/A	N/A
Pfam	UHGV-0174382_55	PF07848	N/A	N/A	PaaX-like protein	PaaX

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0174382	Yes	33,934	47	89	1
UHGV-0204543	No	33,880	47	89	1