vOTU vOTU-122069

vOTU: vOTU-122069

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-122069
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00627 → vOTU-122069
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1490185
Biosample ID	N/A
Genome length (bp)	27,856 bps
CheckV completeness	52.07% (Medium-quality)
CDS count	58
CDS density	86.00%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285	Total connections	31	Host agreement	87.1
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1490185_1	phrog_13890	53.3	0.0000000000000018	N/A	unknown function
UniRef90	UHGV-1490185_1	UniRef90_A0A316SBZ9	54.7	0.0000000745	Antitoxin	N/A
structural_annotation	UHGV-1490185_1	COG4226	N/A	N/A	N/A	N/A
COG	UHGV-1490185_4	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1490185_5	PF19129,NF007348,COG5569	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_12	phrog_25567	47.5	0.00000000000024	N/A	unknown function
eggNOG-mapper	UHGV-1490185_12	888727.HMPREF9092_1413	53.9	0.0000000573	Helix-turn-helix	N/A
COG	UHGV-1490185_12	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1490185_12	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1490185_13	596152.DesU5LDRAFT_1910	84.7	1.5e-17	N/A	N/A
structural_annotation	UHGV-1490185_13	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-1490185_18	K18830	48.6	0.00000000000017	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1490185_18	phrog_8	43.6	0.0000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-1490185_18	UniRef90_UPI00156FD326	104.0	2.47e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1490185_18	1235790.C805_00012	91.7	3.84e-22	Helix-turn-helix domain	N/A
Pfam	UHGV-1490185_18	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1490185_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1490185_18	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1490185_22	PF07083	N/A	N/A	N/A	DUF1351
PHROG	UHGV-1490185_23	phrog_2760	172.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1490185_23	UniRef90_UPI0019154C91	204.0	0	phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1490185_23	1122173.AXVL01000068_gene1414	182.0	0	DNA synthesis involved in double-strand break repair via homologous recombination	N/A
Pfam	UHGV-1490185_23	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1490185_23	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1490185_23	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1490185_23	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1490185_24	PF13744,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_25	phrog_270	88.2	1.2e-25	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1490185_25	1423724.BAMM01000020_gene1808	77.0	0.000000000000242	N/A	N/A
COG	UHGV-1490185_25	COG3756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1490185_25	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_26	phrog_9804	103.2	2.4e-30	N/A	unknown function
UniRef90	UHGV-1490185_26	UniRef90_R6LQQ5	114.0	2.64e-28	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1490185_26	1499683.CCFF01000013_gene503	82.8	4.56e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1490185_26	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1490185_26	PF11417	N/A	N/A	N/A	N/A
UniRef90	UHGV-1490185_31	UniRef90_A0A0A7I2M5	51.6	0.00000363	Peptidase U32	N/A
KOfam	UHGV-1490185_32	K01520	132.7	3e-39	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1490185_32	phrog_135	113.7	1.3e-33	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1490185_32	UniRef90_R6ILQ3	147.0	6.69821e-43	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1490185_32	1282887.AUJG01000016_gene1113	139.0	1.68e-39	N/A	N/A
Pfam	UHGV-1490185_32	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1490185_32	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1490185_32	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1490185_32	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1490185_33	PF04319,PF08962	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_34	phrog_757	208.7	0	DNA methyltransferase	other
UniRef90	UHGV-1490185_34	UniRef90_A0A355KVL2	344.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1490185_34	748224.HMPREF9436_03069	341.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1490185_34	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1490185_34	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1490185_36	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_39	phrog_19831	44.6	0.0000000000019	N/A	unknown function
UniRef90	UHGV-1490185_39	UniRef90_E9SEU0	67.0	0.0000000000226	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1490185_39	246199.CUS_4828	67.0	0.0000000000038	N/A	N/A
KOfam	UHGV-1490185_48	K01160	47.1	0.00000000000066	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1490185_48	phrog_4632	46.8	0.000000000000053	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1490185_48	UniRef90_A0A1V5ZUM0	110.0	9.27e-29	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1490185_48	556263.FSEG_00477	67.4	0.000000000000899	N/A	N/A
structural_annotation	UHGV-1490185_48	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_50	phrog_474	77.5	3e-22	phosphofructokinase	other
UniRef90	UHGV-1490185_50	UniRef90_UPI00195F5FF7	99.8	5.72e-25	N/A	N/A
eggNOG-mapper	UHGV-1490185_50	1095750.HMPREF9970_1026	76.6	1.08e-16	N/A	N/A
Pfam	UHGV-1490185_50	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1490185_50	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_53	phrog_200	71.5	4.9e-22	lipoprotein	other
Pfam	UHGV-1490185_53	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
KOfam	UHGV-1490185_54	K03111	122.2	6.8e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1490185_54	phrog_44	120.7	1.3e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1490185_54	UniRef90_A0A7C6GL00	152.0	8.40779e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1490185_54	1232443.BAIA02000073_gene513	119.0	9.39e-33	Single-strand binding protein family	N/A
Pfam	UHGV-1490185_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1490185_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1490185_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1490185_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1490185_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1490185_57	PF20063,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1490185_58	phrog_4402	158.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1490185_58	UniRef90_A0A3A9E5A5	189.0	0	RepB family plasmid replication initiator protein	N/A
eggNOG-mapper	UHGV-1490185_58	1395513.P343_18240	167.0	0	Protein involved in initiation of plasmid replication	N/A
Pfam	UHGV-1490185_58	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1490185_58	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1490185_58	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1490185_58	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1490185	Yes	27,856	46	52	1
UHGV-1447518	No	27,820	46	52	1