vOTU vOTU-122615

vOTU: vOTU-122615

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-122615
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00181 → vOTU-122615
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1426535
Biosample ID	SAMEA4545316
Genome length (bp)	23,113 bps
CheckV completeness	54.58% (Medium-quality)
CDS count	43
CDS density	93.56%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	85	Host agreement	94.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1426535_1	phrog_11157	89.3	1.1e-26	N/A	unknown function
UniRef90	UHGV-1426535_1	UniRef90_UPI00082DD5F9	118.0	9.73e-30	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1426535_1	1256908.HMPREF0373_00674	136.0	5.33e-37	N/A	N/A
COG	UHGV-1426535_1	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
PHROG	UHGV-1426535_3	phrog_13879	249.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1426535_3	1226322.HMPREF1545_00061	493.0	0	N/A	N/A
structural_annotation	UHGV-1426535_3	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_4	phrog_1194	60.0	3.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1426535_4	1226322.HMPREF1545_00060	239.0	0	N/A	N/A
structural_annotation	UHGV-1426535_4	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1426535_5	K03529	43.8	0.0000000000012	smc; chromosome segregation protein	N/A
PHROG	UHGV-1426535_5	phrog_1535	125.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1426535_5	UniRef90_A0A810PX76	317.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1426535_5	1235797.C816_04182	251.0	0	SLT domain	N/A
COG	UHGV-1426535_5	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426535_5	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_6	phrog_806	85.5	6.2e-25	N/A	unknown function
UniRef90	UHGV-1426535_6	UniRef90_A0A212ITM5	218.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-1426535_6	476272.RUMHYD_01730	163.0	0	N/A	N/A
Pfam	UHGV-1426535_6	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1426535_6	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1426535_6	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_7	phrog_706	117.6	9.7e-35	N/A	unknown function
UniRef90	UHGV-1426535_7	UniRef90_UPI000682A80B	222.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1426535_7	693746.OBV_18170	213.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1426535_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1426535_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_8	phrog_11299	72.5	6.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1426535_8	693746.OBV_18160	143.0	3.09967e-42	N/A	N/A
structural_annotation	UHGV-1426535_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_9	phrog_3099	91.4	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1426535_9	1226322.HMPREF1545_00056	246.0	0	N/A	N/A
structural_annotation	UHGV-1426535_9	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_10	phrog_3266	61.8	1e-17	tail completion	connector
UniRef90	UHGV-1426535_10	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1426535_10	1232443.BAIA02000078_gene24	185.0	0	N/A	N/A
structural_annotation	UHGV-1426535_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_11	phrog_556	77.0	2.1e-22	minor head protein	head and packaging
UniRef90	UHGV-1426535_11	UniRef90_UPI00195E1497	183.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1426535_11	1226322.HMPREF1545_00054	156.0	0	Minor capsid protein	N/A
Pfam	UHGV-1426535_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1426535_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_12	phrog_3366	90.7	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1426535_12	1226322.HMPREF1545_00053	153.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1426535_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_13	phrog_541	109.2	2.3e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1426535_13	642492.Clole_0822	68.6	0.000000000000716	N/A	N/A
PHROG	UHGV-1426535_14	phrog_10	171.8	0	major head protein	head and packaging
UniRef90	UHGV-1426535_14	UniRef90_A0A2U1BEF2	521.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1426535_14	1226322.HMPREF1545_00050	480.0	0	Phage capsid family	N/A
Pfam	UHGV-1426535_14	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1426535_14	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1426535_14	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1426535_14	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_15	phrog_2303	48.8	0.000000000000097	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1426535_15	1226322.HMPREF1545_00049	155.0	0	N/A	N/A
structural_annotation	UHGV-1426535_16	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_18	phrog_581	278.8	0	minor head protein	head and packaging
UniRef90	UHGV-1426535_18	UniRef90_A0A1C5N7V1	542.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1426535_18	1226322.HMPREF1545_00046	368.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1426535_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1426535_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426535_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_19	phrog_533	361.7	0	portal protein	head and packaging
UniRef90	UHGV-1426535_19	UniRef90_UPI0006C81717	692.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1426535_19	1226322.HMPREF1545_00044	624.0	0	N/A	N/A
Pfam	UHGV-1426535_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1426535_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1426535_20	K06909	379.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1426535_20	phrog_3717	158.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1426535_20	UniRef90_A0A2U1BEH4	720.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1426535_20	33035.JPJF01000106_gene3136	451.0	0	Terminase small subunit	N/A
Pfam	UHGV-1426535_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1426535_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1426535_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1426535_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1426535_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_21	phrog_606	93.3	2.3e-27	terminase small subunit	head and packaging
UniRef90	UHGV-1426535_21	UniRef90_UPI00195648BB	171.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1426535_21	445972.ANACOL_01838	153.0	1.4013e-45	DNA-packaging protein gp3	N/A
Pfam	UHGV-1426535_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1426535_22	K22299	47.4	0.00000000000044	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1426535_22	phrog_8	64.7	1.9e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1426535_22	UniRef90_A0A8D9PDC4	152.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-1426535_22	1226322.HMPREF1545_00039	79.0	1.69e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-1426535_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1426535_22	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1426535_22	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_24	phrog_22543	43.2	0.0000000000067	N/A	unknown function
UniRef90	UHGV-1426535_24	UniRef90_A0A8D9PDT5	146.0	2.53635e-43	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-1426535_27	phrog_22543	40.1	0.000000000045	N/A	unknown function
UniRef90	UHGV-1426535_27	UniRef90_A0A8D9PDK2	69.3	0.000000000000326	Zinc-ribbon containing domain	N/A
UniRef90	UHGV-1426535_29	UniRef90_A0A8D9PDQ6	144.0	5.32493e-44	Restriction alleviation protein	N/A
Pfam	UHGV-1426535_29	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1426535_29	PF14354,TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426535_32	UniRef90_A0A8D9PDK1	109.0	1.01e-28	Anti-repressor	N/A
KOfam	UHGV-1426535_35	K07319	80.9	1.8e-23	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1426535_35	phrog_67	72.2	4.2e-21	DNA methyltransferase	other
UniRef90	UHGV-1426535_35	UniRef90_A0A8D9PDC5	341.0	0	Adenine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1426535_35	411154.GFO_2469	162.0	0	DNA methylase	N/A
PADLOC	UHGV-1426535_35	MTase_II_00172	140.7	9.99967e-42	Type II methyltransferase	RM
Pfam	UHGV-1426535_35	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1426535_35	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-1426535_36	phrog_190	97.2	1.6e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426535_36	UniRef90_A0A8D9PDD6	253.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1426535_36	862517.HMPREF9225_1657	73.9	0.00000000000000488	N/A	N/A
Pfam	UHGV-1426535_36	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1426535_36	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_38	phrog_15768	107.8	2.8e-33	N/A	unknown function
UniRef90	UHGV-1426535_38	UniRef90_A0A8D9PDU3	313.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426535_38	203119.Cthe_2466	84.3	2.04e-16	N/A	N/A
Pfam	UHGV-1426535_38	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1426535_38	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1426535_39	K03111	130.0	2.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1426535_39	phrog_44	126.8	1.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426535_39	UniRef90_A0A8D9PDS7	251.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1426535_39	1203606.HMPREF1526_01880	111.0	1.05e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1426535_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1426535_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1426535_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1426535_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1426535_39	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1426535_40	phrog_20891	61.7	1.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426535_40	UniRef90_UPI0013794BCD	238.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1426535_40	1052673.G1FGL3_9CAUD	58.5	0.000000073	HNH endonuclease	N/A
Pfam	UHGV-1426535_40	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1426535_40	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
PHROG	UHGV-1426535_41	phrog_7566	94.9	4.9e-28	N/A	unknown function
UniRef90	UHGV-1426535_41	UniRef90_A0A8D9UHC0	142.0	1.46015e-42	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1426535_41	1007096.BAGW01000031_gene114	139.0	1.54003e-41	N/A	N/A
eggNOG-mapper	UHGV-1426535_43	445972.ANACOL_01825	60.5	0.0000000000952	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1426535	Yes	23,113	53	55	1