vOTU vOTU-122699

vOTU: vOTU-122699

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-122699
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-01735 → vOTU-122699
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter torques
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2200129
Biosample ID	N/A
Genome length (bp)	32,171 bps
CheckV completeness	53.76% (Medium-quality)
CDS count	45
CDS density	94.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter torques	Total connections	29	Host agreement	89.66
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter torques	Total connections	270	Host agreement	94.07

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2200129_2	UniRef90_A0A1C5WLL2	237.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_2	411469.EUBHAL_03100	54.3	0.00000563	N/A	N/A
Pfam	UHGV-2200129_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-2200129_2	PF13443,PF00717,MF_00015,NF041951,TIGR02228,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_3	phrog_30034	86.3	3.6e-25	N/A	unknown function
UniRef90	UHGV-2200129_3	UniRef90_R6ELD6	65.9	0.000000000472	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-2200129_3	1122971.BAME01000151_gene6566	117.0	8.81e-30	N/A	N/A
eggNOG-mapper	UHGV-2200129_4	411470.RUMGNA_02215	168.0	2.8026e-44	N/A	N/A
eggNOG-mapper	UHGV-2200129_5	619693.HMPREF6745_2540	63.5	0.000000000622	domain, Protein	N/A
COG	UHGV-2200129_5	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-2200129_7	phrog_27545	66.3	3.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-2200129_7	1235799.C818_04237	57.8	0.000000961	N/A	N/A
PHROG	UHGV-2200129_9	phrog_18725	57.9	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-2200129_9	742740.HMPREF9474_03517	76.6	5.04e-16	N/A	N/A
PHROG	UHGV-2200129_10	phrog_13879	200.7	0	N/A	unknown function
eggNOG-mapper	UHGV-2200129_10	742740.HMPREF9474_03516	450.0	0	N/A	N/A
structural_annotation	UHGV-2200129_10	PF03256,PF09096,NF033848,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_11	phrog_13879	64.9	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-2200129_11	1235800.C819_00474	81.6	9.03e-17	N/A	N/A
PHROG	UHGV-2200129_12	phrog_1194	48.9	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-2200129_12	585501.HMPREF6123_0824	78.2	7.77e-17	N/A	N/A
structural_annotation	UHGV-2200129_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_13	phrog_167	365.0	0	tail length tape measure protein	tail
UniRef90	UHGV-2200129_13	UniRef90_UPI001D081BB8	1484.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_13	397290.C810_01419	465.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-2200129_13	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-2200129_13	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-2200129_15	phrog_36112	100.3	1.4e-29	N/A	unknown function
UniRef90	UHGV-2200129_15	UniRef90_A0A8D9PG71	118.0	5.83e-31	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-2200129_15	1298920.KI911353_gene2651	128.0	1.79e-35	N/A	N/A
structural_annotation	UHGV-2200129_15	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2200129_16	476272.RUMHYD_01968	172.0	0	N/A	N/A
structural_annotation	UHGV-2200129_16	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2200129_17	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_18	phrog_5	56.9	4e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-2200129_18	UniRef90_UPI001BBD4500	147.0	3.62936e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2200129_18	397290.C810_01411	201.0	0	N/A	N/A
Pfam	UHGV-2200129_18	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2200129_18	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_20	phrog_1233	76.6	3.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-2200129_20	33035.JPJF01000106_gene3130	86.7	1.42e-20	N/A	N/A
structural_annotation	UHGV-2200129_20	PF13058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2200129_21	1298920.KI911353_gene2656	81.6	7.74e-18	N/A	N/A
KOfam	UHGV-2200129_22	K07273	199.4	0	acm; lysozyme	N/A
PHROG	UHGV-2200129_22	phrog_291	153.8	1.4013e-45	endolysin	lysis
UniRef90	UHGV-2200129_22	UniRef90_A0A173YXL7	594.0	0	N-acetylmuramoyl-L-alanine amidase sle1	N/A
eggNOG-mapper	UHGV-2200129_22	556261.HMPREF0240_01272	269.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-2200129_22	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-2200129_22	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-2200129_22	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-2200129_22	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-2200129_22	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_23	phrog_443	55.6	0.0000000000000015	holin	lysis
UniRef90	UHGV-2200129_23	UniRef90_UPI001C3AE2A9	115.0	4.66e-32	Holin	N/A
eggNOG-mapper	UHGV-2200129_23	476272.RUMHYD_01759	81.6	1.55e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2200129_23	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2200129_23	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_24	phrog_1863	82.5	2.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-2200129_24	1232453.BAIF02000059_gene1610	107.0	8.28e-30	N/A	N/A
eggNOG-mapper	UHGV-2200129_25	411461.DORFOR_01184	59.7	0.000000000177	N/A	N/A
structural_annotation	UHGV-2200129_25	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
KOfam	UHGV-2200129_27	K13276	82.7	2e-24	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-2200129_27	phrog_11157	227.6	0	N/A	unknown function
UniRef90	UHGV-2200129_27	UniRef90_UPI0006C53CD4	478.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_27	742765.HMPREF9457_03368	195.0	0	N/A	N/A
Pfam	UHGV-2200129_27	PF17957	N/A	N/A	Bacterial Ig domain	Big_7
Pfam	UHGV-2200129_27	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-2200129_27	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-2200129_27	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_29	phrog_30034	199.8	0	N/A	unknown function
UniRef90	UHGV-2200129_29	UniRef90_A0A3D1XGA4	127.0	1.81e-33	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_29	665950.HMPREF1025_02518	142.0	1.90001e-40	N/A	N/A
PHROG	UHGV-2200129_30	phrog_2712	42.5	0.0000000000077	tail fiber protein	tail
eggNOG-mapper	UHGV-2200129_30	553973.CLOHYLEM_05669	59.3	0.0000000414	to Mitochondrial intermediate peptidase K01410	N/A
COG	UHGV-2200129_30	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-2200129_31	phrog_13141	416.2	0	N/A	unknown function
UniRef90	UHGV-2200129_31	UniRef90_A0A6L8RVX5	163.0	1.4013e-45	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_31	411460.RUMTOR_02097	343.0	0	N/A	N/A
structural_annotation	UHGV-2200129_31	PF20747,PF17900	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_32	phrog_538	216.4	0	minor tail protein	tail
UniRef90	UHGV-2200129_32	UniRef90_UPI001F3E20C1	304.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-2200129_32	742765.HMPREF9457_03374	318.0	0	N/A	N/A
Pfam	UHGV-2200129_32	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-2200129_32	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2200129_33	742723.HMPREF9477_00896	188.0	0	N/A	N/A
structural_annotation	UHGV-2200129_33	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_34	phrog_1533	615.8	0	tail length tape measure protein	tail
UniRef90	UHGV-2200129_34	UniRef90_A0A828SZM0	1604.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2200129_34	411468.CLOSCI_00278	859.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-2200129_34	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2200129_34	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2200129_34	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2200129_34	PF10145,TIGR01760	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2200129_35	PF16462	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_36	phrog_2175	101.7	6.9e-30	protein with Ig domain	other
eggNOG-mapper	UHGV-2200129_36	411468.CLOSCI_00281	267.0	0	N/A	N/A
structural_annotation	UHGV-2200129_36	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2200129_37	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_38	phrog_5	63.3	5.4e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-2200129_38	UniRef90_UPI001C3BB077	218.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2200129_38	411468.CLOSCI_00283	166.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2200129_38	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2200129_38	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-2200129_39	UniRef90_A0A828SZY0	191.0	0	Phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-2200129_39	411468.CLOSCI_00284	96.3	1.31e-24	N/A	N/A
Pfam	UHGV-2200129_39	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-2200129_39	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_40	phrog_132	55.8	7.5e-16	head-tail adaptor	connector
UniRef90	UHGV-2200129_40	UniRef90_UPI000C75BAD8	139.0	1.06e-40	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2200129_40	1123405.AUMM01000039_gene148	48.9	0.00000479	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-2200129_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-2200129_40	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_41	phrog_267	164.8	0	major head protein	head and packaging
UniRef90	UHGV-2200129_41	UniRef90_A0A7V8IA85	363.0	0	Phage coat protein gp6	N/A
eggNOG-mapper	UHGV-2200129_41	1321778.HMPREF1982_03550	309.0	0	P22 coat protein-protein 5 domain protein	N/A
Pfam	UHGV-2200129_41	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-2200129_41	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_42	phrog_194	130.4	1.4e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-2200129_42	UniRef90_UPI000C76E206	298.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2200129_42	1209989.TepiRe1_1150	120.0	1.17e-31	Phage minor structural protein GP20	N/A
Pfam	UHGV-2200129_42	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2200129_42	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2200129_45	phrog_4728	77.1	2.2e-22	head morphogenesis	head and packaging

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2200129	Yes	32,171	40	54	1