vOTU vOTU-123160

vOTU: vOTU-123160

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-123160
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-03404 → vGENUS-04901 → vOTU-123160
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1449988
Biosample ID	N/A
Genome length (bp)	26,749 bps
CheckV completeness	60.54% (Medium-quality)
CDS count	40
CDS density	94.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.54)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1449988_1	K22299	67.8	2.3e-19	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1449988_1	phrog_8	79.5	5.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1449988_1	UniRef90_D4S844	108.0	8.04e-28	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1449988_1	585503.HMPREF7545_1709	108.0	1.35e-28	Transcriptional	N/A
Pfam	UHGV-1449988_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1449988_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1449988_1	PF01381,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_2	K22300	61.4	1.8e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1449988_2	phrog_2439	47.6	0.00000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-1449988_2	UniRef90_A0A316PCA6	60.8	0.0000000000612	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1449988_2	1392491.JIAE01000001_gene1751	62.4	0.0000000000263	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1449988_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1449988_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1449988_5	phrog_30153	133.7	5.6e-40	N/A	unknown function
UniRef90	UHGV-1449988_5	UniRef90_E0NZL4	179.0	0	LysM domain protein	N/A
eggNOG-mapper	UHGV-1449988_5	864563.HMPREF9166_1281	179.0	0	LysM domain	N/A
Pfam	UHGV-1449988_5	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1449988_5	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1449988_5	MF_02014,NF010723	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_10	phrog_434	332.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_10	UniRef90_D4S849	634.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1449988_10	585503.HMPREF7545_1714	634.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-1449988_10	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1449988_10	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1449988_10	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1449988_10	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_11	K07455	291.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1449988_11	phrog_148	267.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_11	UniRef90_D4S850	574.0	0	Recombinase, phage RecT family	N/A
eggNOG-mapper	UHGV-1449988_11	585503.HMPREF7545_1715	574.0	0	Recombinase, phage RecT family	N/A
Pfam	UHGV-1449988_11	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1449988_11	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1449988_11	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1449988_11	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_12	phrog_398	197.7	0	N/A	unknown function
UniRef90	UHGV-1449988_12	UniRef90_J5HVT6	285.0	0	PF06147 family protein	N/A
eggNOG-mapper	UHGV-1449988_12	585503.HMPREF7545_1716	429.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1449988_12	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1449988_12	PF16784	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449988_14	UniRef90_A0A530X1Y6	70.9	0.000000000000309	N/A	N/A
eggNOG-mapper	UHGV-1449988_14	768710.DesyoDRAFT_1079	78.2	2.41e-16	Protein conserved in bacteria	N/A
Pfam	UHGV-1449988_14	PF18741	N/A	N/A	REase_MTES_1575	MTES_1575
COG	UHGV-1449988_14	COG2852	N/A	N/A	Very-short-patch-repair endonuclease	N/A
PHROG	UHGV-1449988_15	phrog_678	61.8	1.5e-17	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_15	UniRef90_A0A0X8KA38	103.0	1.44e-22	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449988_15	585503.HMPREF7545_1718	92.4	2.22e-19	N/A	N/A
COG	UHGV-1449988_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1449988_15	PF04492,MF_01911,TIGR01610,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_16	K02315	165.1	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1449988_16	phrog_50	148.9	3.50325e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_16	UniRef90_A0A1B3X738	369.0	0	ATP-binding protein IstB	N/A
eggNOG-mapper	UHGV-1449988_16	585503.HMPREF7545_1719	339.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1449988_16	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1449988_16	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1449988_16	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_19	phrog_190	135.4	3.09999e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_19	UniRef90_J4KCN7	267.0	0	PF06356 family protein	N/A
eggNOG-mapper	UHGV-1449988_19	936573.HMPREF1147_1709	267.0	0	N/A	N/A
Pfam	UHGV-1449988_19	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1449988_19	PF06356,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_20	phrog_98	66.3	4.2e-19	N/A	unknown function
UniRef90	UHGV-1449988_20	UniRef90_G5GMI7	102.0	1.92e-25	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1449988_20	679201.HMPREF9334_00468	102.0	3.23e-26	YopX protein	N/A
Pfam	UHGV-1449988_20	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1449988_20	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449988_21	UniRef90_D4S860	244.0	0	N/A	N/A
Pfam	UHGV-1449988_21	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-1449988_22	phrog_954	233.4	0	DNA methyltransferase	other
UniRef90	UHGV-1449988_22	UniRef90_E0NXL4	311.0	0	Methyltransf_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449988_22	864563.HMPREF9166_0581	311.0	0	methyltransferase	N/A
PADLOC	UHGV-1449988_22	MTase_II_00074	216.0	0	Type II methyltransferase	RM
Pfam	UHGV-1449988_22	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1449988_22	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1449988_22	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_23	K03111	132.8	3.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1449988_23	phrog_44	143.9	8.29569e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449988_23	UniRef90_A0A1B3X2R0	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1449988_23	864563.HMPREF9166_1268	185.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1449988_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1449988_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1449988_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1449988_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1449988_23	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449988_24	1200557.JHWV01000001_gene279	108.0	1.26e-27	N/A	N/A
structural_annotation	UHGV-1449988_24	TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449988_25	1009370.ALO_12391	79.0	5.04e-17	N/A	N/A
structural_annotation	UHGV-1449988_25	PF10263	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_26	K07474	73.7	5.1e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1449988_26	phrog_51	75.0	5.4e-23	terminase small subunit	head and packaging
UniRef90	UHGV-1449988_26	UniRef90_D4S865	238.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1449988_26	585503.HMPREF7545_1730	238.0	0	Terminase small subunit	N/A
Pfam	UHGV-1449988_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1449988_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1449988_26	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1449988_27	K06909	85.7	6.3e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1449988_27	phrog_2	168.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1449988_27	UniRef90_UPI001D00EC11	509.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1449988_27	585503.HMPREF7545_1731	880.0	0	Terminase-like family	N/A
Pfam	UHGV-1449988_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1449988_27	COG5323	N/A	N/A	Phage large terminase packaging protein	N/A
structural_annotation	UHGV-1449988_27	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_29	phrog_332	407.9	0	head-tail adaptor	connector
UniRef90	UHGV-1449988_29	UniRef90_A0A8B2QMC7	623.0	0	Head-to-tail connecting protein	N/A
eggNOG-mapper	UHGV-1449988_29	585503.HMPREF7545_1733	1060.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1449988_29	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1449988_29	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_31	phrog_458	94.3	1.8e-27	protease	other
UniRef90	UHGV-1449988_31	UniRef90_A0A6J5NV41	74.3	0.000000000000662	Putative protease	N/A
eggNOG-mapper	UHGV-1449988_31	585503.HMPREF7545_1735	323.0	0	N/A	N/A
PHROG	UHGV-1449988_32	phrog_212	119.1	0	major head protein	head and packaging
UniRef90	UHGV-1449988_32	UniRef90_A0A0U1KVA9	343.0	0	N/A	N/A
eggNOG-mapper	UHGV-1449988_32	585503.HMPREF7545_1736	631.0	0	N/A	N/A
Pfam	UHGV-1449988_32	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1449988_32	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449988_33	585503.HMPREF7545_1737	239.0	0	N/A	N/A
structural_annotation	UHGV-1449988_33	PF21190,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_35	phrog_394	179.5	0	tail protein	tail
UniRef90	UHGV-1449988_35	UniRef90_A0A8B2QU77	214.0	0	Tail tube protein	N/A
eggNOG-mapper	UHGV-1449988_35	585503.HMPREF7545_1739	411.0	0	N/A	N/A
structural_annotation	UHGV-1449988_35	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_36	phrog_376	732.0	0	tail protein	tail
UniRef90	UHGV-1449988_36	UniRef90_A0A0U1KV93	538.0	0	N/A	N/A
eggNOG-mapper	UHGV-1449988_36	585503.HMPREF7545_1740	1490.0	0	N/A	N/A
structural_annotation	UHGV-1449988_36	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_37	phrog_308	106.5	2.3e-31	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1449988_37	585503.HMPREF7545_1741	298.0	0	N/A	N/A
Pfam	UHGV-1449988_37	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-1449988_37	PF11039,MF_02210,NF011709,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1449988_38	phrog_418	42.2	0.0000000000064	internal virion protein	head and packaging
structural_annotation	UHGV-1449988_38	TIGR02971	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449988_39	UniRef90_A0A1B3X2T2	1199.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449988_39	1401067.HMPREF0872_06760	99.8	9.57e-19	N/A	N/A
structural_annotation	UHGV-1449988_39	PF01464,COG0741	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449988_40	585503.HMPREF7545_1744	1318.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1449988	Yes	26,749	52	61	1