vOTU vOTU-123209

vOTU: vOTU-123209

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-123209
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 → vSUBFAM-00274 → vGENUS-00786 → vOTU-123209
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter bartlettii
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0358756
Biosample ID	N/A
Genome length (bp)	24,710 bps
CheckV completeness	61.37% (Medium-quality)
CDS count	28
CDS density	93.61%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter → Intestinibacter bartlettii	Total connections	64	Host agreement	89.06
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae	Total connections	11	Host agreement	72.73

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0358756_2	phrog_98	77.5	1.7e-22	N/A	unknown function
UniRef90	UHGV-0358756_2	UniRef90_UPI001B1D1D0D	81.6	2.48e-17	YopX family protein	N/A
eggNOG-mapper	UHGV-0358756_2	1235800.C819_02639	60.5	0.000000000625	YopX protein	N/A
Pfam	UHGV-0358756_2	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0358756_2	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_4	phrog_36	83.1	3.9e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0358756_4	UniRef90_A0A1C5YXD8	231.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-0358756_4	1415774.U728_2924	65.5	0.0000000000237	sigma factor activity	N/A
NCBIFam	UHGV-0358756_4	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
COG	UHGV-0358756_4	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0358756_4	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_5	phrog_9079	72.2	6.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0358756_5	1151292.QEW_0709	70.9	0.00000000000000756	N/A	N/A
PHROG	UHGV-0358756_6	phrog_1889	189.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0358756_6	UniRef90_A0A446I889	294.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0358756_6	1158609.I586_00076	115.0	4.39e-28	Phage terminase small subunit	N/A
Pfam	UHGV-0358756_6	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0358756_6	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0358756_6	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358756_6	PF10668,PF02996,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0358756_7	K06909	147.1	1.49939e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0358756_7	phrog_10250	226.5	0	N/A	unknown function
UniRef90	UHGV-0358756_7	UniRef90_A0A1C5YXC2	907.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0358756_7	411490.ANACAC_00783	628.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0358756_7	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0358756_7	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0358756_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0358756_7	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_8	phrog_64	192.4	0	portal protein	head and packaging
UniRef90	UHGV-0358756_8	UniRef90_A0A1C5YX51	905.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0358756_8	1443122.Z958_p0036	170.0	1.54143e-44	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0358756_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0358756_8	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_9	phrog_1657	200.3	0	head morphogenesis	head and packaging
UniRef90	UHGV-0358756_9	UniRef90_A0A1C5YWY9	551.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
eggNOG-mapper	UHGV-0358756_9	1582149.A0A0A8WEF5_9CAUD	253.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0358756_9	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
PHROG	UHGV-0358756_11	phrog_774	63.8	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0358756_11	397290.C810_05225	74.7	1.88e-16	N/A	N/A
PHROG	UHGV-0358756_13	phrog_194	127.2	1.4e-37	head scaffolding protein	head and packaging
UniRef90	UHGV-0358756_13	UniRef90_A0A1C5YXG1	389.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0358756_13	1033740.CAEW01000026_gene530	106.0	4.42e-26	Phage minor structural protein GP20	N/A
Pfam	UHGV-0358756_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0358756_13	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_14	phrog_544	232.9	0	major head protein	head and packaging
UniRef90	UHGV-0358756_14	UniRef90_UPI001C0F52E5	426.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0358756_14	411471.SUBVAR_06940	246.0	0	N/A	N/A
NCBIFam	UHGV-0358756_14	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0358756_14	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_15	phrog_4020	79.7	2.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-0358756_15	1121342.AUCO01000012_gene1692	67.8	0.0000000000000772	N/A	N/A
PHROG	UHGV-0358756_16	phrog_8435	86.5	2.4e-25	N/A	unknown function
structural_annotation	UHGV-0358756_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_17	phrog_5	44.2	0.0000000000051	tail completion or Neck1 protein	connector
UniRef90	UHGV-0358756_17	UniRef90_A0A2H4J736	97.4	2.76e-23	Putative tail component protein	N/A
eggNOG-mapper	UHGV-0358756_17	559189.B6SBT4_9CAUD	97.8	4.77e-24	N/A	N/A
structural_annotation	UHGV-0358756_17	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_18	phrog_7585	85.4	6.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0358756_18	1443122.Z958_05865	63.9	0.0000000000281	N/A	N/A
structural_annotation	UHGV-0358756_18	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_19	phrog_6686	207.4	0	tail tube protein	tail
UniRef90	UHGV-0358756_19	UniRef90_E7DNB3	70.5	0.0000000000277	Structural protein	N/A
eggNOG-mapper	UHGV-0358756_19	871584.D9ZNE2_9CAUD	119.0	2.58e-31	N/A	N/A
structural_annotation	UHGV-0358756_19	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_20	phrog_6280	127.8	6e-38	N/A	unknown function
UniRef90	UHGV-0358756_20	UniRef90_UPI001AA892DF	94.0	8.12e-22	esterase	N/A
eggNOG-mapper	UHGV-0358756_20	748727.CLJU_c31240	79.3	1.01e-16	N/A	N/A
PHROG	UHGV-0358756_21	phrog_5493	147.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0358756_21	UniRef90_A0A1C5YW53	1085.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0358756_21	1121091.AUMP01000032_gene3109	85.5	0.0000000000000927	phage tail tape measure protein	N/A
COG	UHGV-0358756_21	COG3953	N/A	N/A	SLT domain protein	N/A
structural_annotation	UHGV-0358756_21	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_22	phrog_33	87.4	2.6e-25	distal tail protein Dit	tail
UniRef90	UHGV-0358756_22	UniRef90_UPI00110706FB	498.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0358756_22	1032362.F6K8S1_9CAUD	130.0	3.59e-34	Phage tail protein	N/A
structural_annotation	UHGV-0358756_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0358756_23	phrog_13289	480.0	0	tail protein	tail
UniRef90	UHGV-0358756_23	UniRef90_UPI00148533BC	2336.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0358756_23	1151292.QEW_4523	414.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0358756_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0358756_23	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0358756_23	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0358756_24	phrog_4184	40.3	0.000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0358756_24	203119.Cthe_2495	89.4	2.88e-16	gluconolactonase activity	N/A
COG	UHGV-0358756_24	COG3386	N/A	N/A	Sugar lactone lactonase YvrE	N/A
UniRef90	UHGV-0358756_25	UniRef90_A0A6L5XGX1	309.0	0	FAD-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-0358756_25	1158294.JOMI01000003_gene2017	181.0	0	geranylgeranyl reductase activity	N/A
Pfam	UHGV-0358756_25	PF12831	N/A	N/A	FAD dependent oxidoreductase	FAD_oxidored
COG	UHGV-0358756_25	COG0644	N/A	N/A	Dehydrogenase (flavoprotein)	N/A
PHROG	UHGV-0358756_26	phrog_1193	68.8	6.1e-20	hemolysin	other
UniRef90	UHGV-0358756_26	UniRef90_UPI0018AB0AA6	67.0	0.000000000000537	hemolysin XhlA family protein	N/A
Pfam	UHGV-0358756_26	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
PHROG	UHGV-0358756_27	phrog_1129	79.5	2.5e-23	holin	lysis
UniRef90	UHGV-0358756_27	UniRef90_A0A0B3VH17	114.0	2.5e-31	Holin	N/A
eggNOG-mapper	UHGV-0358756_27	702450.CUW_0551	100.0	6.53e-27	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0358756_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0358756_27	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0358756_28	K01447	72.5	7.3e-21	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0358756_28	phrog_3088	113.9	1.6e-33	amidase	lysis
UniRef90	UHGV-0358756_28	UniRef90_A0A1C5YVD6	342.0	0	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
eggNOG-mapper	UHGV-0358756_28	1121335.Clst_0412	75.9	0.000000000000123	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0358756_28	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0358756_28	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0358756_28	PF01510,PF18342,NF008758,NF033202,COG5632	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0358756	Yes	24,710	31	61	1