vOTU vOTU-123394

vOTU: vOTU-123394

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-123394
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00441 → vOTU-123394
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0864405
Biosample ID	N/A
Genome length (bp)	30,896 bps
CheckV completeness	53.87% (Medium-quality)
CDS count	51
CDS density	89.52%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	1901	Host agreement	87.64
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0864405_1	phrog_229	92.0	7.6e-27	MazG-like pyrophosphatase	other
UniRef90	UHGV-0864405_1	UniRef90_A0A8D9PGJ8	164.0	0	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0864405_1	428125.CLOLEP_01391	94.7	2.75e-24	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0864405_1	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0864405_1	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0864405_1	PF03819	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_2	phrog_236	93.8	3.3e-27	nucleotide kinase	other
UniRef90	UHGV-0864405_2	UniRef90_A0A8D9PGN7	229.0	0	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-0864405_2	411473.RUMCAL_00920	100.0	6.38e-26	N/A	N/A
Pfam	UHGV-0864405_2	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0864405_2	PF11753	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0864405_4	429009.Adeg_0703	79.0	0.0000000000000533	DnaD domain protein	N/A
COG	UHGV-0864405_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-0864405_6	UniRef90_A0A8D9PGW1	125.0	2.13e-36	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-0864405_6	PF05225,COG2886	N/A	N/A	N/A	N/A
UniRef90	UHGV-0864405_11	UniRef90_A0A8D9PG29	160.0	0	Acetyl-coA carboxylase zinc finger domain protein	N/A
UniRef90	UHGV-0864405_18	UniRef90_UPI0011072322	71.6	0.0000000000000863	N/A	N/A
eggNOG-mapper	UHGV-0864405_18	411473.RUMCAL_00360	70.1	0.0000000000000509	N/A	N/A
structural_annotation	UHGV-0864405_18	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_19	phrog_38	140.2	1.49995e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0864405_19	UniRef90_A0A8D9UIV2	1033.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0864405_19	397290.C810_01390	667.0	0	chromosome segregation	N/A
Pfam	UHGV-0864405_19	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-0864405_19	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0864405_19	PF17289,PF03237,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_20	phrog_36	62.6	7.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0864405_20	UniRef90_A0A352SH29	85.9	2.82e-19	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-0864405_20	97138.C820_00772	68.6	0.000000000000818	sigma factor activity	N/A
Pfam	UHGV-0864405_20	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0864405_20	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0864405_20	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0864405_21	UniRef90_A0A8D9UIR9	152.0	0	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0864405_22	phrog_64	169.3	0	portal protein	head and packaging
UniRef90	UHGV-0864405_22	UniRef90_R7BGE4	762.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0864405_22	1298920.KI911353_gene2663	471.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0864405_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0864405_22	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0864405_23	UniRef90_R6C0B6	114.0	7.99e-29	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0864405_24	phrog_909	49.3	0.000000000000076	major head protein	head and packaging
eggNOG-mapper	UHGV-0864405_24	1298920.KI911353_gene2661	125.0	1.14e-35	N/A	N/A
PHROG	UHGV-0864405_26	phrog_29	150.4	1.26117e-44	major head protein	head and packaging
UniRef90	UHGV-0864405_26	UniRef90_UPI001D02C54B	603.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0864405_26	1298920.KI911353_gene2660	349.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0864405_26	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0864405_26	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0864405_27	UniRef90_A0A416G2T8	52.4	0.000000376	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0864405_27	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_28	phrog_774	68.5	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0864405_28	397290.C810_05225	139.0	5.09933e-42	N/A	N/A
eggNOG-mapper	UHGV-0864405_29	397290.C810_01402	68.2	0.000000000000395	N/A	N/A
PHROG	UHGV-0864405_30	phrog_1863	49.8	0.000000000000022	N/A	unknown function
PHROG	UHGV-0864405_31	phrog_18218	140.1	5.79997e-42	N/A	unknown function
UniRef90	UHGV-0864405_31	UniRef90_A0A8D9PGR5	193.0	0	Holin	N/A
eggNOG-mapper	UHGV-0864405_31	411902.CLOBOL_03424	84.0	1.51e-19	N/A	N/A
structural_annotation	UHGV-0864405_31	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0864405_32	1298920.KI911353_gene2656	65.9	0.0000000000128	N/A	N/A
structural_annotation	UHGV-0864405_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0864405_33	1298920.KI911353_gene2654	186.0	0	N/A	N/A
AcrCatalog	UHGV-0864405_33	cluster_24841	89.0	2.82e-24	NA	N/A
structural_annotation	UHGV-0864405_34	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0864405_35	476272.RUMHYD_01968	155.0	0	N/A	N/A
structural_annotation	UHGV-0864405_35	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_36	phrog_36112	76.1	3.7e-22	N/A	unknown function
UniRef90	UHGV-0864405_36	UniRef90_A0A8D9PG71	277.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0864405_36	1298920.KI911353_gene2651	128.0	1.86e-35	N/A	N/A
structural_annotation	UHGV-0864405_36	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_38	phrog_28918	75.8	3.5e-22	N/A	unknown function
UniRef90	UHGV-0864405_38	UniRef90_A0A8D9PGP0	662.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0864405_38	1298920.KI911353_gene2649	168.0	1.95061e-42	tape measure	N/A
COG	UHGV-0864405_38	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0864405_38	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_39	phrog_1535	101.0	5.7e-30	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0864405_39	483218.BACPEC_01146	95.1	4.35e-17	domain protein	N/A
COG	UHGV-0864405_39	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0864405_40	phrog_1194	57.4	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0864405_40	1232453.BAIF02000058_gene1638	63.5	0.0000000000456	N/A	N/A
structural_annotation	UHGV-0864405_40	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_41	phrog_1401	56.2	5.6e-16	N/A	unknown function
structural_annotation	UHGV-0864405_41	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_42	phrog_6616	141.0	1.26117e-44	tail protein	tail
eggNOG-mapper	UHGV-0864405_42	1499683.CCFF01000014_gene3896	153.0	1.01e-34	Phage minor structural protein	N/A
COG	UHGV-0864405_42	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0864405_42	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0864405_43	K07273	153.4	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-0864405_43	phrog_291	141.8	5.89947e-42	endolysin	lysis
UniRef90	UHGV-0864405_43	UniRef90_A0A8D9UIP9	807.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0864405_43	411470.RUMGNA_00451	194.0	0	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-0864405_43	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0864405_43	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0864405_43	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0864405_44	PF03843,MF_01959,TIGR00752,COG3065	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0864405_45	PF13108	N/A	N/A	N/A	N/A
KOfam	UHGV-0864405_47	K22300	61.0	2.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0864405_47	phrog_8	77.7	2.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0864405_47	UniRef90_A0A8D9UIK2	233.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0864405_47	445974.CLORAM_02966	84.7	1.74e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0864405_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0864405_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0864405_47	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0864405_48	UniRef90_A0A8D9UIR6	132.0	5.86e-39	DNA-binding transcriptional regulator	N/A
eggNOG-mapper	UHGV-0864405_48	1121335.Clst_0370	93.2	2.16e-24	N/A	N/A
structural_annotation	UHGV-0864405_48	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0864405_51	phrog_463	219.8	0	anti-repressor	transcription regulation
UniRef90	UHGV-0864405_51	UniRef90_A0A8D9PGL6	399.0	0	P22_AR protein	N/A
eggNOG-mapper	UHGV-0864405_51	596329.HMPREF0631_1352	185.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-0864405_51	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0864405_51	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0864405_51	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0864405_51	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0864405	Yes	30,896	37	54	1