vOTU vOTU-123692

vOTU: vOTU-123692

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-123692
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → ERR7746345_bin.85
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00476 → vGENUS-04160 → vOTU-123692
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0176616
Biosample ID	SAMN09781684
Genome length (bp)	21,216 bps
CheckV completeness	57.49% (Medium-quality)
CDS count	30
CDS density	95.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735	Total connections	52	Host agreement	86.54
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → ERR7746345_bin.85	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0176616_1	K07319	140.4	1.79997e-41	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0176616_1	phrog_498	398.5	0	DNA methyltransferase	other
UniRef90	UHGV-0176616_1	UniRef90_A0A1H9YAJ4	319.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0176616_1	693746.OBV_19980	318.0	0	DNA methylase	N/A
PADLOC	UHGV-0176616_1	MTase_II_00015	248.7	0	Type II methyltransferase	RM
Pfam	UHGV-0176616_1	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0176616_1	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0176616_1	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0176616_1	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_2	phrog_83	47.5	0.00000000000029	terminase small subunit	head and packaging
UniRef90	UHGV-0176616_2	UniRef90_G4L1I0	88.6	4.14e-20	Putative terminase small subunit	N/A
eggNOG-mapper	UHGV-0176616_2	693746.OBV_19990	88.6	6.94e-21	Phage terminase, small subunit	N/A
Pfam	UHGV-0176616_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0176616_2	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0176616_3	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_4	phrog_9	224.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0176616_4	UniRef90_R5EM34	744.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0176616_4	913865.DOT_5636	534.0	0	Phage Terminase	N/A
Pfam	UHGV-0176616_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0176616_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0176616_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0176616_4	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_5	phrog_12	151.2	7.00649e-45	portal protein	head and packaging
UniRef90	UHGV-0176616_5	UniRef90_R5ENV9	452.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0176616_5	491915.Aflv_0662	391.0	0	Phage portal protein	N/A
Pfam	UHGV-0176616_5	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0176616_5	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0176616_5	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0176616_5	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0176616_6	K06904	154.6	1.4013e-45	N/A	N/A
PHROG	UHGV-0176616_6	phrog_80	176.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0176616_6	UniRef90_A0A373ZF38	238.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0176616_6	398512.JQKC01000009_gene450	231.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0176616_6	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0176616_6	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0176616_6	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0176616_6	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_7	phrog_10	77.0	1.9e-22	major head protein	head and packaging
UniRef90	UHGV-0176616_7	UniRef90_A0A1H4BNJ7	190.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0176616_7	742740.HMPREF9474_04304	216.0	0	Phage capsid family	N/A
Pfam	UHGV-0176616_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0176616_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0176616_7	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176616_8	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_9	phrog_1951	83.4	1.9e-24	head-tail adaptor	connector
UniRef90	UHGV-0176616_9	UniRef90_U2R2J1	98.6	1.17e-24	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0176616_9	1226322.HMPREF1545_00118	98.6	1.96e-25	N/A	N/A
structural_annotation	UHGV-0176616_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_10	phrog_5	42.2	0.000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-0176616_10	UniRef90_A0A4R3JAK0	94.4	3.45e-22	Bacteriophage HK97-gp10 putative tail-component	N/A
eggNOG-mapper	UHGV-0176616_10	1123298.KB904077_gene463	87.8	1.65e-20	N/A	N/A
Pfam	UHGV-0176616_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0176616_10	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176616_11	1123315.AUIP01000001_gene1429	77.4	5.8e-17	N/A	N/A
structural_annotation	UHGV-0176616_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_12	phrog_88	143.6	1.10002e-42	major tail protein	tail
UniRef90	UHGV-0176616_12	UniRef90_UPI001958259D	236.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0176616_12	411471.SUBVAR_05857	235.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0176616_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0176616_12	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_13	phrog_709	86.3	3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0176616_13	411471.SUBVAR_05858	115.0	6.37e-31	N/A	N/A
structural_annotation	UHGV-0176616_13	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_14	phrog_3033	59.0	6.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0176616_14	1235799.C818_01010	55.5	0.00000000115	N/A	N/A
PHROG	UHGV-0176616_15	phrog_3981	330.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0176616_15	UniRef90_UPI000C7A2D83	379.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0176616_15	1121334.KB911068_gene2299	293.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0176616_15	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0176616_15	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_16	phrog_33	88.9	9.9e-26	distal tail protein Dit	tail
UniRef90	UHGV-0176616_16	UniRef90_A0A1C5W6B6	221.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0176616_16	1160721.RBI_I01575	147.0	4.08002e-41	Phage tail protein	N/A
COG	UHGV-0176616_16	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0176616_16	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_17	phrog_1067	295.7	0	minor head protein	head and packaging
UniRef90	UHGV-0176616_17	UniRef90_A0A316NPB5	485.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176616_17	1123263.AUKY01000068_gene489	359.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0176616_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0176616_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0176616_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0176616_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176616_18	PF17642	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176616_19	2754.EH55_00535	65.9	0.00000000796	N/A	N/A
structural_annotation	UHGV-0176616_19	PF10651,PF04862,TIGR04362,COG5513	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176616_20	1408437.JNJN01000040_gene189	115.0	1.59e-31	N/A	N/A
PHROG	UHGV-0176616_21	phrog_30034	108.8	6.9e-32	N/A	unknown function
UniRef90	UHGV-0176616_21	UniRef90_R6RWR8	146.0	1.27e-41	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0176616_21	411460.RUMTOR_02099	126.0	2.86e-34	N/A	N/A
Pfam	UHGV-0176616_21	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0176616_21	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0176616_23	phrog_881	92.9	1.6e-27	holin	lysis
UniRef90	UHGV-0176616_23	UniRef90_A0A8D9PDR9	81.6	7.37e-19	Holin	N/A
eggNOG-mapper	UHGV-0176616_23	1229517.AMFD01000023_gene1299	75.1	4.22e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0176616_23	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0176616_23	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-0176616_24	K01448	83.6	2.7e-24	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0176616_24	phrog_435	96.3	4.3e-28	endolysin	lysis
UniRef90	UHGV-0176616_24	UniRef90_A0A351MWN4	163.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0176616_24	697281.Mahau_0053	125.0	1.67e-32	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0176616_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0176616_24	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0176616_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0176616_24	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176616_25	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176616_28	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176616_30	UniRef90_A0A843GWV6	112.0	3.25e-30	Rubrerythrin domain-containing protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0176616	Yes	21,216	61	57	1