vOTU vOTU-123892

vOTU: vOTU-123892

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-123892
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00236 → vGENUS-00162 → vOTU-123892
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp004557855
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0021690
Biosample ID	SAMEA4765641
Genome length (bp)	27,778 bps
CheckV completeness	84.53% (Medium-quality)
CDS count	44
CDS density	96.53%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp004557855	Total connections	27	Host agreement	74.07
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021690_1	phrog_361	68.4	1e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0021690_1	UniRef90_A0A1C6H6I9	169.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0021690_1	1329516.JPST01000017_gene431	50.1	0.00000597	Phage terminase, small subunit	N/A
Pfam	UHGV-0021690_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0021690_1	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0021690_2	phrog_9	293.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021690_2	UniRef90_A0A2V2GQ67	1189.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0021690_2	1226322.HMPREF1545_00113	882.0	0	Phage Terminase	N/A
Pfam	UHGV-0021690_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0021690_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0021690_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0021690_2	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_3	phrog_12	179.1	0	portal protein	head and packaging
UniRef90	UHGV-0021690_3	UniRef90_A0A2V2GQD5	778.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0021690_3	1226322.HMPREF1545_00114	502.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0021690_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0021690_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0021690_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0021690_3	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0021690_4	K06904	149.0	3.64338e-44	N/A	N/A
PHROG	UHGV-0021690_4	phrog_80	173.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0021690_4	UniRef90_A0A2V2GNJ3	382.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0021690_4	1226322.HMPREF1545_00115	245.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0021690_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0021690_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0021690_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0021690_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_5	phrog_10	218.5	0	major head protein	head and packaging
UniRef90	UHGV-0021690_5	UniRef90_A0A2V2GRA2	1016.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0021690_5	1226322.HMPREF1545_00116	587.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0021690_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0021690_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0021690_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0021690_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0021690_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_6	phrog_2550	86.2	1.7e-25	N/A	unknown function
UniRef90	UHGV-0021690_6	UniRef90_UPI001E35E63D	72.0	0.000000000000013	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0021690_6	1226322.HMPREF1545_00117	108.0	6.16e-30	N/A	N/A
structural_annotation	UHGV-0021690_6	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_7	phrog_1951	95.7	2.7e-28	head-tail adaptor	connector
UniRef90	UHGV-0021690_7	UniRef90_A0A2V2GSS5	209.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0021690_7	1226322.HMPREF1545_00118	104.0	1.16e-27	N/A	N/A
NCBIFam	UHGV-0021690_7	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0021690_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021690_8	UniRef90_UPI00073E355A	165.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0021690_8	665956.HMPREF1032_02261	95.9	9.87e-24	N/A	N/A
Pfam	UHGV-0021690_8	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0021690_8	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021690_9	UniRef90_U2SBX3	103.0	6.95e-27	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0021690_9	1226322.HMPREF1545_00120	103.0	1.17e-27	N/A	N/A
structural_annotation	UHGV-0021690_9	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_10	phrog_88	173.7	0	major tail protein	tail
UniRef90	UHGV-0021690_10	UniRef90_A0A2V2GLL2	358.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0021690_10	1226322.HMPREF1545_00121	195.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0021690_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0021690_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_11	phrog_709	96.5	1.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0021690_11	411471.SUBVAR_05858	126.0	5.91e-36	N/A	N/A
structural_annotation	UHGV-0021690_11	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_12	phrog_3033	42.3	0.000000000011	N/A	unknown function
PHROG	UHGV-0021690_13	phrog_13339	410.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0021690_13	UniRef90_A0A2V2GLB5	1043.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0021690_13	1033743.CAES01000020_gene3130	333.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0021690_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0021690_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0021690_13	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0021690_13	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_14	phrog_20385	84.5	1.7e-25	minor tail protein	tail
UniRef90	UHGV-0021690_14	UniRef90_UPI001C013719	162.0	2.8026e-45	phage baseplate protein	N/A
eggNOG-mapper	UHGV-0021690_14	411471.SUBVAR_05861	180.0	0	N/A	N/A
structural_annotation	UHGV-0021690_14	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_15	phrog_7064	151.8	0	tail protein	tail
eggNOG-mapper	UHGV-0021690_15	665956.HMPREF1032_00106	264.0	0	N/A	N/A
Pfam	UHGV-0021690_15	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0021690_15	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_16	phrog_5811	81.1	8.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-0021690_16	665956.HMPREF1032_00105	127.0	1.56e-32	N/A	N/A
structural_annotation	UHGV-0021690_16	PF20747,TIGR03353	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_17	phrog_15594	65.1	8.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0021690_17	1118055.CAGU01000013_gene763	54.7	0.000000032	N/A	N/A
structural_annotation	UHGV-0021690_17	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_18	phrog_31538	42.3	0.000000000014	N/A	unknown function
PHROG	UHGV-0021690_19	phrog_13589	166.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0021690_19	428125.CLOLEP_01434	193.0	0	N/A	N/A
KOfam	UHGV-0021690_21	K10454	53.2	2.5e-17	KLHL17; kelch-like protein 17 (actinfilin)	N/A
Pfam	UHGV-0021690_21	PF01344	N/A	N/A	Kelch motif	Kelch_1
Pfam	UHGV-0021690_21	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
structural_annotation	UHGV-0021690_21	PF07250,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
KOfam	UHGV-0021690_22	K20285	52.0	0.0000000000000022	RABEPK; Rab9 effector protein with kelch motifs	N/A
UniRef90	UHGV-0021690_22	UniRef90_A0A8D9UHD8	75.5	0.0000000000537	mRNA splicing protein	N/A
Pfam	UHGV-0021690_22	PF07646	N/A	N/A	Kelch motif	Kelch_2
Pfam	UHGV-0021690_22	PF13964	N/A	N/A	Kelch motif	Kelch_6
Pfam	UHGV-0021690_22	PF13418	N/A	N/A	Galactose oxidase, central domain	Kelch_4
structural_annotation	UHGV-0021690_22	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_24	phrog_27545	121.9	3.7e-36	N/A	unknown function
UniRef90	UHGV-0021690_24	UniRef90_A0A2V2GQB6	256.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021690_24	411471.SUBVAR_06976	138.0	4.51e-40	N/A	N/A
Pfam	UHGV-0021690_24	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0021690_25	phrog_37604	65.2	8.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0021690_25	457412.RSAG_01109	63.5	0.0000000000735	N/A	N/A
eggNOG-mapper	UHGV-0021690_26	1347392.CCEZ01000043_gene405	57.8	0.0000000018	N/A	N/A
KOfam	UHGV-0021690_27	K01448	63.1	3.8e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0021690_27	phrog_435	70.9	2.3e-20	endolysin	lysis
UniRef90	UHGV-0021690_27	UniRef90_A0A2V2GRI9	391.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0021690_27	1519439.JPJG01000014_gene134	55.1	0.00000264	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0021690_27	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0021690_27	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0021690_27	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
KOfam	UHGV-0021690_28	K14059	129.4	4.9e-38	int; integrase	N/A
PHROG	UHGV-0021690_28	phrog_1	126.1	3.3e-37	integrase	integration and excision
UniRef90	UHGV-0021690_28	UniRef90_UPI001E298856	528.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0021690_28	748224.HMPREF9436_03382	271.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0021690_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0021690_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0021690_28	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021690_29	1280664.AUIX01000005_gene2823	52.8	0.00000397	N/A	N/A
UniRef90	UHGV-0021690_30	UniRef90_UPI001E2EC555	201.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0021690_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021690_30	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0021690_30	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_31	phrog_8	54.2	0.0000000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021690_31	UniRef90_UPI001E54DE4F	103.0	2.33e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0021690_31	1378168.N510_01712	82.4	2e-17	N/A	N/A
Pfam	UHGV-0021690_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0021690_31	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021690_32	UniRef90_A0A8D9PDN2	83.6	8.26e-20	DNA-binding protein	N/A
structural_annotation	UHGV-0021690_32	PF13560,NF040507,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021690_33	UniRef90_UPI001E431871	187.0	0	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0021690_33	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0021690_34	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_37	phrog_4433	322.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0021690_37	33035.JPJF01000122_gene2458	119.0	1.41e-28	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0021690_37	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0021690_37	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_39	phrog_659	197.6	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021690_39	UniRef90_UPI001E5A6693	385.0	0	N/A	N/A
eggNOG-mapper	UHGV-0021690_39	1507.HMPREF0262_00431	231.0	0	N/A	N/A
Pfam	UHGV-0021690_39	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0021690_39	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_40	phrog_72	64.6	1.4e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021690_40	UniRef90_UPI001F3F3E5C	147.0	8.45964e-42	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0021690_40	445972.ANACOL_01825	130.0	4.94e-36	N/A	N/A
structural_annotation	UHGV-0021690_40	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_41	phrog_7566	51.4	0.000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0021690_41	693746.OBV_24070	68.2	0.000000000000322	N/A	N/A
PHROG	UHGV-0021690_42	phrog_757	231.4	0	DNA methyltransferase	other
UniRef90	UHGV-0021690_42	UniRef90_A0A0D5YF64	265.0	0	Gp12	N/A
eggNOG-mapper	UHGV-0021690_42	1291050.JAGE01000001_gene2906	313.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0021690_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0021690_42	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0021690_43	K03111	128.8	6.3e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021690_43	phrog_44	134.1	9.3e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021690_43	UniRef90_UPI001E2A5A6F	241.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021690_43	1499683.CCFF01000014_gene3925	124.0	1.27e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0021690_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021690_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021690_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0021690_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021690_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0021690_44	phrog_16304	90.6	1.9e-26	N/A	unknown function
UniRef90	UHGV-0021690_44	UniRef90_UPI001E560709	382.0	0	N/A	N/A
eggNOG-mapper	UHGV-0021690_44	290402.Cbei_3733	62.0	0.00000000667	DnaD domain protein	N/A
Pfam	UHGV-0021690_44	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0021690_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0021690_44	PF19808	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021690	Yes	27,778	50	85	1