vOTU vOTU-124081

vOTU: vOTU-124081

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-124081
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00309 → vGENUS-15533 → vOTU-124081
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1550304
Biosample ID	N/A
Genome length (bp)	30,084 bps
CheckV completeness	82.18% (Medium-quality)
CDS count	48
CDS density	89.58%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335	Total connections	59	Host agreement	74.58
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1224 → UMGS1224 sp900549775	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 82.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1550304_1	742738.HMPREF9460_01805	61.6	0.0000000000741	N/A	N/A
COG	UHGV-1550304_1	COG4859	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_4	phrog_4074	58.2	1.1e-16	N/A	unknown function
UniRef90	UHGV-1550304_4	UniRef90_V7HYF3	79.7	2.36e-17	Putative bacteriophage protein	N/A
eggNOG-mapper	UHGV-1550304_4	1232428.CAVO010000003_gene1016	76.6	1.27e-16	N/A	N/A
KOfam	UHGV-1550304_6	K19449	63.6	3.6e-18	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-1550304_6	phrog_8	55.1	0.0000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-1550304_6	UniRef90_R5YVI1	144.0	7.72115e-43	HTH-type transcriptional regulator SinR	N/A
eggNOG-mapper	UHGV-1550304_6	580340.Tlie_1437	50.4	0.00000201	Transcriptional regulator, XRE family	N/A
PADLOC	UHGV-1550304_6	retron_type_VI_hth_cluster2_1	49.8	0.000000000000088	N/A	Retron
Pfam	UHGV-1550304_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1550304_6	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-1550304_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1550304_6	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-1550304_7	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
structural_annotation	UHGV-1550304_7	PF02583,COG1937	N/A	N/A	N/A	N/A
KOfam	UHGV-1550304_8	K07341	137.4	1.8e-40	doc; death on curing protein	N/A
PHROG	UHGV-1550304_8	phrog_577	103.3	7.7e-31	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1550304_8	UniRef90_A0A3A9JVV6	135.0	2.01e-37	Type II toxin-antitoxin system death-on-curing family toxin	N/A
eggNOG-mapper	UHGV-1550304_8	986075.CathTA2_2755	98.2	3.74e-24	Fic/DOC family	N/A
Pfam	UHGV-1550304_8	PF02661	N/A	N/A	Fic/DOC family	Fic
NCBIFam	UHGV-1550304_8	TIGR01550.1	N/A	N/A	type II toxin-antitoxin system death-on-curing family toxin	N/A
COG	UHGV-1550304_8	COG3654	N/A	N/A	Prophage maintenance system killer protein	N/A
PHROG	UHGV-1550304_10	phrog_2329	63.2	3.4e-18	N/A	unknown function
KOfam	UHGV-1550304_11	K01447	123.2	2.5e-36	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1550304_11	phrog_1493	127.7	6.7e-38	endolysin	lysis
UniRef90	UHGV-1550304_11	UniRef90_R5YUL1	503.0	0	N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin)	N/A
eggNOG-mapper	UHGV-1550304_11	1120998.AUFC01000016_gene8	158.0	3.36312e-44	Ami_2	N/A
Pfam	UHGV-1550304_11	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1550304_11	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1550304_11	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1550304_11	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1550304_12	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_14	phrog_2310	48.1	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1550304_14	632245.CLP_2682	46.2	0.00000635	N/A	N/A
PHROG	UHGV-1550304_16	phrog_9116	137.1	8.90007e-41	tail protein	tail
UniRef90	UHGV-1550304_16	UniRef90_A0A3D1PJI0	217.0	0	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-1550304_16	694427.Palpr_1970	137.0	1.55e-31	tail collar domain protein	N/A
Pfam	UHGV-1550304_16	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-1550304_16	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1550304_17	phrog_6616	142.3	1.90577e-43	tail protein	tail
UniRef90	UHGV-1550304_17	UniRef90_R7F857	588.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1550304_17	1294142.CINTURNW_1706	104.0	5.67e-20	Phage minor structural protein	N/A
COG	UHGV-1550304_17	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1550304_18	phrog_1194	113.2	1.2e-33	N/A	unknown function
UniRef90	UHGV-1550304_18	UniRef90_R7F8R7	177.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-1550304_18	1122918.KB907248_gene4488	111.0	3.71e-30	N/A	N/A
Pfam	UHGV-1550304_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1550304_18	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_19	phrog_1535	471.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1550304_19	UniRef90_A0A174SV65	553.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-1550304_19	33035.JPJF01000093_gene2243	574.0	0	phage tail tape measure protein	N/A
COG	UHGV-1550304_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1550304_19	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-1550304_20	UniRef90_R7F982	63.9	0.00000000000137	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1550304_20	1540257.JQMW01000013_gene732	55.5	0.000000000513	Mu-like prophage protein Com	N/A
structural_annotation	UHGV-1550304_20	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_21	phrog_8355	106.6	5.5e-32	N/A	unknown function
UniRef90	UHGV-1550304_21	UniRef90_UPI001D0309B6	120.0	6.17e-33	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1550304_21	1415775.U729_2613	105.0	5.59e-28	N/A	N/A
Pfam	UHGV-1550304_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1550304_21	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_22	phrog_8300	55.7	8.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1550304_22	1151292.QEW_2425	60.5	0.000000000162	N/A	N/A
structural_annotation	UHGV-1550304_22	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_23	phrog_820	113.1	1.4e-33	major tail protein	tail
eggNOG-mapper	UHGV-1550304_23	33035.JPJF01000093_gene2246	205.0	0	N/A	N/A
structural_annotation	UHGV-1550304_23	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_24	phrog_2595	62.9	4.5e-18	head-tail connector protein	connector
eggNOG-mapper	UHGV-1550304_24	1151292.QEW_2427	62.8	0.000000000106	N/A	N/A
Pfam	UHGV-1550304_24	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1550304_24	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_25	phrog_556	47.2	0.00000000000037	minor head protein	head and packaging
eggNOG-mapper	UHGV-1550304_25	585501.HMPREF6123_0831	95.5	1.02e-23	N/A	N/A
PHROG	UHGV-1550304_26	phrog_8710	105.4	3.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1550304_26	1391647.AVSV01000003_gene1811	78.2	3.21e-17	N/A	N/A
structural_annotation	UHGV-1550304_26	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_27	phrog_541	63.7	2.8e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-1550304_27	552396.HMPREF0863_01637	60.1	0.000000000636	N/A	N/A
Pfam	UHGV-1550304_28	PF07716	N/A	N/A	Basic region leucine zipper	bZIP_2
PHROG	UHGV-1550304_29	phrog_422	276.3	0	major head protein	head and packaging
UniRef90	UHGV-1550304_29	UniRef90_A0A1Q6LIQ2	592.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1550304_29	663278.Ethha_1589	407.0	0	N/A	N/A
structural_annotation	UHGV-1550304_29	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1550304_31	UniRef90_UPI001B376D40	73.2	0.0000000000000154	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1550304_31	1499689.CCNN01000007_gene1692	65.1	0.0000000000049	TM2 domain	N/A
Pfam	UHGV-1550304_31	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-1550304_31	COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_33	phrog_581	217.6	0	minor head protein	head and packaging
UniRef90	UHGV-1550304_33	UniRef90_UPI001D086335	361.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1550304_33	742740.HMPREF9474_03503	281.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1550304_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1550304_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1550304_33	PF06152,PF03496,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_34	phrog_533	238.2	0	portal protein	head and packaging
UniRef90	UHGV-1550304_34	UniRef90_R7FBF4	791.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1550304_34	1294142.CINTURNW_1024	473.0	0	N/A	N/A
structural_annotation	UHGV-1550304_34	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_35	phrog_355	46.0	0.00000000000078	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1550304_35	UniRef90_UPI0013ED9517	83.2	3.12e-18	N/A	N/A
eggNOG-mapper	UHGV-1550304_35	97138.C820_00250	72.4	0.00000000000000284	N/A	N/A
Pfam	UHGV-1550304_35	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1550304_35	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-1550304_36	K06909	58.1	1.6e-16	xtmB; phage terminase large subunit	N/A
UniRef90	UHGV-1550304_36	UniRef90_A0A1Q6LEF5	907.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1550304_36	1282664.H354_06621	517.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1550304_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1550304_36	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_37	phrog_2538	91.6	6.4e-27	terminase small subunit	head and packaging
UniRef90	UHGV-1550304_37	UniRef90_A0A1Q6LE39	221.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1550304_37	1232430.CAVG010000114_gene1028	65.9	0.00000000000228	N/A	N/A
Pfam	UHGV-1550304_37	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-1550304_37	PF13022,COG3677	N/A	N/A	N/A	N/A
PHROG	UHGV-1550304_42	phrog_248	43.3	0.0000000000039	transcriptional activator	transcription regulation
UniRef90	UHGV-1550304_42	UniRef90_UPI0013E9353F	85.9	5.45e-19	nitroreductase	N/A
eggNOG-mapper	UHGV-1550304_42	573061.Clocel_2449	58.5	0.00000000368	N/A	N/A
Pfam	UHGV-1550304_42	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1550304_42	PF08281,MF_00674,TIGR01636,COG1191	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1550304_44	PF14001,MF_01194,TIGR03318,COG5475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1550304_45	PF20027	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1550304	Yes	30,084	29	82	1