vOTU vOTU-124663

vOTU: vOTU-124663

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-124663
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-19119 → vOTU-124663
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0144188
Biosample ID	SAMN05414924
Genome length (bp)	21,258 bps
CheckV completeness	55.95% (Medium-quality)
CDS count	38
CDS density	93.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	238	Host agreement	93.28
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	12	Host agreement	91.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0144188_1	phrog_706	64.2	2.3e-18	N/A	unknown function
UniRef90	UHGV-0144188_1	UniRef90_UPI00164D7633	127.0	7.8e-35	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0144188_1	693746.OBV_18170	114.0	2.21e-30	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0144188_1	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0144188_1	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_2	phrog_11299	99.4	3.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0144188_2	1449050.JNLE01000003_gene3883	63.9	0.0000000000795	N/A	N/A
structural_annotation	UHGV-0144188_2	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_3	phrog_3099	88.7	7.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0144188_3	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-0144188_3	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_4	phrog_3266	64.5	1.5e-18	tail completion	connector
eggNOG-mapper	UHGV-0144188_4	476272.RUMHYD_01781	120.0	1.36e-32	N/A	N/A
structural_annotation	UHGV-0144188_4	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_5	phrog_556	66.2	6.5e-20	minor head protein	head and packaging
UniRef90	UHGV-0144188_5	UniRef90_A0A1H7MNM8	119.0	2.01e-31	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0144188_5	476272.RUMHYD_01780	116.0	2.11e-31	N/A	N/A
Pfam	UHGV-0144188_5	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0144188_5	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_6	phrog_3366	49.9	0.00000000000006	N/A	unknown function
structural_annotation	UHGV-0144188_6	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_7	phrog_541	64.8	1.3e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-0144188_7	33035.JPJF01000106_gene3131	73.9	0.0000000000000149	N/A	N/A
PHROG	UHGV-0144188_8	phrog_267	54.8	0.0000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-0144188_8	1235799.C818_04223	158.0	8.40779e-44	N/A	N/A
structural_annotation	UHGV-0144188_8	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_9	phrog_194	42.7	0.00000000001	head scaffolding protein	head and packaging
UniRef90	UHGV-0144188_9	UniRef90_UPI001C0EBA51	127.0	3.38e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0144188_9	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-0144188_9	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0144188_9	PF06810	N/A	N/A	N/A	N/A
UniRef90	UHGV-0144188_10	UniRef90_UPI000C08D045	48.1	0.00000579	N/A	N/A
PHROG	UHGV-0144188_11	phrog_581	249.7	0	minor head protein	head and packaging
UniRef90	UHGV-0144188_11	UniRef90_A0A3D4T830	348.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0144188_11	476272.RUMHYD_01761	224.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0144188_11	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0144188_11	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0144188_11	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144188_11	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_12	phrog_533	210.6	0	portal protein	head and packaging
UniRef90	UHGV-0144188_12	UniRef90_A0A173TY48	347.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0144188_12	33035.JPJF01000106_gene3135	323.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0144188_12	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_13	phrog_1233	97.8	1.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0144188_13	936375.HMPREF1152_1074	92.0	8.73e-23	N/A	N/A
structural_annotation	UHGV-0144188_13	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-0144188_14	K06909	395.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0144188_14	phrog_5653	145.4	2.60642e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0144188_14	UniRef90_A0A416S378	636.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0144188_14	33035.JPJF01000106_gene3136	600.0	0	Terminase small subunit	N/A
Pfam	UHGV-0144188_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0144188_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0144188_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0144188_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0144188_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0144188_14	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144188_15	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_16	phrog_36	62.6	8e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0144188_16	428125.CLOLEP_01806	107.0	1.12e-27	N/A	N/A
Pfam	UHGV-0144188_16	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0144188_16	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_17	phrog_3136	117.0	6.1e-35	N/A	unknown function
UniRef90	UHGV-0144188_17	UniRef90_UPI001C26B029	114.0	5.49e-28	ASCH domain-containing protein	N/A
structural_annotation	UHGV-0144188_17	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0144188_18	665956.HMPREF1032_03087	102.0	6.91e-26	N/A	N/A
structural_annotation	UHGV-0144188_18	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_20	phrog_111	154.1	0	DNA methyltransferase	other
UniRef90	UHGV-0144188_20	UniRef90_A0A316S635	214.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0144188_20	1567011.A0A0A7RUD1_9VIRU	179.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0144188_20	oMTase_00015	183.1	0	orphan methyltransferase	RM
Pfam	UHGV-0144188_20	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0144188_20	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_23	phrog_9474	123.9	1.5e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0144188_23	UniRef90_A0A1I7FTR4	116.0	3.29e-27	DnaD and phage-associated domain-containing protein	N/A
eggNOG-mapper	UHGV-0144188_23	644966.Tmar_0029	111.0	2.7e-25	HNH endonuclease	N/A
COG	UHGV-0144188_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0144188_24	K03111	141.1	1.19993e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0144188_24	phrog_44	135.5	3.9e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0144188_24	UniRef90_A0A1W1YRF9	182.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0144188_24	1226322.HMPREF1545_04080	177.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0144188_24	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0144188_24	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0144188_24	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0144188_24	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0144188_24	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0144188_25	K07455	289.5	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0144188_25	phrog_148	282.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0144188_25	UniRef90_U2SBP2	371.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0144188_25	1226322.HMPREF1545_00015	371.0	0	RecT family	N/A
Pfam	UHGV-0144188_25	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0144188_25	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0144188_25	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0144188_25	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0144188_26	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
PHROG	UHGV-0144188_27	phrog_434	316.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0144188_27	UniRef90_A0A1Y4L975	297.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0144188_27	1121344.JHZO01000003_gene985	279.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0144188_27	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0144188_27	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0144188_27	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0144188_27	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0144188_31	1235835.C814_03153	66.6	0.0000000000001	N/A	N/A
structural_annotation	UHGV-0144188_31	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0144188_34	K22300	65.7	1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0144188_34	phrog_4	53.6	0.0000000000000055	transcriptional repressor	transcription regulation
UniRef90	UHGV-0144188_34	UniRef90_A0A174LY22	135.0	1.06e-38	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0144188_34	445972.ANACOL_03315	134.0	5.08e-39	N/A	N/A
Pfam	UHGV-0144188_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0144188_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0144188_34	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0144188_36	K07729	65.0	1.6e-18	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0144188_36	UniRef90_R5AVU4	90.9	7.64e-23	CI-like repressor	N/A
eggNOG-mapper	UHGV-0144188_36	1048834.TC41_2366	59.7	0.00000000117	COG1910 Periplasmic molybdate-binding protein domain	N/A
Pfam	UHGV-0144188_36	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0144188_36	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0144188_36	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0144188_38	K14059	139.0	6.20005e-41	int; integrase	N/A
PHROG	UHGV-0144188_38	phrog_1	159.4	0	integrase	integration and excision
UniRef90	UHGV-0144188_38	UniRef90_UPI000F051A1D	420.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0144188_38	693746.OBV_43340	402.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0144188_38	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0144188_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0144188_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0144188_38	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0144188	Yes	21,258	58	56	1