vOTU vOTU-124755

vOTU: vOTU-124755

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-124755
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00391 → vOTU-124755
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1409630
Biosample ID	SAMN02334126
Genome length (bp)	28,481 bps
CheckV completeness	66.74% (Medium-quality)
CDS count	37
CDS density	92.47%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	82	Host agreement	84.15
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	15	Host agreement	86.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1409630_2	phrog_21718	102.7	3.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-1409630_2	397290.C810_05210	73.6	0.0000000000000215	N/A	N/A
PHROG	UHGV-1409630_3	phrog_3754	95.0	7.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-1409630_3	476272.RUMHYD_01764	164.0	0	N/A	N/A
PHROG	UHGV-1409630_4	phrog_22978	910.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1409630_4	1410650.JHWL01000003_gene2814	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-1409630_5	1410650.JHWL01000003_gene2815	65.5	0.00000000457	N/A	N/A
UniRef90	UHGV-1409630_6	UniRef90_A0A8D9UGT1	134.0	2.19e-38	Sigma C capsid protein	N/A
PHROG	UHGV-1409630_7	phrog_511	225.8	0	internal virion protein	head and packaging
UniRef90	UHGV-1409630_7	UniRef90_A0A8D9UH72	935.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1409630_7	1226322.HMPREF1545_00785	310.0	0	N/A	N/A
structural_annotation	UHGV-1409630_7	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_8	phrog_12105	88.1	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1409630_8	1519439.JPJG01000060_gene1891	61.2	0.000000000204	N/A	N/A
PHROG	UHGV-1409630_9	phrog_435	54.8	0.0000000000000018	endolysin	lysis
UniRef90	UHGV-1409630_9	UniRef90_A0A8D9PDS4	364.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-1409630_9	1226322.HMPREF1545_01953	82.0	7.59e-16	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1409630_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1409630_9	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_10	phrog_1129	79.5	2.4e-23	holin	lysis
UniRef90	UHGV-1409630_10	UniRef90_A0A8D9PDD4	180.0	0	Holin	N/A
eggNOG-mapper	UHGV-1409630_10	1007096.BAGW01000035_gene1305	110.0	2.57e-30	N/A	N/A
Pfam	UHGV-1409630_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1409630_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_11	phrog_4105	103.7	9.8e-31	N/A	unknown function
UniRef90	UHGV-1409630_11	UniRef90_A0A8D9UHA9	206.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1409630_11	411460.RUMTOR_01326	140.0	3.32949e-42	N/A	N/A
PHROG	UHGV-1409630_13	phrog_2310	55.3	6.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1409630_13	1151292.QEW_0364	51.6	0.0000000238	N/A	N/A
Pfam	UHGV-1409630_15	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1409630_15	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_17	phrog_2295	56.5	4.6e-16	N/A	unknown function
Pfam	UHGV-1409630_17	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1409630_17	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_19	phrog_13589	166.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1409630_19	428125.CLOLEP_01434	200.0	0	N/A	N/A
PHROG	UHGV-1409630_20	phrog_31538	42.1	0.000000000017	N/A	unknown function
PHROG	UHGV-1409630_21	phrog_15594	59.4	5.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1409630_21	1118055.CAGU01000013_gene763	51.2	0.000000608	N/A	N/A
structural_annotation	UHGV-1409630_21	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_22	phrog_35419	55.2	0.0000000000000014	tail fiber protein	tail
eggNOG-mapper	UHGV-1409630_22	1127515.H9C0P1_9CAUD	64.7	0.0000000102	N/A	N/A
structural_annotation	UHGV-1409630_22	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_23	phrog_15239	85.9	2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1409630_23	1449126.JQKL01000003_gene1694	51.2	0.00000256	N/A	N/A
PHROG	UHGV-1409630_24	phrog_1357	259.9	0	major head protein	head and packaging
UniRef90	UHGV-1409630_24	UniRef90_A0A8D9UH64	795.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1409630_24	1449126.JQKL01000003_gene1695	453.0	0	N/A	N/A
Pfam	UHGV-1409630_24	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1409630_24	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1409630_24	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_25	phrog_13908	310.1	0	N/A	unknown function
UniRef90	UHGV-1409630_25	UniRef90_A0A844DRV7	120.0	5.21e-27	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1409630_25	1410650.JHWL01000003_gene2831	124.0	1.93e-30	N/A	N/A
UniRef90	UHGV-1409630_26	UniRef90_A0A8D9PDR6	192.0	0	YsxB-like protein	N/A
Pfam	UHGV-1409630_26	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-1409630_26	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_27	phrog_156	329.6	0	portal protein	head and packaging
UniRef90	UHGV-1409630_27	UniRef90_A0A8D9UH10	1231.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1409630_27	748224.HMPREF9436_01396	538.0	0	N/A	N/A
structural_annotation	UHGV-1409630_27	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1409630_28	K06909	117.7	1.1e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1409630_28	phrog_979	194.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1409630_28	UniRef90_A0A8D9PDR5	1018.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1409630_28	1321782.HMPREF1986_00343	615.0	0	N/A	N/A
Pfam	UHGV-1409630_28	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1409630_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1409630_28	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1409630_29	UniRef90_A0A8D9PDT2	247.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-1409630_29	1226322.HMPREF1545_00042	135.0	2.77e-39	N/A	N/A
structural_annotation	UHGV-1409630_29	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-1409630_30	K22299	47.4	0.00000000000043	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1409630_30	phrog_8	64.7	1.9e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1409630_30	UniRef90_A0A8D9PDC4	152.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-1409630_30	1226322.HMPREF1545_00039	79.0	1.69e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-1409630_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1409630_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1409630_30	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1409630_31	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_34	phrog_3136	129.7	9.6e-39	N/A	unknown function
UniRef90	UHGV-1409630_34	UniRef90_UPI001C00EDA4	123.0	9.15e-33	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1409630_34	693746.OBV_25380	54.3	0.00000193	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1409630_34	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1409630_34	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_35	phrog_8684	69.5	5.6e-22	N/A	unknown function
UniRef90	UHGV-1409630_35	UniRef90_A0A373CDP9	129.0	1.69e-35	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1409630_35	1226322.HMPREF1545_00036	67.0	0.0000000000039	YopX protein	N/A
Pfam	UHGV-1409630_35	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1409630_35	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1409630_35	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1409630_36	phrog_38832	58.2	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1409630_36	1232443.BAIA02000078_gene48	51.2	0.0000023	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1409630	Yes	28,481	59	67	1