vOTU vOTU-124803

vOTU: vOTU-124803

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-124803
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00161 → vOTU-124803
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0160187
Biosample ID	N/A
Genome length (bp)	33,065 bps
CheckV completeness	78.55% (Medium-quality)
CDS count	56
CDS density	94.72%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	67	Host agreement	94.03
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0160187_2	K06909	382.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0160187_2	phrog_3717	165.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0160187_2	UniRef90_A0A2U1BEH4	710.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0160187_2	33035.JPJF01000106_gene3136	460.0	0	Terminase small subunit	N/A
Pfam	UHGV-0160187_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0160187_2	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0160187_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0160187_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0160187_2	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_3	phrog_533	348.8	0	portal protein	head and packaging
UniRef90	UHGV-0160187_3	UniRef90_UPI0006C81717	671.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0160187_3	1226322.HMPREF1545_00044	593.0	0	N/A	N/A
Pfam	UHGV-0160187_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0160187_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_5	phrog_8680	230.1	0	N/A	unknown function
UniRef90	UHGV-0160187_5	UniRef90_UPI00189ACAD3	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-0160187_5	411470.RUMGNA_02208	232.0	0	N/A	N/A
Pfam	UHGV-0160187_5	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0160187_5	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_6	phrog_581	285.8	0	minor head protein	head and packaging
UniRef90	UHGV-0160187_6	UniRef90_UPI001D080D49	560.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0160187_6	1226322.HMPREF1545_00046	377.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0160187_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0160187_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_6	PF06152,PF15887,TIGR01641,COG4307	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_8	PF18152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0160187_9	1232443.BAIA02000078_gene31	86.3	5.77e-19	N/A	N/A
structural_annotation	UHGV-0160187_9	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_10	phrog_10	167.1	0	major head protein	head and packaging
UniRef90	UHGV-0160187_10	UniRef90_A0A2U1BEF2	504.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0160187_10	1226322.HMPREF1545_00050	474.0	0	Phage capsid family	N/A
Pfam	UHGV-0160187_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0160187_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0160187_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0160187_10	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_11	phrog_541	105.8	2.8e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0160187_11	642492.Clole_0822	63.5	0.0000000000627	N/A	N/A
PHROG	UHGV-0160187_12	phrog_3366	92.3	5.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0160187_12	1226322.HMPREF1545_00053	154.0	0	N/A	N/A
structural_annotation	UHGV-0160187_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_13	phrog_556	68.7	7.4e-20	minor head protein	head and packaging
UniRef90	UHGV-0160187_13	UniRef90_UPI00195E1497	171.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0160187_13	1226322.HMPREF1545_00054	128.0	3.29e-36	Minor capsid protein	N/A
Pfam	UHGV-0160187_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0160187_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_14	phrog_3266	52.8	0.0000000000000059	tail completion	connector
eggNOG-mapper	UHGV-0160187_14	1232443.BAIA02000078_gene24	140.0	1.07e-40	N/A	N/A
structural_annotation	UHGV-0160187_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_15	phrog_3099	99.1	5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0160187_15	1226322.HMPREF1545_00056	243.0	0	N/A	N/A
structural_annotation	UHGV-0160187_15	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_16	phrog_11299	90.7	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0160187_16	693746.OBV_18160	218.0	0	N/A	N/A
structural_annotation	UHGV-0160187_16	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_17	phrog_706	124.8	6.4e-37	N/A	unknown function
UniRef90	UHGV-0160187_17	UniRef90_UPI000682A80B	228.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0160187_17	693746.OBV_18170	220.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0160187_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0160187_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_19	phrog_1535	91.3	5.4e-28	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0160187_19	693746.OBV_18190	519.0	0	domain protein	N/A
COG	UHGV-0160187_19	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_19	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_20	phrog_1194	54.7	0.0000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0160187_20	1226322.HMPREF1545_00060	204.0	0	N/A	N/A
structural_annotation	UHGV-0160187_20	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_21	phrog_32744	545.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0160187_21	1120998.AUFC01000030_gene2247	237.0	0	N/A	N/A
structural_annotation	UHGV-0160187_21	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_22	phrog_3904	71.9	4.1e-21	tail fiber protein	tail
eggNOG-mapper	UHGV-0160187_22	1226322.HMPREF1545_00064	73.9	0.0000000000444	N/A	N/A
eggNOG-mapper	UHGV-0160187_23	1226322.HMPREF1545_00128	60.1	0.000000000348	N/A	N/A
eggNOG-mapper	UHGV-0160187_24	1297617.JPJD01000063_gene3069	45.4	0.00000362	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0160187_24	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0160187_24	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_26	phrog_199	92.0	6.4e-27	holin	lysis
UniRef90	UHGV-0160187_26	UniRef90_K1UL76	285.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-0160187_26	411467.BACCAP_00280	138.0	6.2e-40	Bacteriophage holin family	N/A
Pfam	UHGV-0160187_26	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0160187_26	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0160187_26	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0160187_26	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0160187_27	K08640	96.7	2.4e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0160187_27	phrog_18955	153.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0160187_27	UniRef90_UPI001C035E39	598.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0160187_27	1235797.C816_04171	331.0	0	Peptidase M15	N/A
Pfam	UHGV-0160187_27	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0160187_27	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0160187_27	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_27	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
UniRef90	UHGV-0160187_28	UniRef90_A0A658JVX5	73.6	0.00000000000000193	Sigma-70 family RNA polymerase sigma factor	N/A
Pfam	UHGV-0160187_28	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0160187_28	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0160187_28	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_30	phrog_3754	112.8	2.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-0160187_30	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
PHROG	UHGV-0160187_31	phrog_21718	106.6	2.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0160187_31	397290.C810_05210	80.1	6.94e-17	N/A	N/A
PHROG	UHGV-0160187_32	phrog_22984	88.1	7.6e-26	N/A	unknown function
PHROG	UHGV-0160187_33	phrog_16490	110.5	3.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0160187_33	1408437.JNJN01000043_gene803	145.0	3.13e-40	N/A	N/A
PHROG	UHGV-0160187_34	phrog_20016	173.7	0	N/A	unknown function
UniRef90	UHGV-0160187_34	UniRef90_A0A2Z4QB67	156.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0160187_34	1226322.HMPREF1545_00077	147.0	8.40779e-44	N/A	N/A
structural_annotation	UHGV-0160187_34	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_35	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0160187_36	1232443.BAIA02000078_gene6	55.5	0.000000021	N/A	N/A
KOfam	UHGV-0160187_37	K06400	276.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0160187_37	phrog_95	285.6	0	integrase	integration and excision
UniRef90	UHGV-0160187_37	UniRef90_A0A3A9I9T1	350.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0160187_37	357809.Cphy_2997	295.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0160187_37	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0160187_37	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0160187_37	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0160187_37	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0160187_38	UniRef90_A0A8D9UHA6	86.7	2.23e-18	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0160187_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0160187_38	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_39	phrog_301	42.5	0.000000000013	secreted protein	other
eggNOG-mapper	UHGV-0160187_39	1262449.CP6013_2082	171.0	0	N/A	N/A
structural_annotation	UHGV-0160187_39	PF11631,TIGR03066	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_42	phrog_585	81.4	8.8e-24	N/A	unknown function
UniRef90	UHGV-0160187_42	UniRef90_UPI00129D2984	77.8	0.00000000000000121	N/A	N/A
eggNOG-mapper	UHGV-0160187_42	1280692.AUJL01000009_gene2980	67.0	0.00000000000342	N/A	N/A
Pfam	UHGV-0160187_42	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0160187_42	PF10711,TIGR04176,COG1695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_43	NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0160187_44	UniRef90_A0A810QCI5	67.4	0.000000000000181	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0160187_44	1514668.JOOA01000002_gene1643	50.4	0.00000211	N/A	N/A
Pfam	UHGV-0160187_44	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0160187_44	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0160187_44	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0160187_47	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_49	phrog_4973	50.1	0.000000000000044	N/A	unknown function
UniRef90	UHGV-0160187_49	UniRef90_A0A3D3Y5F2	66.2	0.000000000000952	DNA-binding protein	N/A
Pfam	UHGV-0160187_49	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0160187_49	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-0160187_50	UniRef90_A0A845QLQ8	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0160187_50	1238184.CM001792_gene2550	98.2	1.68e-22	N/A	N/A
Pfam	UHGV-0160187_50	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0160187_50	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0160187_51	UniRef90_B0PAM4	165.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0160187_51	1238184.CM001792_gene2549	53.1	0.00000447	N/A	N/A
Pfam	UHGV-0160187_51	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0160187_51	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_52	phrog_72	66.3	3.3e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0160187_52	UniRef90_A0A8D9PDS2	167.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0160187_52	445972.ANACOL_01825	152.0	1.82169e-44	N/A	N/A
structural_annotation	UHGV-0160187_52	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0160187_53	phrog_7370	58.6	1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0160187_53	UniRef90_UPI001C122365	133.0	3.58e-38	HNH endonuclease	N/A
Pfam	UHGV-0160187_53	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-0160187_54	K03111	149.6	3.36312e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0160187_54	phrog_44	146.2	2.00386e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0160187_54	UniRef90_A0A8J7VJS5	291.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0160187_54	552398.HMPREF0866_02510	224.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0160187_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0160187_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0160187_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0160187_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0160187_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0160187	Yes	33,065	52	79	1