vOTU vOTU-125412

vOTU: vOTU-125412

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-125412
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-17821 → vOTU-125412
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1542365
Biosample ID	SAMEA2155134
Genome length (bp)	24,405 bps
CheckV completeness	54.39% (Medium-quality)
CDS count	28
CDS density	95.01%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	58	Host agreement	91.38
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	69	Host agreement	82.61

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1542365_1	phrog_7882	226.7	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1542365_1	UniRef90_A0A329TTA1	521.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-1542365_1	718252.FP2_28240	536.0	0	Replication initiator protein A	N/A
Pfam	UHGV-1542365_1	PF06970	N/A	N/A	Replication initiator protein A (RepA) N-terminus	RepA_N
Pfam	UHGV-1542365_1	PF19481	N/A	N/A	N/A	DUF6017
structural_annotation	UHGV-1542365_1	PF19481,PF06970,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-1542365_3	K07459	66.0	4e-19	ybjD; putative ATP-dependent endonuclease of the OLD family	N/A
UniRef90	UHGV-1542365_3	UniRef90_A0A2A7AVT1	835.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-1542365_3	742765.HMPREF9457_01004	268.0	0	AAA ATPase domain	N/A
PADLOC	UHGV-1542365_3	AAA_15	58.7	2.8e-21	N/A	N/A
Pfam	UHGV-1542365_3	PF13175	N/A	N/A	AAA ATPase domain	AAA_15
COG	UHGV-1542365_3	COG4938	N/A	N/A	Predicted ATPase	N/A
structural_annotation	UHGV-1542365_3	PF13175,MF_00365,NF038234,COG1106	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1542365_4	497965.Cyan7822_4925	53.5	0.000000584	N/A	N/A
UniRef90	UHGV-1542365_5	UniRef90_A0A3A9BIL1	450.0	0	Type II restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-1542365_5	1042156.CXIVA_25090	431.0	0	N/A	N/A
eggNOG-mapper	UHGV-1542365_6	887929.HMP0721_1458	89.4	1.01e-17	N/A	N/A
PHROG	UHGV-1542365_7	phrog_10091	112.4	2.8e-33	holin	lysis
UniRef90	UHGV-1542365_7	UniRef90_D7GNX3	167.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1542365_7	428127.EUBDOL_01206	128.0	9.36e-38	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1542365_7	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1542365_7	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1542365_7	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1542365_7	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1542365_8	K03749	66.1	4.9e-19	dedD; DedD protein	N/A
PHROG	UHGV-1542365_8	phrog_20388	388.6	0	endolysin	lysis
UniRef90	UHGV-1542365_8	UniRef90_A0A1C5N059	921.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1542365_8	665956.HMPREF1032_00684	404.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1542365_8	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1542365_8	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1542365_8	PF05036	N/A	N/A	SPOR domain	SPOR
Pfam	UHGV-1542365_8	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1542365_8	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1542365_8	PF08230,PF01832,PF10030,NF038016,TIGR02594,COG1705,COG4322	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_9	phrog_1863	55.6	5.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1542365_9	1232452.BAIB02000007_gene1606	59.3	0.000000000748	N/A	N/A
PHROG	UHGV-1542365_10	phrog_1382	63.7	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1542365_10	665950.HMPREF1025_01332	64.7	0.000000000000217	N/A	N/A
NCBIFam	UHGV-1542365_10	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-1542365_11	phrog_1382	48.8	0.000000000000069	N/A	unknown function
NCBIFam	UHGV-1542365_11	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1542365_11	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1542365_12	742740.HMPREF9474_02256	67.8	0.000000000000273	N/A	N/A
structural_annotation	UHGV-1542365_12	PF07238	N/A	N/A	N/A	N/A
KOfam	UHGV-1542365_13	K00986	97.8	1e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1542365_13	phrog_1423	165.7	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1542365_13	UniRef90_A0A1C5MZK8	810.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-1542365_13	742740.HMPREF9474_02253	357.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1542365_13	icity0040	50.5	4.7e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1542365_13	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1542365_13	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1542365_13	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1542365_14	97139.C824_00240	125.0	4.75e-34	N/A	N/A
structural_annotation	UHGV-1542365_14	PF05635,NF008912	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542365_15	UniRef90_A0A1C5MZC0	567.0	0	N/A	N/A
eggNOG-mapper	UHGV-1542365_15	1235802.C823_01049	291.0	0	N/A	N/A
Pfam	UHGV-1542365_15	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-1542365_16	phrog_25620	47.4	0.00000000000016	tail collar fiber protein	tail
eggNOG-mapper	UHGV-1542365_16	365659.smi_0469	55.1	0.00000314	N/A	N/A
PHROG	UHGV-1542365_17	phrog_18725	65.8	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1542365_17	585501.HMPREF6123_0822	102.0	4.88e-26	N/A	N/A
PHROG	UHGV-1542365_18	phrog_13879	287.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1542365_18	1235800.C819_00474	486.0	0	N/A	N/A
structural_annotation	UHGV-1542365_18	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_19	phrog_1194	89.7	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1542365_19	742740.HMPREF9474_03515	120.0	1.49e-33	N/A	N/A
Pfam	UHGV-1542365_19	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1542365_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_20	phrog_1535	163.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1542365_20	UniRef90_A0A1C6L0H4	1338.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1542365_20	1121866.AUGK01000003_gene1437	294.0	0	phage tail tape measure protein	N/A
COG	UHGV-1542365_20	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1542365_21	1121333.JMLH01000047_gene1011	91.3	1.56e-21	N/A	N/A
UniRef90	UHGV-1542365_22	UniRef90_A0A1C0ADY7	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-1542365_22	1211844.CBLM010000023_gene988	92.8	4.6e-23	N/A	N/A
Pfam	UHGV-1542365_22	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1542365_22	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_23	phrog_158	58.1	1.9e-16	major tail protein	tail
UniRef90	UHGV-1542365_23	UniRef90_D7GNW1	278.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1542365_23	1232453.BAIF02000058_gene1634	104.0	6.4e-27	N/A	N/A
Pfam	UHGV-1542365_23	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1542365_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_24	phrog_78	41.1	0.000000000023	tail terminator	connector
eggNOG-mapper	UHGV-1542365_24	1121333.JMLH01000047_gene1014	56.6	0.0000000313	N/A	N/A
structural_annotation	UHGV-1542365_24	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1542365_25	UniRef90_UPI001BBD4500	64.7	0.000000000696	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1542365_25	1298920.KI911353_gene2654	61.2	0.00000000282	N/A	N/A
eggNOG-mapper	UHGV-1542365_26	1121866.AUGK01000003_gene1432	85.9	1.3e-19	N/A	N/A
UniRef90	UHGV-1542365_27	UniRef90_D7GNV9	208.0	0	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-1542365_27	1298920.KI911353_gene2658	55.8	0.0000000117	N/A	N/A
Pfam	UHGV-1542365_27	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1542365_27	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1542365_28	phrog_544	58.9	8.6e-17	major head protein	head and packaging
eggNOG-mapper	UHGV-1542365_28	428127.EUBDOL_01555	110.0	1.45e-27	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1542365	Yes	24,405	45	54	1