vOTU vOTU-125420

vOTU: vOTU-125420

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-125420
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00337 → vGENUS-00858 → vOTU-125420
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0387872
Biosample ID	N/A
Genome length (bp)	23,406 bps
CheckV completeness	60.02% (Medium-quality)
CDS count	28
CDS density	94.51%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	28	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.02)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0387872_1	phrog_2343	130.9	2.4e-39	terminase small subunit	head and packaging
UniRef90	UHGV-0387872_1	UniRef90_A0A5C5TE72	86.7	9.97e-20	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0387872_1	999425.HMPREF9186_02030	199.0	0	N/A	N/A
structural_annotation	UHGV-0387872_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_2	phrog_9	280.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0387872_2	UniRef90_X8K5U6	985.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0387872_2	999425.HMPREF9186_02031	1096.0	0	Terminase	N/A
Pfam	UHGV-0387872_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0387872_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0387872_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0387872_2	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_3	phrog_903	71.6	4.8e-21	N/A	unknown function
PHROG	UHGV-0387872_4	phrog_12	149.6	1.82169e-44	portal protein	head and packaging
UniRef90	UHGV-0387872_4	UniRef90_A0A4D6B0L6	748.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0387872_4	999425.HMPREF9186_02033	749.0	0	portal protein	N/A
Pfam	UHGV-0387872_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0387872_4	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0387872_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0387872_4	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0387872_5	K01358	128.4	6.7e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0387872_5	phrog_94	240.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0387872_5	UniRef90_A0A428HZ00	480.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0387872_5	999425.HMPREF9186_02034	498.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0387872_5	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0387872_5	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0387872_5	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_6	phrog_10	128.9	5.1e-38	major head protein	head and packaging
UniRef90	UHGV-0387872_6	UniRef90_A0A4D6B0J4	707.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0387872_6	999425.HMPREF9186_02035	680.0	0	Phage capsid family	N/A
Pfam	UHGV-0387872_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0387872_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0387872_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0387872_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_7	phrog_749	102.4	2.1e-30	N/A	unknown function
UniRef90	UHGV-0387872_7	UniRef90_A0A8B1YLI6	154.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0387872_7	999425.HMPREF9186_02036	187.0	0	N/A	N/A
structural_annotation	UHGV-0387872_7	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_8	phrog_933	53.6	0.0000000000000032	N/A	unknown function
PHROG	UHGV-0387872_9	phrog_25	43.7	0.0000000000042	head closure Hc1	connector
UniRef90	UHGV-0387872_9	UniRef90_A0A8B1YLH5	228.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0387872_9	999425.HMPREF9186_02038	254.0	0	N/A	N/A
structural_annotation	UHGV-0387872_9	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_10	phrog_5	40.1	0.000000000081	tail completion or Neck1 protein	connector
UniRef90	UHGV-0387872_10	UniRef90_A0A139RIK3	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0387872_10	565653.EGBG_01973	86.7	5.54e-20	N/A	N/A
structural_annotation	UHGV-0387872_10	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_11	phrog_78	80.3	2.3e-23	tail terminator	connector
UniRef90	UHGV-0387872_11	UniRef90_A0A139RIS6	192.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0387872_11	999425.HMPREF9186_02040	248.0	0	N/A	N/A
structural_annotation	UHGV-0387872_11	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_12	phrog_88	108.8	4.8e-32	major tail protein	tail
UniRef90	UHGV-0387872_12	UniRef90_K8MEB4	389.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0387872_12	1035189.HMPREF9954_1930	209.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0387872_12	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0387872_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0387872_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0387872_13	UniRef90_A0A1F1DLF7	388.0	0	N/A	N/A
Pfam	UHGV-0387872_13	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0387872_13	PF11611,MF_00791,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_14	phrog_187	62.6	6.5e-18	head-tail adaptor	connector
UniRef90	UHGV-0387872_14	UniRef90_A0A139NGQ9	147.0	4.34403e-44	Putative phage protein	N/A
PHROG	UHGV-0387872_16	phrog_1293	1247.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0387872_16	UniRef90_A0A1F1C292	2076.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0387872_16	999425.HMPREF9186_02045	1574.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0387872_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0387872_16	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0387872_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0387872_16	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_17	phrog_33	80.2	4.4e-23	distal tail protein Dit	tail
UniRef90	UHGV-0387872_17	UniRef90_A0A8B1YSX1	428.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0387872_17	999425.HMPREF9186_02046	460.0	0	N/A	N/A
COG	UHGV-0387872_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0387872_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_18	phrog_2270	530.6	0	N/A	unknown function
UniRef90	UHGV-0387872_18	UniRef90_UPI001D075EB7	1748.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0387872_18	999425.HMPREF9186_02047	1306.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0387872_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0387872_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0387872_18	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387872_18	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_20	phrog_1554	235.2	0	N/A	unknown function
UniRef90	UHGV-0387872_20	UniRef90_A0A359YI08	294.0	0	N/A	N/A
eggNOG-mapper	UHGV-0387872_20	1005705.HMPREF9967_1055	213.0	0	N/A	N/A
structural_annotation	UHGV-0387872_20	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_21	phrog_1296	90.5	8.9e-27	holin	lysis
UniRef90	UHGV-0387872_21	UniRef90_A0A0M9FH77	100.0	1.24e-25	Phage membrane protein	N/A
PHROG	UHGV-0387872_22	phrog_10091	77.0	2.2e-22	holin	lysis
UniRef90	UHGV-0387872_22	UniRef90_A0A4D6B4F0	171.0	0	Holin	N/A
eggNOG-mapper	UHGV-0387872_22	999425.HMPREF9186_02051	165.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0387872_22	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0387872_22	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0387872_22	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387872_22	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-0387872_23	K07273	110.0	2.8e-32	acm; lysozyme	N/A
PHROG	UHGV-0387872_23	phrog_8577	499.7	0	endolysin	lysis
UniRef90	UHGV-0387872_23	UniRef90_A0A4D6A8M1	894.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0387872_23	372457.A7DYC5_9CAUD	300.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0387872_23	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0387872_23	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
structural_annotation	UHGV-0387872_23	PF01183,PF05257,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_24	phrog_6487	183.0	0	N/A	unknown function
UniRef90	UHGV-0387872_24	UniRef90_A0A0U0KNR2	129.0	2.39e-35	N/A	N/A
eggNOG-mapper	UHGV-0387872_24	999425.HMPREF9186_02053	264.0	0	N/A	N/A
structural_annotation	UHGV-0387872_24	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0387872_25	phrog_4757	51.5	0.0000000000000056	N/A	unknown function
PHROG	UHGV-0387872_26	phrog_21909	355.8	0	N/A	unknown function
UniRef90	UHGV-0387872_26	UniRef90_A0A4D6B362	165.0	0	Tail fiber protein	N/A
eggNOG-mapper	UHGV-0387872_26	999425.HMPREF9186_02055	324.0	0	N/A	N/A
PHROG	UHGV-0387872_27	phrog_1529	61.2	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0387872_27	1336234.JAGN01000025_gene751	47.8	0.00000157	N/A	N/A
structural_annotation	UHGV-0387872_27	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0387872_28	K14059	119.2	5.6e-35	int; integrase	N/A
PHROG	UHGV-0387872_28	phrog_1	104.6	1.4e-30	integrase	integration and excision
UniRef90	UHGV-0387872_28	UniRef90_A0A428EBJ4	201.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0387872_28	999425.HMPREF9186_01996	303.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0387872_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0387872_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0387872_28	PF00589,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0387872	Yes	23,406	40	60	1