vOTU vOTU-126499

vOTU: vOTU-126499

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-126499
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 → vSUBFAM-00190 → vGENUS-00528 → vOTU-126499
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter faecis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1465973
Biosample ID	N/A
Genome length (bp)	35,568 bps
CheckV completeness	70.44% (Medium-quality)
CDS count	53
CDS density	91.55%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter faecis	Total connections	144	Host agreement	84.03
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1465973_4	phrog_2412	65.7	7.3e-19	N/A	unknown function
UniRef90	UHGV-1465973_4	UniRef90_A0A6Z7A1E4	54.7	0.00000286	Stress-induced protein	N/A
structural_annotation	UHGV-1465973_5	PF16857,NF010188,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_6	phrog_2245	77.2	2.2e-22	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1465973_6	1415774.U728_1686	52.0	0.000000341	N/A	N/A
KOfam	UHGV-1465973_7	K03497	44.3	0.0000000000032	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1465973_7	phrog_620	156.5	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465973_7	UniRef90_A0A4D6A7C4	155.0	1.82169e-44	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1465973_7	1476902.A0A067ZI74_9CAUD	123.0	2.04e-32	N-methyltransferase activity	N/A
PADLOC	UHGV-1465973_7	MTase_II_00015	89.3	6.1e-26	Type II methyltransferase	RM
Pfam	UHGV-1465973_7	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-1465973_7	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_8	phrog_842	51.1	0.000000000000022	beta-glucosyl-HMC-alpha-glucosyltransferase	other
eggNOG-mapper	UHGV-1465973_8	1236514.BAKL01000015_gene1638	226.0	0	N/A	N/A
Pfam	UHGV-1465973_8	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-1465973_8	PF20691,MF_00057,NF038299,COG1216	N/A	N/A	N/A	N/A
KOfam	UHGV-1465973_14	K06909	298.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1465973_14	phrog_2	116.2	4.4e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1465973_14	UniRef90_A0A349YI29	497.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1465973_14	1443122.Z958_p0035	436.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1465973_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1465973_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1465973_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1465973_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1465973_14	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_15	phrog_959	85.3	2.2e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465973_15	UniRef90_UPI001AAAF7A6	175.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1465973_15	1229751.R9QM99_9CAUD	62.8	0.00000000317	HNH endonuclease	N/A
PADLOC	UHGV-1465973_15	HEase_00016	60.5	7e-17	homing endonuclease	RM
Pfam	UHGV-1465973_15	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1465973_15	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-1465973_15	PF13392,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_17	phrog_19695	45.8	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1465973_17	478749.BRYFOR_08558	58.2	0.00000000133	N/A	N/A
structural_annotation	UHGV-1465973_17	PF19714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1465973_18	411462.DORLON_00771	128.0	5.28e-31	N/A	N/A
PHROG	UHGV-1465973_20	phrog_1009	41.3	0.000000000019	N/A	unknown function
PHROG	UHGV-1465973_21	phrog_443	58.3	1.9e-16	holin	lysis
UniRef90	UHGV-1465973_21	UniRef90_UPI000E5CA950	100.0	3.03e-26	holin	N/A
eggNOG-mapper	UHGV-1465973_21	1235802.C823_05612	84.0	1.86e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1465973_21	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1465973_21	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1465973_22	K21471	46.3	0.00000000000078	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-1465973_22	phrog_3393	80.8	2.2e-23	endolysin	lysis
UniRef90	UHGV-1465973_22	UniRef90_A0A3E4LXG7	462.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1465973_22	665950.HMPREF1025_02511	179.0	0	Ami_2	N/A
COG	UHGV-1465973_22	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1465973_22	PF05382,NF033743,COG5492,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_23	phrog_64	84.7	6.9e-25	portal protein	head and packaging
UniRef90	UHGV-1465973_23	UniRef90_A0A843JBG3	352.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1465973_23	1211817.CCAT010000049_gene2492	102.0	3.5e-20	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1465973_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1465973_23	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_25	phrog_1657	186.4	0	head morphogenesis	head and packaging
UniRef90	UHGV-1465973_25	UniRef90_A0A1G9U003	147.0	4.25e-38	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-1465973_25	748727.CLJU_c31360	132.0	4.29e-32	Portal protein	N/A
COG	UHGV-1465973_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
PHROG	UHGV-1465973_27	phrog_1315	43.1	0.0000000000058	N/A	unknown function
PHROG	UHGV-1465973_28	phrog_2303	43.2	0.0000000000028	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1465973_28	1231057.AMGD01000018_gene3620	55.5	0.0000013	N/A	N/A
structural_annotation	UHGV-1465973_28	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_29	phrog_909	80.0	2e-23	major head protein	head and packaging
eggNOG-mapper	UHGV-1465973_29	1158612.I580_01911	72.4	0.0000000000000151	N/A	N/A
structural_annotation	UHGV-1465973_29	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_30	phrog_29	259.6	0	major head protein	head and packaging
UniRef90	UHGV-1465973_30	UniRef90_UPI00082C04A5	416.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1465973_30	1158612.I580_01912	312.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1465973_30	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1465973_30	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465973_31	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_32	phrog_4020	68.1	9.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-1465973_32	445335.CBN_3083	70.5	0.00000000000000723	N/A	N/A
PHROG	UHGV-1465973_33	phrog_8435	58.1	1.2e-16	N/A	unknown function
structural_annotation	UHGV-1465973_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465973_34	UniRef90_A0A0C1UI84	77.8	3.17e-16	Bacteriophage HK97-gp10, tail-component family protein	N/A
eggNOG-mapper	UHGV-1465973_34	1443122.Z958_05860	90.9	4.3e-22	N/A	N/A
Pfam	UHGV-1465973_34	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1465973_34	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_35	phrog_7585	69.1	7.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1465973_35	1443122.Z958_05865	65.5	0.0000000000076	N/A	N/A
structural_annotation	UHGV-1465973_35	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_36	phrog_6686	132.6	2.3e-39	tail tube protein	tail
UniRef90	UHGV-1465973_36	UniRef90_A0A1C6KI12	171.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1465973_36	748727.CLJU_c31250	87.4	7.99e-18	N/A	N/A
structural_annotation	UHGV-1465973_36	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_37	phrog_6280	130.3	8.9e-39	N/A	unknown function
UniRef90	UHGV-1465973_37	UniRef90_UPI0005425395	114.0	1.11e-29	esterase	N/A
eggNOG-mapper	UHGV-1465973_37	445335.CBN_3078	112.0	5.18e-30	N/A	N/A
PHROG	UHGV-1465973_38	phrog_1533	379.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1465973_38	UniRef90_A0A3D1WP41	313.0	0	Phage tail tape measure protein (Fragment)	N/A
eggNOG-mapper	UHGV-1465973_38	411490.ANACAC_00728	285.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1465973_38	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1465973_38	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1465973_38	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1465973_38	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_39	phrog_33	60.8	2.9e-17	distal tail protein Dit	tail
UniRef90	UHGV-1465973_39	UniRef90_A0A6L3VAU7	76.6	0.00000000000221	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1465973_39	1211814.CAPG01000074_gene3444	90.1	5.61e-18	Phage tail protein	N/A
COG	UHGV-1465973_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1465973_39	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_40	phrog_538	145.8	2.60642e-43	minor tail protein	tail
UniRef90	UHGV-1465973_40	UniRef90_A0A1I7FBJ0	116.0	4.77e-25	Virus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-1465973_40	1497679.EP56_02980	97.1	6.78e-19	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1465973_40	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1465973_40	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_41	phrog_1220	216.1	0	head protein	head and packaging
UniRef90	UHGV-1465973_41	UniRef90_UPI0018A8D397	107.0	9.41e-24	phage baseplate protein	N/A
eggNOG-mapper	UHGV-1465973_41	1121423.JONT01000035_gene908	125.0	6.42e-32	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1465973_41	PF20747	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465973_42	UniRef90_R6M754	85.5	0.00000000000000337	Leucine-rich repeat (LRR) protein	N/A
eggNOG-mapper	UHGV-1465973_42	1410626.JHXB01000004_gene213	84.3	0.00000000000000502	N/A	N/A
Pfam	UHGV-1465973_42	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-1465973_42	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
COG	UHGV-1465973_42	COG1579	N/A	N/A	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	N/A
structural_annotation	UHGV-1465973_42	PF09479,PF00703,NF033188	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_45	phrog_21303	44.3	0.0000000000029	N/A	unknown function
structural_annotation	UHGV-1465973_47	PF06003,MF_01077,NF037951,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1465973_49	K02316	134.9	5.6e-40	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1465973_49	phrog_47	143.0	2.40042e-42	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465973_49	UniRef90_A0A843GN62	285.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-1465973_49	649638.Trad_0624	77.0	0.00000000000105	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-1465973_49	drt-UG29	46.6	1.3e-25	DRT	DRT
Pfam	UHGV-1465973_49	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1465973_49	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1465973_49	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1465973_49	PF01807,PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1465973_51	phrog_14578	45.9	0.0000000000011	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1465973_51	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-1465973_53	K02337	541.7	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1465973_53	phrog_405	504.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465973_53	UniRef90_A0A843GPT9	612.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1465973_53	1158338.JNLJ01000005_gene1515	322.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-1465973_53	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1465973_53	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
COG	UHGV-1465973_53	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1465973_53	PF07733,PF02811,MF_01902,NF005298,COG0587	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1465973	Yes	35,568	33	70	1