vOTU vOTU-126535

vOTU: vOTU-126535

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-126535
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → ERR7738192_bin.129
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01425 → vOTU-126535
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0012601
Biosample ID	SAMEA4765803
Genome length (bp)	21,025 bps
CheckV completeness	60.05% (Medium-quality)
CDS count	28
CDS density	96.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	46	Host agreement	95.65
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → ERR7738192_bin.129	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0012601_1	UniRef90_A0A6N3FXW7	139.0	3.67995e-41	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0012601_1	742738.HMPREF9460_04059	73.9	0.00000000000000187	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0012601_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0012601_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0012601_1	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0012601_3	K01448	61.1	1.7e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0012601_3	phrog_435	94.5	1.1e-27	endolysin	lysis
UniRef90	UHGV-0012601_3	UniRef90_A0A810PZ73	498.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0012601_3	697281.Mahau_0598	110.0	3.17e-26	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0012601_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0012601_3	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0012601_3	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0012601_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0012601_3	PF01520,PF08230,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_4	phrog_881	86.1	2.1e-25	holin	lysis
UniRef90	UHGV-0012601_4	UniRef90_UPI00189D3A4F	81.6	5.37e-19	phage holin	N/A
eggNOG-mapper	UHGV-0012601_4	742740.HMPREF9474_02251	81.6	1e-19	Putative phage holin Dp-1	N/A
Pfam	UHGV-0012601_4	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0012601_4	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_5	phrog_1863	70.3	1.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0012601_5	718252.FP2_04900	116.0	4.96e-33	N/A	N/A
structural_annotation	UHGV-0012601_6	NF033746,COG3764	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_7	phrog_240	41.9	0.000000000015	head protein	head and packaging
Pfam	UHGV-0012601_9	PF17963	N/A	N/A	Bacterial Ig domain	Big_9
UniRef90	UHGV-0012601_11	UniRef90_A0A3A6E2U3	110.0	7.27e-26	N/A	N/A
PHROG	UHGV-0012601_12	phrog_1067	333.2	0	minor head protein	head and packaging
UniRef90	UHGV-0012601_12	UniRef90_A0A1C6H6B4	498.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0012601_12	1123263.AUKY01000068_gene489	367.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0012601_12	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0012601_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0012601_12	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0012601_12	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_13	phrog_33	73.9	3.7e-21	distal tail protein Dit	tail
UniRef90	UHGV-0012601_13	UniRef90_A0A2X2UUQ3	161.0	2.8026e-45	Phage putative tail component	N/A
eggNOG-mapper	UHGV-0012601_13	536233.CLO_0897	87.4	4.21e-18	tail component	N/A
COG	UHGV-0012601_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0012601_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_14	phrog_58	137.1	9.99995e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0012601_14	742742.HMPREF9452_00386	113.0	2.65e-24	Phage tail tape measure protein TP901	N/A
COG	UHGV-0012601_14	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0012601_15	phrog_6900	227.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0012601_15	UniRef90_UPI00098581D4	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0012601_15	573061.Clocel_3967	207.0	0	tape measure	N/A
COG	UHGV-0012601_15	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0012601_15	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_18	phrog_88	90.9	1.5e-26	major tail protein	tail
UniRef90	UHGV-0012601_18	UniRef90_UPI0018771F27	124.0	2.55e-32	phage tail protein	N/A
eggNOG-mapper	UHGV-0012601_18	33035.JPJF01000039_gene278	71.2	0.00000000000152	N/A	N/A
NCBIFam	UHGV-0012601_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0012601_18	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_19	phrog_5	48.6	0.00000000000017	tail completion or Neck1 protein	connector
UniRef90	UHGV-0012601_19	UniRef90_A0A1C6FG30	142.0	3.94999e-40	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0012601_19	908340.HMPREF9406_2573	139.0	6.36e-40	N/A	N/A
structural_annotation	UHGV-0012601_19	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0012601_20	999413.HMPREF1094_02005	86.3	2.51e-20	N/A	N/A
structural_annotation	UHGV-0012601_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_21	phrog_19734	111.8	3.6e-33	N/A	unknown function
UniRef90	UHGV-0012601_21	UniRef90_A0A6I7GNS7	126.0	1.68e-34	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0012601_21	349161.Dred_2602	81.3	9.52e-18	N/A	N/A
PHROG	UHGV-0012601_22	phrog_749	62.2	8.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0012601_22	86416.Clopa_0342	62.0	0.0000000000374	N/A	N/A
PHROG	UHGV-0012601_23	phrog_10	145.2	6.60012e-43	major head protein	head and packaging
UniRef90	UHGV-0012601_23	UniRef90_G9YSC0	675.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0012601_23	1235792.C808_00086	393.0	0	Phage capsid family	N/A
Pfam	UHGV-0012601_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0012601_23	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0012601_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0012601_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0012601_23	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0012601_24	K01358	141.0	1.10002e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0012601_24	phrog_94	259.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0012601_24	UniRef90_A0A1Y4BT12	338.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0012601_24	349161.Dred_2605	316.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0012601_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0012601_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0012601_24	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_25	phrog_12	123.3	1.1e-36	portal protein	head and packaging
UniRef90	UHGV-0012601_25	UniRef90_UPI0018755FA4	504.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0012601_25	349161.Dred_2606	305.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0012601_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0012601_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0012601_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0012601_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_26	phrog_9	240.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0012601_26	UniRef90_A0A6I7GGF0	919.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0012601_26	1235792.C808_00083	610.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0012601_26	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0012601_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0012601_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0012601_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0012601_27	phrog_5110	58.1	8.6e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0012601_27	UniRef90_UPI00195E8788	117.0	2.43e-30	P27 family phage terminase small subunit	N/A
structural_annotation	UHGV-0012601_27	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0012601	Yes	21,025	59	60	1