vOTU vOTU-126669

vOTU: vOTU-126669

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-126669
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-14912 → vOTU-126669
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0109324
Biosample ID	SAMEA3708872
Genome length (bp)	24,708 bps
CheckV completeness	58.98% (Medium-quality)
CDS count	41
CDS density	93.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	170	Host agreement	75.29
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → UBA1685 → UBA1685 sp002320595	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0109324_1	phrog_21962	63.2	4e-18	tail protein	tail
eggNOG-mapper	UHGV-0109324_1	1321784.HMPREF1987_01086	55.8	0.00000469	translation initiation factor activity	N/A
Pfam	UHGV-0109324_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0109324_1	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
Pfam	UHGV-0109324_3	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
NCBIFam	UHGV-0109324_3	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
COG	UHGV-0109324_3	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0109324_3	PF21605,NF041825,COG3198	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_4	UniRef90_UPI00195E70AD	149.0	1.04e-36	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0109324_4	1235797.C816_04179	207.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0109324_4	PF14594	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_5	phrog_6616	49.7	0.000000000000026	tail protein	tail
UniRef90	UHGV-0109324_5	UniRef90_A0A2Z4QA17	262.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0109324_5	1235797.C816_04180	302.0	0	N/A	N/A
structural_annotation	UHGV-0109324_5	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_6	phrog_1194	79.6	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0109324_6	1232443.BAIA02000078_gene17	125.0	8.27e-36	N/A	N/A
structural_annotation	UHGV-0109324_6	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_7	phrog_1535	99.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0109324_7	UniRef90_A0A810PX76	177.0	1.28919e-43	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0109324_7	1235797.C816_04182	332.0	0	SLT domain	N/A
COG	UHGV-0109324_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109324_7	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_8	phrog_806	78.1	1.1e-22	N/A	unknown function
UniRef90	UHGV-0109324_8	UniRef90_UPI00137B5163	208.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109324_8	397290.C810_05150	140.0	2.69e-39	N/A	N/A
Pfam	UHGV-0109324_8	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0109324_8	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_9	phrog_706	122.4	3.5e-36	N/A	unknown function
UniRef90	UHGV-0109324_9	UniRef90_UPI000682A80B	250.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0109324_9	693746.OBV_18170	239.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0109324_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0109324_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_10	phrog_11299	92.6	4.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0109324_10	693746.OBV_18160	104.0	9.86e-27	N/A	N/A
structural_annotation	UHGV-0109324_10	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_11	phrog_3099	92.1	7.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0109324_11	1232443.BAIA02000078_gene23	232.0	0	N/A	N/A
structural_annotation	UHGV-0109324_11	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_12	phrog_3266	46.0	0.00000000000084	tail completion	connector
eggNOG-mapper	UHGV-0109324_12	1232443.BAIA02000078_gene24	150.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0109324_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_13	phrog_556	66.1	5.1e-19	minor head protein	head and packaging
UniRef90	UHGV-0109324_13	UniRef90_A0A2U1BEM0	186.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0109324_13	1226322.HMPREF1545_00054	153.0	0	Minor capsid protein	N/A
Pfam	UHGV-0109324_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0109324_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_14	phrog_3366	89.1	5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0109324_14	1226322.HMPREF1545_00053	154.0	0	N/A	N/A
structural_annotation	UHGV-0109324_14	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_15	phrog_541	106.0	2.5e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0109324_15	1449050.JNLE01000003_gene3888	54.3	0.000000181	N/A	N/A
PHROG	UHGV-0109324_16	phrog_544	188.4	0	major head protein	head and packaging
UniRef90	UHGV-0109324_16	UniRef90_A0A810PZM2	501.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0109324_16	1347392.CCEZ01000005_gene1236	289.0	0	N/A	N/A
structural_annotation	UHGV-0109324_16	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_17	UniRef90_A0A6B9SU02	64.7	0.00000000223	Fibronectin autolysin	N/A
structural_annotation	UHGV-0109324_17	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_18	phrog_581	278.7	0	minor head protein	head and packaging
UniRef90	UHGV-0109324_18	UniRef90_UPI001D080D49	562.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0109324_18	1226322.HMPREF1545_00046	350.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0109324_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0109324_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109324_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_20	phrog_8680	230.0	0	N/A	unknown function
UniRef90	UHGV-0109324_20	UniRef90_A0A3R6D7I3	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109324_20	411470.RUMGNA_02208	239.0	0	N/A	N/A
Pfam	UHGV-0109324_20	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0109324_20	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_22	phrog_533	377.8	0	portal protein	head and packaging
UniRef90	UHGV-0109324_22	UniRef90_A0A1C5N775	563.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0109324_22	1226322.HMPREF1545_00044	533.0	0	N/A	N/A
Pfam	UHGV-0109324_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0109324_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0109324_23	K06909	117.5	1.5e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0109324_23	phrog_2	118.2	1.3e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0109324_23	UniRef90_A0A3D3Y0N9	421.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0109324_23	1226322.HMPREF1545_00043	392.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0109324_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0109324_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0109324_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0109324_23	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_24	UniRef90_UPI0009523D83	162.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0109324_24	1226322.HMPREF1545_00042	161.0	0	N/A	N/A
structural_annotation	UHGV-0109324_24	PF13542	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_25	UniRef90_A0A285PYI3	62.8	0.000000000112	Homeodomain-like domain	N/A
eggNOG-mapper	UHGV-0109324_25	742738.HMPREF9460_02503	125.0	2.6e-36	N/A	N/A
structural_annotation	UHGV-0109324_25	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109324_27	445972.ANACOL_00168	49.7	0.000000443	N/A	N/A
PHROG	UHGV-0109324_28	phrog_1384	121.7	5.9e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0109324_28	665956.HMPREF1032_03086	271.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0109324_28	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_31	UniRef90_A0A8D9PDT5	131.0	2.1e-37	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0109324_32	phrog_38832	58.7	2.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0109324_32	665956.HMPREF1032_00143	67.4	0.00000000000984	N/A	N/A
structural_annotation	UHGV-0109324_32	PF18300,MF_01549,NF008636,COG4568	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109324_34	UniRef90_UPI0012AD39DD	56.2	0.00000393	leucine-rich repeat protein	N/A
UniRef90	UHGV-0109324_35	UniRef90_A0A098GES5	90.5	1.06e-21	Putative phage associated protein	N/A
structural_annotation	UHGV-0109324_35	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_36	phrog_27610	45.4	0.00000000000094	N/A	unknown function
PHROG	UHGV-0109324_37	phrog_111	155.1	0	DNA methyltransferase	other
UniRef90	UHGV-0109324_37	UniRef90_UPI000F065B6D	210.0	0	adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0109324_37	1450694.BTS2_0497	183.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0109324_37	oMTase_00015	191.1	0	orphan methyltransferase	RM
Pfam	UHGV-0109324_37	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0109324_37	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
Pfam	UHGV-0109324_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0109324_38	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0109324_39	K23779	57.7	9.8e-31	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0109324_39	phrog_8	78.6	1e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0109324_39	UniRef90_UPI00115BCC30	73.9	0.0000000000000811	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0109324_39	760568.Desku_2016	71.2	0.000000000000658	PFAM Helix-turn-helix	N/A
PADLOC	UHGV-0109324_39	retron_type_VI_hth_cluster2_1	41.1	2.6e-23	N/A	Retron
Pfam	UHGV-0109324_39	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0109324_39	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0109324_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0109324_39	PF01381,PF13744,NF041951,COG3655,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0109324_41	phrog_190	121.1	8.4e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0109324_41	UniRef90_UPI001583F66B	108.0	1.2e-27	N/A	N/A
eggNOG-mapper	UHGV-0109324_41	1226322.HMPREF1545_00295	131.0	8.52e-37	N/A	N/A
Pfam	UHGV-0109324_41	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0109324_41	PF06356	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0109324	Yes	24,708	53	59	1