vOTU vOTU-127425

vOTU: vOTU-127425

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-127425
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00533 → vGENUS-02034 → vOTU-127425
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2110213
Biosample ID	N/A
Genome length (bp)	33,400 bps
CheckV completeness	68.06% (Medium-quality)
CDS count	57
CDS density	91.90%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	33	Host agreement	78.79
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900548615	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2110213_2	K22300	69.6	6.2e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2110213_2	phrog_8	69.7	6.2e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-2110213_2	UniRef90_A0A3D4D7M3	102.0	6.69e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2110213_2	1540257.JQMW01000013_gene710	86.3	2.68e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2110213_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2110213_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2110213_2	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-2110213_3	UniRef90_A0A6M1WKA8	61.2	0.00000000007	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-2110213_3	1211817.CCAT010000007_gene1062	58.5	0.000000000161	N/A	N/A
structural_annotation	UHGV-2110213_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_4	phrog_14088	40.7	0.000000000027	N/A	unknown function
UniRef90	UHGV-2110213_4	UniRef90_A0A412MEV1	53.5	0.0000000339	Carboxypeptidase	N/A
eggNOG-mapper	UHGV-2110213_4	1256908.HMPREF0373_00648	54.7	0.00000000199	N/A	N/A
PHROG	UHGV-2110213_5	phrog_1305	141.7	3.50044e-42	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2110213_5	UniRef90_UPI00109BC3B9	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-2110213_5	588581.Cpap_0887	154.0	4.2039e-44	N/A	N/A
Pfam	UHGV-2110213_5	PF13643	N/A	N/A	N/A	DUF4145
structural_annotation	UHGV-2110213_5	COG2250	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2110213_6	693746.OBV_21850	53.1	0.000000016	N/A	N/A
structural_annotation	UHGV-2110213_7	PF15591,MF_01549,NF007981	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_11	phrog_36399	88.2	9.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-2110213_11	1007096.BAGW01000031_gene116	85.5	5.84e-20	N/A	N/A
PHROG	UHGV-2110213_12	phrog_8470	259.9	0	N/A	unknown function
UniRef90	UHGV-2110213_12	UniRef90_UPI0019580896	411.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2110213_12	1226322.HMPREF1545_00100	388.0	0	PcfJ-like protein	N/A
Pfam	UHGV-2110213_12	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2110213_12	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_13	phrog_15609	198.0	0	N/A	unknown function
UniRef90	UHGV-2110213_13	UniRef90_UPI001C102D5E	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-2110213_13	693746.OBV_24000	158.0	2.49011e-42	N/A	N/A
Pfam	UHGV-2110213_13	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-2110213_13	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-2110213_13	PF11300,NF038070	N/A	N/A	N/A	N/A
UniRef90	UHGV-2110213_15	UniRef90_A0A8D9PDK1	134.0	8.53e-39	Anti-repressor	N/A
PHROG	UHGV-2110213_17	phrog_2118	104.8	1e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2110213_17	UniRef90_A0A417HX51	198.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2110213_17	742740.HMPREF9474_03129	123.0	1.02e-34	HNH endonuclease	N/A
Pfam	UHGV-2110213_17	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2110213_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-2110213_17	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_18	phrog_599	44.7	0.0000000000029	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2110213_18	UniRef90_A0A417HWB0	105.0	7.67e-29	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-2110213_18	56780.SYN_03368	46.2	0.00000402	translation initiation factor activity	N/A
Pfam	UHGV-2110213_18	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-2110213_18	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
COG	UHGV-2110213_18	COG1601	N/A	N/A	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	N/A
structural_annotation	UHGV-2110213_18	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_21	phrog_18750	40.4	0.000000000041	N/A	unknown function
COG	UHGV-2110213_21	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-2110213_21	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
COG	UHGV-2110213_23	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
PHROG	UHGV-2110213_25	phrog_2657	162.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-2110213_25	UniRef90_A0A845R9C9	264.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2110213_25	33035.JPJF01000167_gene3604	250.0	0	N/A	N/A
Pfam	UHGV-2110213_25	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-2110213_25	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2110213_25	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-2110213_25	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-2110213_28	K07319	123.6	1.9e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-2110213_28	phrog_498	436.3	0	DNA methyltransferase	other
UniRef90	UHGV-2110213_28	UniRef90_R5AIZ8	442.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2110213_28	1423758.BN55_01455	426.0	0	DNA methylase	N/A
PADLOC	UHGV-2110213_28	MTase_II_00015	236.6	0	Type II methyltransferase	RM
Pfam	UHGV-2110213_28	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-2110213_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2110213_28	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2110213_28	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-2110213_30	K06909	65.2	1.1e-18	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2110213_30	phrog_2	101.6	1.3e-29	terminase large subunit	head and packaging
UniRef90	UHGV-2110213_30	UniRef90_A0A1I3QR69	419.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-2110213_30	999413.HMPREF1094_00221	318.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2110213_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2110213_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2110213_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2110213_30	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_31	phrog_533	309.9	0	portal protein	head and packaging
UniRef90	UHGV-2110213_31	UniRef90_UPI00189D71DB	555.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-2110213_31	1232443.BAIA02000078_gene36	536.0	0	N/A	N/A
structural_annotation	UHGV-2110213_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_32	phrog_581	300.1	0	minor head protein	head and packaging
UniRef90	UHGV-2110213_32	UniRef90_UPI001D080D49	603.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2110213_32	1226322.HMPREF1545_00046	443.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2110213_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2110213_32	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_34	phrog_3675	90.1	1.5e-26	N/A	unknown function
UniRef90	UHGV-2110213_34	UniRef90_UPI001C02868E	105.0	2.18e-27	YjcQ family protein	N/A
eggNOG-mapper	UHGV-2110213_34	1235799.C818_04221	116.0	1.9e-32	YjcQ protein	N/A
Pfam	UHGV-2110213_34	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-2110213_34	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
UniRef90	UHGV-2110213_36	UniRef90_UPI001D07C368	73.2	5.71e-16	ribbon-helix-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2110213_36	1378168.N510_02331	61.2	0.00000000000512	Ribbon-helix-helix protein, copG family	N/A
structural_annotation	UHGV-2110213_36	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
KOfam	UHGV-2110213_38	K07741	45.7	0.0000000000017	antB; anti-repressor protein	N/A
PHROG	UHGV-2110213_38	phrog_63	155.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-2110213_38	UniRef90_A0A2Z4QBA4	333.0	0	Regulatory protein	N/A
eggNOG-mapper	UHGV-2110213_38	1158607.UAU_05143	226.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-2110213_38	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-2110213_38	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-2110213_38	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2110213_38	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-2110213_38	PF09669,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_39	phrog_194	86.5	3.9e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-2110213_39	UniRef90_UPI00189CE417	171.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2110213_39	1232443.BAIA02000078_gene31	158.0	0	N/A	N/A
Pfam	UHGV-2110213_39	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2110213_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_40	phrog_909	52.5	0.000000000000008	major head protein	head and packaging
UniRef90	UHGV-2110213_40	UniRef90_K1TUL5	72.8	0.000000000000249	N/A	N/A
eggNOG-mapper	UHGV-2110213_40	1536772.R70723_06665	59.7	0.00000000309	N/A	N/A
Pfam	UHGV-2110213_40	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-2110213_40	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_41	phrog_29	176.5	0	major head protein	head and packaging
UniRef90	UHGV-2110213_41	UniRef90_UPI0004AE1FFD	430.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-2110213_41	1232443.BAIA02000078_gene29	430.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-2110213_41	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-2110213_41	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_42	phrog_541	94.6	8.2e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-2110213_42	411461.DORFOR_00743	51.2	0.00000308	N/A	N/A
PHROG	UHGV-2110213_43	phrog_3366	88.5	7.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-2110213_43	1226322.HMPREF1545_00053	148.0	5.1848e-44	N/A	N/A
Pfam	UHGV-2110213_43	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2110213_43	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_44	phrog_556	61.9	4.9e-18	minor head protein	head and packaging
UniRef90	UHGV-2110213_44	UniRef90_A0A2U1BEM0	182.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2110213_44	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-2110213_44	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2110213_44	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_45	phrog_3266	51.4	0.000000000000016	tail completion	connector
UniRef90	UHGV-2110213_45	UniRef90_A0A2Z4QA01	109.0	2.97e-28	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2110213_45	1232443.BAIA02000078_gene24	194.0	0	N/A	N/A
structural_annotation	UHGV-2110213_45	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_46	phrog_3099	92.6	4.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-2110213_46	693746.OBV_18150	229.0	0	N/A	N/A
structural_annotation	UHGV-2110213_46	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_47	phrog_11299	66.1	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-2110213_47	693746.OBV_18160	72.8	0.0000000000000186	N/A	N/A
structural_annotation	UHGV-2110213_47	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_48	phrog_706	128.9	3.3e-38	N/A	unknown function
UniRef90	UHGV-2110213_48	UniRef90_UPI00164D7633	208.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2110213_48	693746.OBV_18170	206.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2110213_48	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2110213_48	PF06854	N/A	N/A	N/A	N/A
UniRef90	UHGV-2110213_49	UniRef90_A0A2N2CRH6	114.0	3.7e-27	N/A	N/A
eggNOG-mapper	UHGV-2110213_49	720554.Clocl_3520	90.5	5.06e-19	cell wall binding repeat	N/A
COG	UHGV-2110213_49	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-2110213_49	PF17118,MF_00612,NF002486,COG3012	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_50	phrog_1535	130.7	0	tail length tape measure protein	tail
UniRef90	UHGV-2110213_50	UniRef90_A0A810PX76	397.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2110213_50	1235797.C816_04182	243.0	0	SLT domain	N/A
COG	UHGV-2110213_50	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2110213_50	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_51	phrog_1194	54.7	0.0000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-2110213_51	1232443.BAIA02000078_gene17	67.4	0.00000000000098	N/A	N/A
structural_annotation	UHGV-2110213_51	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_52	phrog_6616	45.1	0.00000000000067	tail protein	tail
UniRef90	UHGV-2110213_52	UniRef90_A0A2Z4QA17	94.0	8.69e-20	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-2110213_52	1232443.BAIA02000078_gene16	79.7	0.00000000000000332	N/A	N/A
structural_annotation	UHGV-2110213_52	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-2110213_53	UniRef90_A0A2Z4QA20	84.0	8.27e-16	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-2110213_53	1235797.C816_04179	86.3	3.74e-16	Chaperone of endosialidase	N/A
structural_annotation	UHGV-2110213_53	COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2110213_55	phrog_3904	50.4	0.00000000000002	tail fiber protein	tail
eggNOG-mapper	UHGV-2110213_55	693979.Bache_2190	77.4	0.00000000000622	N/A	N/A
Pfam	UHGV-2110213_56	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-2110213_56	PF21722	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2110213	Yes	33,400	54	68	1