vOTU vOTU-127577

vOTU: vOTU-127577

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-127577
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-00350 → vOTU-127577
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1432287
Biosample ID	N/A
Genome length (bp)	31,050 bps
CheckV completeness	88.58% (Medium-quality)
CDS count	42
CDS density	91.92%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	52	Host agreement	94.23
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1432287_1	phrog_9534	284.7	0	head protein	head and packaging
UniRef90	UHGV-1432287_1	UniRef90_R6SMG3	65.9	0.00000000364	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1432287_1	748224.HMPREF9436_03323	306.0	0	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-1432287_2	phrog_538	198.2	0	minor tail protein	tail
UniRef90	UHGV-1432287_2	UniRef90_UPI0011064D4D	108.0	4.55e-23	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1432287_2	748224.HMPREF9436_03324	620.0	0	N/A	N/A
Pfam	UHGV-1432287_2	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1432287_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_3	phrog_33	43.7	0.0000000000052	distal tail protein Dit	tail
UniRef90	UHGV-1432287_3	UniRef90_UPI00130E98E0	297.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1432287_3	748224.HMPREF9436_03325	501.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1432287_3	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_4	phrog_28775	915.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1432287_4	UniRef90_A0A2J4JRN1	1005.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1432287_4	748224.HMPREF9436_03326	349.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1432287_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1432287_4	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1432287_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_5	phrog_706	120.0	1.7e-35	N/A	unknown function
UniRef90	UHGV-1432287_5	UniRef90_E2ZNP9	251.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1432287_5	748224.HMPREF9436_03328	251.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1432287_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1432287_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_6	phrog_4450	168.1	0	N/A	unknown function
structural_annotation	UHGV-1432287_6	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_7	phrog_820	115.9	2.3e-34	major tail protein	tail
eggNOG-mapper	UHGV-1432287_7	748224.HMPREF9436_03330	337.0	0	N/A	N/A
structural_annotation	UHGV-1432287_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_8	phrog_3266	143.9	4.80645e-43	tail completion	connector
UniRef90	UHGV-1432287_8	UniRef90_UPI001F2730AA	85.5	2.1e-18	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1432287_8	748224.HMPREF9436_03331	291.0	0	N/A	N/A
structural_annotation	UHGV-1432287_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_9	phrog_556	92.0	4e-27	minor head protein	head and packaging
UniRef90	UHGV-1432287_9	UniRef90_UPI000B10EF5E	281.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1432287_9	718252.FP2_06630	259.0	0	Minor capsid protein	N/A
Pfam	UHGV-1432287_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1432287_9	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_10	phrog_3366	111.9	4.2e-33	N/A	unknown function
structural_annotation	UHGV-1432287_10	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_11	phrog_541	85.3	5.8e-25	head-tail adaptor	connector
PHROG	UHGV-1432287_12	phrog_267	88.0	8.4e-26	major head protein	head and packaging
UniRef90	UHGV-1432287_12	UniRef90_A0A0D8J2H9	359.0	0	p22 coat protein 5	N/A
eggNOG-mapper	UHGV-1432287_12	718252.FP2_06660	403.0	0	N/A	N/A
structural_annotation	UHGV-1432287_12	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_13	phrog_194	66.7	4.3e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1432287_13	UniRef90_D4K444	243.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1432287_13	748224.HMPREF9436_03336	229.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1432287_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1432287_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_16	phrog_581	348.9	0	minor head protein	head and packaging
UniRef90	UHGV-1432287_16	UniRef90_UPI001CBDED93	1063.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1432287_16	748224.HMPREF9436_03339	667.0	0	N/A	N/A
Pfam	UHGV-1432287_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1432287_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432287_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_17	phrog_533	263.0	0	portal protein	head and packaging
UniRef90	UHGV-1432287_17	UniRef90_A0A7G9WF85	374.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1432287_17	718252.FP2_06700	703.0	0	N/A	N/A
Pfam	UHGV-1432287_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1432287_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_18	K06909	90.7	1.9e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1432287_18	phrog_2	117.5	1.7e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1432287_18	UniRef90_A0A844EGH8	828.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1432287_18	1449050.JNLE01000003_gene3895	408.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1432287_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1432287_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1432287_18	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_19	phrog_2412	79.5	4.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-1432287_19	742738.HMPREF9460_02504	111.0	9.36e-30	N/A	N/A
PHROG	UHGV-1432287_20	phrog_36	52.4	0.0000000000000096	transcriptional regulator	transcription regulation
UniRef90	UHGV-1432287_20	UniRef90_A0A3E2U224	115.0	2.9e-30	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1432287_20	748224.HMPREF9436_01463	222.0	0	N/A	N/A
structural_annotation	UHGV-1432287_20	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_21	K01160	50.6	0.000000000000048	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1432287_21	phrog_140	94.3	1.2e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432287_21	UniRef90_UPI00122CFAB3	244.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1432287_21	394503.Ccel_3302	146.0	6.88038e-43	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1432287_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1432287_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1432287_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_22	K07505	377.2	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1432287_22	phrog_2597	1098.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432287_22	UniRef90_A0A2A6Z731	1385.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1432287_22	742738.HMPREF9460_01357	887.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1432287_22	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1432287_22	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1432287_22	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1432287_22	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_23	K17677	347.8	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1432287_23	phrog_16	272.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432287_23	UniRef90_A0A3A6K1C0	984.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1432287_23	610130.Closa_1369	755.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-1432287_23	mREase_IV_00005	138.4	5.29999e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1432287_23	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1432287_23	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1432287_23	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1432287_23	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_24	phrog_2698	194.5	0	N/A	unknown function
UniRef90	UHGV-1432287_24	UniRef90_A0A291T9B6	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-1432287_24	394503.Ccel_3308	132.0	4.94e-37	N/A	N/A
structural_annotation	UHGV-1432287_24	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_25	phrog_124	226.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432287_25	UniRef90_UPI00122C2B12	573.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1432287_25	645991.Sgly_0321	364.0	0	AAA domain	N/A
Pfam	UHGV-1432287_25	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1432287_25	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_26	K03546	61.0	1.4e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1432287_26	phrog_1499	466.6	0	N/A	unknown function
UniRef90	UHGV-1432287_26	UniRef90_A0A3A6KBP8	773.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1432287_26	1235798.C817_04766	484.0	0	AAA ATPase domain	N/A
Pfam	UHGV-1432287_26	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1432287_26	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1432287_26	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_27	phrog_1733	50.8	0.000000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1432287_27	665956.HMPREF1032_03597	82.0	0.0000000000000591	DNA binding	N/A
COG	UHGV-1432287_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1432287_27	PF03677	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432287_28	UniRef90_UPI001D0E65C2	110.0	2.94e-29	N/A	N/A
structural_annotation	UHGV-1432287_28	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432287_31	PF12270,NF040944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432287_34	UniRef90_A0A2A7BGV7	79.0	1.16e-17	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1432287_34	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1432287_34	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1432287_34	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_35	phrog_518	120.8	8.3e-36	Rha-like transcriptional regulator	transcription regulation
UniRef90	UHGV-1432287_35	UniRef90_E2ZIF5	378.0	0	Phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-1432287_35	748224.HMPREF9436_01449	378.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1432287_35	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1432287_35	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1432287_35	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1432287_35	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1432287_36	phrog_3292	67.2	2.7e-19	N/A	unknown function
UniRef90	UHGV-1432287_36	UniRef90_A0A1G9YYC5	99.8	3.32e-26	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-1432287_36	1121342.AUCO01000012_gene1704	84.0	1.02e-20	KTSC domain	N/A
Pfam	UHGV-1432287_36	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-1432287_36	COG0433	N/A	N/A	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	N/A
structural_annotation	UHGV-1432287_36	PF13619	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432287_37	UniRef90_UPI001D0EF465	69.7	0.0000000000000369	BC1881 family protein	N/A
eggNOG-mapper	UHGV-1432287_37	748727.CLJU_c31430	53.5	0.0000000107	N/A	N/A
NCBIFam	UHGV-1432287_37	NF033495.1	N/A	N/A	BC1881 family protein	N/A
structural_annotation	UHGV-1432287_39	PF13601,MF_01819,TIGR03433,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-1432287_41	K18830	70.9	1.9e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1432287_41	phrog_8	58.9	4.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1432287_41	UniRef90_A0A564SVW9	211.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-1432287_41	748224.HMPREF9436_01444	187.0	0	N/A	N/A
Pfam	UHGV-1432287_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1432287_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1432287_41	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1432287	Yes	31,050	61	89	1