vOTU vOTU-127817

vOTU: vOTU-127817

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-127817
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00269 → vOTU-127817
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1382062
Biosample ID	N/A
Genome length (bp)	22,346 bps
CheckV completeness	66.34% (Medium-quality)
CDS count	29
CDS density	93.67%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	20	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1382062_1	K15634	69.7	5.3e-20	gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]	N/A
PHROG	UHGV-1382062_1	phrog_12933	189.7	0	N/A	unknown function
UniRef90	UHGV-1382062_1	UniRef90_A0A1X1FN01	376.0	0	Histidine phosphatase family protein	N/A
eggNOG-mapper	UHGV-1382062_1	563037.HMPREF0850_01536	355.0	0	phosphoglycerate mutase family protein	N/A
Pfam	UHGV-1382062_1	PF00300	N/A	N/A	Histidine phosphatase superfamily (branch 1)	His_Phos_1
COG	UHGV-1382062_1	COG0406	N/A	N/A	Broad specificity phosphatase PhoE	N/A
structural_annotation	UHGV-1382062_1	PF00300,MF_01040,NF009994,COG0406	N/A	N/A	N/A	N/A
KOfam	UHGV-1382062_2	K01520	94.7	1.2e-27	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1382062_2	phrog_135	119.7	1.9e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1382062_2	UniRef90_A3CQS3	280.0	0	Deoxyuridinetriphosphatase, putative	N/A
eggNOG-mapper	UHGV-1382062_2	768726.HMPREF9178_1252	293.0	0	dUTPase	N/A
Pfam	UHGV-1382062_2	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1382062_2	NF010561.0	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1382062_2	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1382062_2	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_3	phrog_12172	164.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1382062_3	997830.HMPREF1124_0617	145.0	1.54143e-44	N/A	N/A
KOfam	UHGV-1382062_4	K01447	57.2	3.3e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1382062_4	phrog_1110	338.0	0	endolysin	lysis
UniRef90	UHGV-1382062_4	UniRef90_X8KD37	538.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1382062_4	936580.HMPREF1516_0702	538.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1382062_4	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
Pfam	UHGV-1382062_4	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1382062_4	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1382062_4	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_5	phrog_608	148.4	1.54143e-44	holin	lysis
UniRef90	UHGV-1382062_5	UniRef90_K8MSC6	187.0	0	LL-H family phage holin	N/A
eggNOG-mapper	UHGV-1382062_5	936580.HMPREF1516_0703	182.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1382062_5	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1382062_5	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1382062_6	phrog_199	59.0	6.3e-17	holin	lysis
UniRef90	UHGV-1382062_6	UniRef90_A0A3R9KVL9	241.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-1382062_6	413066.A1EAB5_9CAUD	160.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1382062_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1382062_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1382062_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_7	phrog_1554	262.1	0	N/A	unknown function
UniRef90	UHGV-1382062_7	UniRef90_A0A139Q9H9	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-1382062_7	1035189.HMPREF9954_1920	363.0	0	N/A	N/A
structural_annotation	UHGV-1382062_7	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_8	phrog_12683	130.2	5.1e-39	N/A	unknown function
UniRef90	UHGV-1382062_8	UniRef90_A0A081R6K4	114.0	5.65e-32	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1382062_8	1000588.HMPREF9965_1688	124.0	7.18e-37	N/A	N/A
PHROG	UHGV-1382062_9	phrog_2270	697.5	0	N/A	unknown function
UniRef90	UHGV-1382062_9	UniRef90_K8MFA3	1744.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1382062_9	768726.HMPREF9178_1052	1386.0	0	N/A	N/A
Pfam	UHGV-1382062_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1382062_9	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
Pfam	UHGV-1382062_9	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1382062_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1382062_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1382062_9	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_10	phrog_33	67.2	3.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-1382062_10	UniRef90_F9P1N1	378.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1382062_10	768726.HMPREF9178_1053	378.0	0	N/A	N/A
COG	UHGV-1382062_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1382062_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_11	phrog_58	422.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1382062_11	UniRef90_Q9F4J3	913.0	0	PblA	N/A
eggNOG-mapper	UHGV-1382062_11	768726.HMPREF9178_1054	931.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1382062_11	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-1382062_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382062_11	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_12	phrog_1633	182.5	0	N/A	unknown function
UniRef90	UHGV-1382062_12	UniRef90_UPI00156526D2	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-1382062_12	585203.SMSK564_1277	174.0	0	N/A	N/A
Pfam	UHGV-1382062_12	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1382062_12	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_13	phrog_1526	87.4	1.1e-25	N/A	unknown function
UniRef90	UHGV-1382062_13	UniRef90_A0A0E9GVS8	92.0	1.75e-22	N/A	N/A
eggNOG-mapper	UHGV-1382062_13	1231377.C426_1729	64.3	0.00000000000219	N/A	N/A
PHROG	UHGV-1382062_14	phrog_117	173.0	0	major tail protein	tail
UniRef90	UHGV-1382062_14	UniRef90_A0A1S5SD31	298.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1382062_14	585203.SMSK564_1279	298.0	0	domain, Protein	N/A
COG	UHGV-1382062_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1382062_14	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_15	phrog_123	71.5	1.3e-20	tail terminator	connector
UniRef90	UHGV-1382062_15	UniRef90_A0A0E8ZUI3	187.0	0	Gp45	N/A
eggNOG-mapper	UHGV-1382062_15	585203.SMSK564_1280	157.0	0	N/A	N/A
structural_annotation	UHGV-1382062_15	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_16	phrog_387	89.4	2.5e-26	neck protein	connector
UniRef90	UHGV-1382062_16	UniRef90_A0A0E9GXC0	107.0	4.12e-29	N/A	N/A
eggNOG-mapper	UHGV-1382062_16	1231377.C426_1733	62.8	0.0000000000045	N/A	N/A
PHROG	UHGV-1382062_17	phrog_501	107.0	1.2e-31	head closure Hc1	connector
UniRef90	UHGV-1382062_17	UniRef90_Q7Y4I1	224.0	0	Gp43	N/A
eggNOG-mapper	UHGV-1382062_17	157924.Q7Y4I1_9CAUD	224.0	0	N/A	N/A
structural_annotation	UHGV-1382062_17	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_18	phrog_137	132.7	1.2e-39	head-tail adaptor Ad1	connector
UniRef90	UHGV-1382062_18	UniRef90_Q7Y4I2	236.0	0	Gp42	N/A
eggNOG-mapper	UHGV-1382062_18	768726.HMPREF9178_1061	236.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1382062_18	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1382062_18	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_19	phrog_1539	82.6	3.5e-24	Arc-like repressor	transcription regulation
UniRef90	UHGV-1382062_19	UniRef90_A0A120MHA4	131.0	1.02e-38	HeH domain-containing protein	N/A
Pfam	UHGV-1382062_19	PF12949	N/A	N/A	HeH/LEM domain	HeH
structural_annotation	UHGV-1382062_19	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_20	phrog_32396	134.2	3.09999e-40	N/A	unknown function
UniRef90	UHGV-1382062_20	UniRef90_A0A0M4KD01	569.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1382062_20	585203.SMSK564_1284	564.0	0	Phage capsid family	N/A
structural_annotation	UHGV-1382062_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_21	phrog_233	147.6	8.26766e-44	head scaffolding protein	head and packaging
UniRef90	UHGV-1382062_21	UniRef90_A0A139QHM2	263.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-1382062_21	585203.SMSK564_1285	189.0	0	N/A	N/A
Pfam	UHGV-1382062_21	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1382062_21	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_22	phrog_17688	532.1	0	N/A	unknown function
UniRef90	UHGV-1382062_22	UniRef90_A0A139QHM3	943.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-1382062_22	1321372.AQQB01000060_gene61	766.0	0	Phage Terminase	N/A
COG	UHGV-1382062_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1382062_22	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_23	phrog_2494	398.1	0	minor head protein	head and packaging
UniRef90	UHGV-1382062_23	UniRef90_A0A3E5D5Q7	587.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1382062_23	1321820.HMPREF1983_00936	308.0	0	N/A	N/A
Pfam	UHGV-1382062_23	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
PHROG	UHGV-1382062_24	phrog_104	303.4	0	portal protein	head and packaging
UniRef90	UHGV-1382062_24	UniRef90_A0A139QIE5	810.0	0	Phage portal protein / Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-1382062_24	663952.SDD27957_07300	682.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1382062_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_25	phrog_2862	165.2	0	N/A	unknown function
UniRef90	UHGV-1382062_25	UniRef90_A0A139QHM4	135.0	2.52e-39	Phage-associated protein	N/A
PHROG	UHGV-1382062_26	phrog_36	92.7	3.8e-27	transcriptional regulator	transcription regulation
UniRef90	UHGV-1382062_26	UniRef90_A0A139QHN6	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-1382062_26	1214217.ALNF01000014_gene1384	97.8	5.09e-24	N/A	N/A
Pfam	UHGV-1382062_26	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1382062_26	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1382062_27	phrog_2169	109.5	1.2e-32	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1382062_27	UniRef90_A0A116KZP5	53.1	0.000000623	Phage membrane protein	N/A
eggNOG-mapper	UHGV-1382062_27	1158614.I592_02279	53.1	0.000000119	N/A	N/A
PHROG	UHGV-1382062_28	phrog_98	104.5	7.4e-31	N/A	unknown function
UniRef90	UHGV-1382062_28	UniRef90_A0A237K9M4	162.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1382062_28	1461246.X2KPG8_9VIRU	155.0	0	YopX protein	N/A
Pfam	UHGV-1382062_28	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1382062_28	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1382062_28	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1382062_29	K07319	106.6	1.8e-31	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1382062_29	phrog_23224	224.1	0	DNA methyltransferase	other
UniRef90	UHGV-1382062_29	UniRef90_K8MLM2	447.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1382062_29	1566990.A0A0A0YX44_9CAUD	441.0	0	helicase activity	N/A
PADLOC	UHGV-1382062_29	MTase_II_00172	102.0	1.3e-31	Type II methyltransferase	RM
Pfam	UHGV-1382062_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1382062_29	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1382062	Yes	22,346	40	66	1