vOTU vOTU-128144

vOTU: vOTU-128144

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-128144
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071 → UMGS1071 sp900542375
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-04157 → vGENUS-20435 → vOTU-128144
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071 → UMGS1071 sp900542375
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0290564
Biosample ID	N/A
Genome length (bp)	20,623 bps
CheckV completeness	52.09% (Medium-quality)
CDS count	28
CDS density	92.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071 → UMGS1071 sp900542375	Total connections	49	Host agreement	91.84
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071 → UMGS1071 sp900542375	Total connections	10	Host agreement	90

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.09)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0290564_1	phrog_1067	424.4	0	minor head protein	head and packaging
UniRef90	UHGV-0290564_1	UniRef90_UPI001C1127BE	348.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0290564_1	1408823.AXUS01000025_gene2634	300.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0290564_1	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-0290564_1	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0290564_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0290564_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0290564_1	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_2	phrog_33	84.1	2.8e-24	distal tail protein Dit	tail
UniRef90	UHGV-0290564_2	UniRef90_A0A358PXF7	189.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0290564_2	272562.CA_C0062	166.0	0	tail component	N/A
COG	UHGV-0290564_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0290564_2	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0290564_3	K20282	51.8	0.0000000000000021	GCC2; GRIP and coiled-coil domain-containing protein 2	N/A
PHROG	UHGV-0290564_3	phrog_1272	295.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0290564_3	UniRef90_UPI001EDCC813	438.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0290564_3	908340.HMPREF9406_2570	249.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0290564_3	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0290564_3	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0290564_3	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_4	phrog_4980	103.1	0	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0290564_4	UniRef90_A0A4P8IBH7	73.6	0.0000000000528	Putative superinfection immunity protein	N/A
eggNOG-mapper	UHGV-0290564_4	658086.HMPREF0994_06731	92.8	2.6e-18	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0290564_4	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0290564_4	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0290564_4	PF18933,PF02631,MF_02248,MF_01114,NF008627,NF001062,COG5435,COG2137	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_5	phrog_2115	55.8	0.000000000000001	tail protein	tail
eggNOG-mapper	UHGV-0290564_5	994573.T472_0210995	53.9	0.000000117	N/A	N/A
structural_annotation	UHGV-0290564_5	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_6	phrog_88	95.6	5.4e-28	major tail protein	tail
UniRef90	UHGV-0290564_6	UniRef90_A0A174CNN5	157.0	2.8026e-45	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0290564_6	1235793.C809_01925	146.0	6.89018e-42	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0290564_6	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0290564_6	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0290564_6	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_7	phrog_78	57.2	3.2e-16	tail terminator	connector
UniRef90	UHGV-0290564_7	UniRef90_UPI001C54EC97	66.2	0.00000000000996	N/A	N/A
eggNOG-mapper	UHGV-0290564_7	1195236.CTER_5107	132.0	1.23e-38	N/A	N/A
structural_annotation	UHGV-0290564_7	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_8	phrog_5	62.8	2.4e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0290564_8	UniRef90_R5S8G2	130.0	4.13e-36	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0290564_8	1195236.CTER_5108	90.9	2.23e-21	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-0290564_8	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0290564_8	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0290564_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_9	phrog_25	84.9	7.7e-25	head closure Hc1	connector
UniRef90	UHGV-0290564_9	UniRef90_E7GJW6	114.0	1.14e-30	Phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0290564_9	742740.HMPREF9474_01210	114.0	1.92e-31	Phage head-tail joining protein	N/A
Pfam	UHGV-0290564_9	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0290564_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0290564_9	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0290564_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_10	phrog_40	58.6	8.8e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-0290564_10	UniRef90_UPI000773A5A6	113.0	6.31e-31	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0290564_10	536232.CLM_1660	109.0	2.97e-30	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0290564_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0290564_10	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0290564_10	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_11	phrog_10	156.1	0	major head protein	head and packaging
UniRef90	UHGV-0290564_11	UniRef90_UPI000C76C68B	515.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0290564_11	536232.CLM_1659	489.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0290564_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0290564_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0290564_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0290564_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0290564_12	K01358	133.4	2.4e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0290564_12	phrog_94	231.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0290564_12	UniRef90_R6FVQ7	291.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0290564_12	1567013.A0A0A7RTN2_9CAUD	267.0	0	Clp protease	N/A
Pfam	UHGV-0290564_12	PF00574	N/A	N/A	Clp protease	CLP_protease
structural_annotation	UHGV-0290564_12	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_13	phrog_12	241.8	0	portal protein	head and packaging
UniRef90	UHGV-0290564_13	UniRef90_A0A3F2ZQR1	555.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0290564_13	536232.CLM_1657	557.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0290564_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0290564_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0290564_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0290564_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_14	phrog_9	368.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0290564_14	UniRef90_UPI000773ED19	855.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0290564_14	536232.CLM_1656	840.0	0	Terminase	N/A
Pfam	UHGV-0290564_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0290564_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0290564_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0290564_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_15	phrog_83	99.7	3e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0290564_15	UniRef90_A0A6M0SMA8	178.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0290564_15	536232.CLM_1655	160.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0290564_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0290564_15	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0290564_15	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0290564_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_16	phrog_144	64.9	1.4e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0290564_16	UniRef90_UPI001A9BD19C	139.0	1.14e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0290564_16	536233.CLO_1419	132.0	1.41e-37	HNH endonuclease	N/A
COG	UHGV-0290564_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0290564_17	phrog_36	79.1	6.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0290564_17	UniRef90_A0A6N2R4S8	111.0	9.3e-29	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0290564_17	903814.ELI_1292	78.2	1.38e-16	N/A	N/A
structural_annotation	UHGV-0290564_17	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_18	phrog_599	45.1	0.000000000000079	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0290564_18	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0290564_18	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0290564_18	PF14354,NF007260	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0290564_20	545695.TREAZ_0779	55.5	0.000000156	AAA domain	N/A
COG	UHGV-0290564_20	COG0563	N/A	N/A	Adenylate kinase or related kinase	N/A
PHROG	UHGV-0290564_21	phrog_924	46.3	0.00000000000086	N/A	unknown function
UniRef90	UHGV-0290564_21	UniRef90_A0A6I7G0Z3	137.0	8.74004e-41	N/A	N/A
Pfam	UHGV-0290564_21	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0290564_21	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-0290564_25	K00558	245.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0290564_25	phrog_116	288.9	0	DNA methyltransferase	other
UniRef90	UHGV-0290564_25	UniRef90_A0A6N9QF69	392.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0290564_25	1499683.CCFF01000017_gene2594	377.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0290564_25	MTase_II_00058	291.4	0	Type II methyltransferase	RM
Pfam	UHGV-0290564_25	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0290564_25	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0290564_25	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0290564_25	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0290564_26	phrog_5444	67.2	3.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0290564_26	1239384.K4MPU6_9CAUD	73.2	4.08e-16	N/A	N/A
KOfam	UHGV-0290564_27	K22299	46.5	0.00000000000083	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0290564_27	phrog_5823	52.7	0.0000000000000066	transcriptional regulator	transcription regulation
PADLOC	UHGV-0290564_27	retron_type_VI_hth_cluster2_1	44.1	0.0000000000066	N/A	Retron
Pfam	UHGV-0290564_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0290564_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0290564_28	K01160	60.6	4.8e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0290564_28	phrog_140	113.2	2.2e-33	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0290564_28	UniRef90_A0A356Z6K2	113.0	7.27e-30	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0290564_28	195103.CPF_0942	100.0	7.07e-26	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0290564_28	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0290564_28	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0290564_28	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0290564	Yes	20,623	37	52	1