vOTU vOTU-128771

vOTU: vOTU-128771

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-128771
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01391 → vGENUS-04544 → vOTU-128771
Host lineage	Bacteria → Firmicutes_A → Clostridia → Tissierellales → Peptoniphilaceae → Finegoldia → Finegoldia magna
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1459418
Biosample ID	N/A
Genome length (bp)	22,417 bps
CheckV completeness	60.76% (Medium-quality)
CDS count	36
CDS density	94.67%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Tissierellales → Peptoniphilaceae → Finegoldia → Finegoldia magna	Total connections	30	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Tissierellales → Peptoniphilaceae → Finegoldia → Finegoldia magna	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1459418_1	525282.HMPREF0391_10396	74.7	5.07e-17	N/A	N/A
KOfam	UHGV-1459418_2	K14059	138.9	6.09999e-41	int; integrase	N/A
PHROG	UHGV-1459418_2	phrog_1	143.2	2.29953e-42	integrase	integration and excision
UniRef90	UHGV-1459418_2	UniRef90_A0A2N6SUH1	675.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1459418_2	929506.CbC4_1184	115.0	2.38e-26	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1459418_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1459418_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1459418_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_3	phrog_1847	472.8	0	N/A	unknown function
UniRef90	UHGV-1459418_3	UniRef90_A0A2N6SUL7	711.0	0	N/A	N/A
eggNOG-mapper	UHGV-1459418_3	445974.CLORAM_02968	338.0	0	T5orf172	N/A
Pfam	UHGV-1459418_3	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1459418_3	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1459418_3	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1459418_3	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_4	K01356	168.9	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1459418_4	phrog_4	117.5	1.2e-34	transcriptional repressor	transcription regulation
UniRef90	UHGV-1459418_4	UniRef90_A0A233W5V3	212.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-1459418_4	1000569.HMPREF1040_0381	183.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1459418_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1459418_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
NCBIFam	UHGV-1459418_4	TIGR00498.1	N/A	N/A	transcriptional repressor LexA	N/A
COG	UHGV-1459418_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1459418_4	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459418_5	UniRef90_A0A7C6WLB1	86.7	7.61e-21	N/A	N/A
eggNOG-mapper	UHGV-1459418_5	866775.HMPREF9243_0425	68.9	0.0000000000000147	N/A	N/A
Pfam	UHGV-1459418_5	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1459418_5	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1459418_5	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_6	K07741	118.0	1.8e-34	antB; anti-repressor protein	N/A
PHROG	UHGV-1459418_6	phrog_130	241.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1459418_6	UniRef90_A0A2N6SUH3	451.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-1459418_6	1118057.CAGX01000058_gene110	364.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1459418_6	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1459418_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1459418_6	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1459418_6	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_7	phrog_7735	43.3	0.0000000000052	excisionase	integration and excision
structural_annotation	UHGV-1459418_7	PF21531,NF033787,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_11	K03546	76.7	2.6e-24	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1459418_11	phrog_77	246.2	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_11	UniRef90_A0A233V9S2	1145.0	0	Recombinase RecF	N/A
eggNOG-mapper	UHGV-1459418_11	1118057.CAGX01000058_gene105	500.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1459418_11	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1459418_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1459418_11	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_12	K07455	187.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1459418_12	phrog_148	216.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_12	UniRef90_A0A233V9S1	520.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1459418_12	1499683.CCFF01000017_gene2606	265.0	0	RecT family	N/A
Pfam	UHGV-1459418_12	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1459418_12	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1459418_12	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1459418_12	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_13	K06167	64.5	1.6e-18	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1459418_13	phrog_392	204.8	0	metal-dependent hydrolase	other
UniRef90	UHGV-1459418_13	UniRef90_A0A2N6SUF9	489.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1459418_13	1118055.CAGU01000029_gene41	328.0	0	Beta-lactamase superfamily domain	N/A
Pfam	UHGV-1459418_13	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-1459418_13	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1459418_13	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1459418_13	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_14	K03111	123.2	3.2e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1459418_14	phrog_44	133.8	1.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_14	UniRef90_A0A7D4FW30	256.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1459418_14	334413.FMG_1140	190.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1459418_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1459418_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1459418_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1459418_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1459418_14	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_15	phrog_186	122.8	3.2e-36	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_15	UniRef90_A0A2N6SUG4	546.0	0	DNA replication protein DnaD	N/A
eggNOG-mapper	UHGV-1459418_15	1415775.U729_2588	155.0	2.60642e-43	DnaD domain protein	N/A
Pfam	UHGV-1459418_15	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1459418_15	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1459418_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1459418_15	PF09681,TIGR01446,NF033788,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_16	phrog_190	129.3	2.2e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_16	UniRef90_A0A6I2QU14	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1459418_16	879308.HMPREF9130_0415	124.0	3.31e-35	N/A	N/A
Pfam	UHGV-1459418_16	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1459418_16	PF06356,NF033179	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459418_20	UniRef90_F0H2E6	53.1	0.0000000982	Conserved domain protein	N/A
PHROG	UHGV-1459418_22	phrog_1994	96.3	1.9e-28	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459418_22	UniRef90_A0A133PK76	127.0	1.26e-32	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1459418_22	796940.HMPREF9628_00157	139.0	8.07e-39	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1459418_22	PF09643	N/A	N/A	YopX protein	YopX
Pfam	UHGV-1459418_22	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
NCBIFam	UHGV-1459418_22	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
COG	UHGV-1459418_22	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
PHROG	UHGV-1459418_23	phrog_36	65.8	7.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1459418_23	UniRef90_A0A3A9JA52	73.2	0.0000000000000663	N/A	N/A
eggNOG-mapper	UHGV-1459418_23	1392487.JIAD01000001_gene536	74.3	0.00000000000000335	sigma factor activity	N/A
COG	UHGV-1459418_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1459418_23	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_24	K07451	42.6	0.000000000009	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
UniRef90	UHGV-1459418_24	UniRef90_A0A2N6SUF0	338.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1459418_24	315730.BcerKBAB4_3417	52.4	0.00000829	regulation of methylation-dependent chromatin silencing	N/A
Pfam	UHGV-1459418_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1459418_24	COG3440	N/A	N/A	Predicted restriction endonuclease	N/A
KOfam	UHGV-1459418_25	K07474	133.4	2.8e-39	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1459418_25	phrog_51	135.4	3.60001e-40	terminase small subunit	head and packaging
UniRef90	UHGV-1459418_25	UniRef90_A0A2N6SUJ5	267.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1459418_25	1215915.BN193_09130	138.0	5.14e-40	Terminase small subunit	N/A
Pfam	UHGV-1459418_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1459418_25	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1459418_25	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1459418_26	K06909	356.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1459418_26	phrog_3717	247.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1459418_26	UniRef90_A0A2N6SUF3	840.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1459418_26	1347392.CCEZ01000005_gene1229	631.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1459418_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1459418_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1459418_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1459418_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1459418_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_27	phrog_64	391.6	0	portal protein	head and packaging
UniRef90	UHGV-1459418_27	UniRef90_A0A2N6SUG7	891.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1459418_27	936154.STP_1291	522.0	0	Phage portal protein	N/A
Pfam	UHGV-1459418_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1459418_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1459418_27	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_28	phrog_115	234.6	0	minor head protein	head and packaging
UniRef90	UHGV-1459418_28	UniRef90_A0A2N6SUF2	618.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1459418_28	936154.STP_1290	333.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1459418_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1459418_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1459418_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459418_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459418_29	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_30	phrog_918	102.2	2.1e-30	N/A	unknown function
UniRef90	UHGV-1459418_30	UniRef90_UPI0004D82A84	103.0	2.73e-27	N/A	N/A
eggNOG-mapper	UHGV-1459418_30	525919.Apre_0838	148.0	1.4013e-45	N/A	N/A
Pfam	UHGV-1459418_30	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1459418_30	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_31	phrog_172	155.2	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1459418_31	UniRef90_A0A2N6SUH2	338.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1459418_31	1347392.CCEZ01000005_gene1235	119.0	3.6e-31	N/A	N/A
Pfam	UHGV-1459418_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1459418_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_32	phrog_544	178.7	0	major head protein	head and packaging
UniRef90	UHGV-1459418_32	UniRef90_A0A2N6SUF6	565.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1459418_32	936154.STP_1268	383.0	0	N/A	N/A
structural_annotation	UHGV-1459418_32	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1459418_33	phrog_132	57.8	1.8e-16	head-tail adaptor	connector
UniRef90	UHGV-1459418_33	UniRef90_UPI00110715F1	91.7	1.34e-21	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1459418_33	936154.STP_1267	80.1	7.51e-18	N/A	N/A
structural_annotation	UHGV-1459418_33	PF05135	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459418_34	UniRef90_C5WIA4	62.4	0.000000000171	N/A	N/A
eggNOG-mapper	UHGV-1459418_34	1232430.CAVG010000113_gene1018	56.6	0.00000000524	N/A	N/A
structural_annotation	UHGV-1459418_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459418_35	UniRef90_A0A845R6Y4	111.0	2.12e-29	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1459418_35	936154.STP_1266	91.3	5.26e-22	N/A	N/A
structural_annotation	UHGV-1459418_35	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459418_36	UniRef90_A0A2N6SUF8	175.0	0	N/A	N/A
eggNOG-mapper	UHGV-1459418_36	936154.STP_1265	53.5	0.0000000386	N/A	N/A
Pfam	UHGV-1459418_36	PF16807	N/A	N/A	N/A	DUF5072

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1459418	Yes	22,417	32	61	1