vOTU vOTU-128811

vOTU: vOTU-128811

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-128811
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00449 → vOTU-128811
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0040150
Biosample ID	SAMEA4969174
Genome length (bp)	35,415 bps
CheckV completeness	82.95% (Medium-quality)
CDS count	52
CDS density	94.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	150	Host agreement	86.67
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900545495	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 82.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0040150_1	phrog_4433	165.0	0	N/A	unknown function
UniRef90	UHGV-0040150_1	UniRef90_A0A6M5C839	105.0	2.39e-25	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0040150_1	106648.BBLJ01000054_gene3814	96.3	2e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0040150_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0040150_3	phrog_22529	51.4	0.000000000000015	N/A	unknown function
UniRef90	UHGV-0040150_3	UniRef90_A0A8D9UHA1	211.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0040150_3	658088.HMPREF0987_02675	63.9	0.00000000119	peptidase	N/A
Pfam	UHGV-0040150_3	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0040150_3	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0040150_3	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040150_5	UniRef90_A0A8D9PDM8	135.0	1.6e-40	Pyocin activator protein	N/A
UniRef90	UHGV-0040150_6	UniRef90_A0A8D9PDN2	130.0	2.21e-38	DNA-binding protein	N/A
structural_annotation	UHGV-0040150_6	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040150_9	UniRef90_A0A8D9UHB1	146.0	1.55544e-43	Repressor protein CI	N/A
eggNOG-mapper	UHGV-0040150_9	1507.HMPREF0262_00424	58.5	0.00000000136	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0040150_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0040150_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0040150_9	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_11	phrog_14556	41.6	0.000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0040150_11	1120998.AUFC01000015_gene1569	75.5	0.0000000000000394	competence protein COMEC	N/A
COG	UHGV-0040150_11	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0040150_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0040150_12	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0040150_13	K14059	149.5	3.64338e-44	int; integrase	N/A
PHROG	UHGV-0040150_13	phrog_1	167.6	0	integrase	integration and excision
UniRef90	UHGV-0040150_13	UniRef90_A0A8D9UGU2	652.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0040150_13	693746.OBV_41260	303.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0040150_13	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0040150_13	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0040150_13	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0040150_14	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_15	phrog_20016	205.4	0	N/A	unknown function
UniRef90	UHGV-0040150_15	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0040150_15	397290.C810_05214	172.0	0	N/A	N/A
structural_annotation	UHGV-0040150_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_16	phrog_16490	155.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0040150_16	1408437.JNJN01000043_gene803	142.0	3.71e-39	N/A	N/A
PHROG	UHGV-0040150_17	phrog_22984	82.2	5.1e-24	N/A	unknown function
PHROG	UHGV-0040150_18	phrog_21718	101.3	9.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0040150_18	397290.C810_05210	74.7	0.00000000000000685	N/A	N/A
PHROG	UHGV-0040150_19	phrog_3754	92.4	5.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0040150_19	476272.RUMHYD_01764	160.0	0	N/A	N/A
PHROG	UHGV-0040150_20	phrog_22978	839.3	0	N/A	unknown function
UniRef90	UHGV-0040150_20	UniRef90_A0A396KH15	399.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0040150_20	1410650.JHWL01000003_gene2814	264.0	0	N/A	N/A
eggNOG-mapper	UHGV-0040150_21	1410650.JHWL01000003_gene2815	71.6	0.0000000000496	N/A	N/A
UniRef90	UHGV-0040150_22	UniRef90_A0A8D9UGT1	108.0	7.61e-28	Sigma C capsid protein	N/A
PHROG	UHGV-0040150_23	phrog_511	224.3	0	internal virion protein	head and packaging
UniRef90	UHGV-0040150_23	UniRef90_A0A8D9UH72	808.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0040150_23	1226322.HMPREF1545_00785	311.0	0	N/A	N/A
structural_annotation	UHGV-0040150_23	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_24	phrog_12105	85.8	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0040150_24	1519439.JPJG01000060_gene1891	63.5	0.0000000000251	N/A	N/A
KOfam	UHGV-0040150_25	K01448	48.9	0.000000000000092	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0040150_25	phrog_435	69.4	7.1e-20	endolysin	lysis
UniRef90	UHGV-0040150_25	UniRef90_A0A810PUG7	210.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0040150_25	411473.RUMCAL_02267	99.4	1.03e-21	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0040150_25	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0040150_25	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0040150_25	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0040150_25	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_26	phrog_881	89.4	2e-26	holin	lysis
UniRef90	UHGV-0040150_26	UniRef90_UPI00189D3A4F	86.7	9.03e-21	phage holin	N/A
eggNOG-mapper	UHGV-0040150_26	742740.HMPREF9474_02251	83.6	2.78e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0040150_26	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0040150_26	PF16938,COG3237	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_27	phrog_4105	99.1	2.9e-29	N/A	unknown function
UniRef90	UHGV-0040150_27	UniRef90_A0A8D9UHA9	141.0	1.12006e-41	Holin protein	N/A
eggNOG-mapper	UHGV-0040150_27	742733.HMPREF9469_05011	117.0	8.48e-33	N/A	N/A
PHROG	UHGV-0040150_28	phrog_5073	40.4	0.000000000025	tail fiber protein	tail
eggNOG-mapper	UHGV-0040150_28	1408437.JNJN01000002_gene1389	58.9	0.00000112	N/A	N/A
Pfam	UHGV-0040150_28	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0040150_28	PF04862,NF033675	N/A	N/A	N/A	N/A
KOfam	UHGV-0040150_29	K07296	40.2	0.000000000031	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0040150_29	phrog_366	41.9	0.000000000011	tail fiber protein	tail
Pfam	UHGV-0040150_29	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0040150_29	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_30	phrog_15239	88.3	3.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0040150_30	1449126.JQKL01000003_gene1694	51.6	0.00000193	N/A	N/A
PHROG	UHGV-0040150_31	phrog_1357	260.4	0	major head protein	head and packaging
UniRef90	UHGV-0040150_31	UniRef90_A0A8D9UH64	706.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0040150_31	1449126.JQKL01000003_gene1695	425.0	0	N/A	N/A
Pfam	UHGV-0040150_31	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0040150_31	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0040150_31	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_32	phrog_13908	300.9	0	N/A	unknown function
UniRef90	UHGV-0040150_32	UniRef90_A0A844DRV7	112.0	2.92e-24	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0040150_32	1410650.JHWL01000003_gene2831	119.0	1.42e-28	N/A	N/A
UniRef90	UHGV-0040150_33	UniRef90_A0A8D9PDR6	164.0	0	YsxB-like protein	N/A
Pfam	UHGV-0040150_33	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0040150_33	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_34	phrog_156	332.3	0	portal protein	head and packaging
UniRef90	UHGV-0040150_34	UniRef90_A0A8D9UH10	1130.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0040150_34	748224.HMPREF9436_01396	533.0	0	N/A	N/A
structural_annotation	UHGV-0040150_34	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0040150_35	K06909	121.2	1.1e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0040150_35	phrog_979	197.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0040150_35	UniRef90_A0A8D9PDR5	949.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0040150_35	657322.FPR_02290	610.0	0	Terminase-like family	N/A
Pfam	UHGV-0040150_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0040150_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0040150_35	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040150_36	UniRef90_A0A8D9PDT2	177.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0040150_36	1226322.HMPREF1545_00042	138.0	1.63e-39	N/A	N/A
structural_annotation	UHGV-0040150_36	PF04218,COG3677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040150_40	UniRef90_A0A8D9PDT5	59.7	0.00000000333	Hydrogenase/urease nickel incorporation protein	N/A
UniRef90	UHGV-0040150_42	UniRef90_A0A8D9PDQ6	143.0	2.158e-43	Restriction alleviation protein	N/A
Pfam	UHGV-0040150_42	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0040150_42	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_44	phrog_3136	147.6	3.22299e-44	N/A	unknown function
UniRef90	UHGV-0040150_44	UniRef90_UPI001CBCD733	166.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0040150_44	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0040150_44	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_45	phrog_38832	68.0	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0040150_45	665956.HMPREF1032_00143	70.1	0.000000000000935	N/A	N/A
structural_annotation	UHGV-0040150_45	PF10781	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040150_47	UniRef90_A0A8D9PDK1	137.0	2.55e-40	Anti-repressor	N/A
KOfam	UHGV-0040150_49	K00558	43.8	0.0000000000019	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0040150_49	phrog_757	127.9	5.9e-38	DNA methyltransferase	other
UniRef90	UHGV-0040150_49	UniRef90_A0A8D9PDD1	467.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-0040150_49	622312.ROSEINA2194_01264	377.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0040150_49	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0040150_49	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0040150_49	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0040150_52	phrog_190	47.0	0.00000000000039	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040150_52	UniRef90_A0A8D9PDD6	150.0	4.2039e-45	Endonuclease	N/A
eggNOG-mapper	UHGV-0040150_52	1226322.HMPREF1545_00295	84.0	1.79e-19	N/A	N/A
Pfam	UHGV-0040150_52	PF06356	N/A	N/A	N/A	DUF1064

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0040150	Yes	35,415	57	83	1