vOTU vOTU-129001

vOTU: vOTU-129001

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-129001
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-06318 → vGENUS-15691 → vOTU-129001
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1288246
Biosample ID	N/A
Genome length (bp)	31,574 bps
CheckV completeness	89.45% (Medium-quality)
CDS count	46
CDS density	95.95%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1288246_1	phrog_9	274.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1288246_1	UniRef90_A0A3D1VAR5	781.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1288246_1	1226322.HMPREF1545_00113	712.0	0	Phage Terminase	N/A
Pfam	UHGV-1288246_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
Pfam	UHGV-1288246_1	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1288246_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1288246_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1288246_1	PF03354,PF20441,PF05119,MF_04146,TIGR01547,TIGR01558,COG4626,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_2	phrog_12	160.8	0	portal protein	head and packaging
UniRef90	UHGV-1288246_2	UniRef90_A0A8G1TPJ1	464.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1288246_2	1121423.JONT01000042_gene1421	446.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1288246_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1288246_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1288246_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1288246_2	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_3	K06904	150.9	1.12104e-44	N/A	N/A
PHROG	UHGV-1288246_3	phrog_80	168.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1288246_3	UniRef90_A0A3D2W384	219.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1288246_3	491915.Aflv_0663	203.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1288246_3	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1288246_3	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1288246_3	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1288246_3	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_4	phrog_10	171.0	0	major head protein	head and packaging
UniRef90	UHGV-1288246_4	UniRef90_A0A1Y4R494	442.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1288246_4	1226322.HMPREF1545_00116	356.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1288246_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1288246_4	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1288246_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1288246_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1288246_4	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1288246_5	1232446.BAIE02000002_gene827	52.0	0.000000171	N/A	N/A
PHROG	UHGV-1288246_6	phrog_19734	59.4	7.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1288246_6	1235798.C817_04587	58.5	0.00000000192	N/A	N/A
structural_annotation	UHGV-1288246_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_7	phrog_5	49.2	0.00000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-1288246_7	UniRef90_UPI000EFB19A4	98.6	4e-24	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1288246_7	411471.SUBVAR_05855	97.1	2.94e-24	N/A	N/A
Pfam	UHGV-1288246_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1288246_7	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1288246_8	1341151.ASZU01000004_gene256	75.9	1.63e-16	N/A	N/A
structural_annotation	UHGV-1288246_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_9	phrog_88	172.0	0	major tail protein	tail
UniRef90	UHGV-1288246_9	UniRef90_A0A1Y3R915	281.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1288246_9	1226322.HMPREF1545_00121	236.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1288246_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1288246_9	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_10	phrog_709	119.1	1.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-1288246_10	1235802.C823_01526	120.0	4.92e-33	N/A	N/A
structural_annotation	UHGV-1288246_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_11	phrog_3033	63.2	3.4e-18	N/A	unknown function
UniRef90	UHGV-1288246_11	UniRef90_D9R5H0	69.7	0.0000000000000104	Phage-like protein	N/A
eggNOG-mapper	UHGV-1288246_11	1321782.HMPREF1986_01364	70.9	6.07e-16	N/A	N/A
PHROG	UHGV-1288246_12	phrog_23464	310.5	0	N/A	unknown function
UniRef90	UHGV-1288246_12	UniRef90_A0A318XNK8	202.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1288246_12	1211814.CAPG01000074_gene3445	192.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1288246_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1288246_12	PF20155,TIGR02971,COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1288246_13	1226322.HMPREF1545_00060	58.9	0.00000000273	N/A	N/A
structural_annotation	UHGV-1288246_13	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_14	phrog_32744	726.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1288246_14	1120998.AUFC01000030_gene2247	231.0	0	N/A	N/A
structural_annotation	UHGV-1288246_14	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1288246_15	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_16	phrog_199	49.0	0.000000000000058	holin	lysis
eggNOG-mapper	UHGV-1288246_16	693746.OBV_20230	221.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1288246_16	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
COG	UHGV-1288246_16	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
KOfam	UHGV-1288246_18	K01448	145.2	5.89947e-43	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1288246_18	phrog_18955	218.1	0	N/A	unknown function
UniRef90	UHGV-1288246_18	UniRef90_A0A810Q4Z7	373.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_18	1226322.HMPREF1545_00133	318.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1288246_18	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1288246_18	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1288246_18	PF01520,PF09992,MF_00417,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_19	K14059	121.5	1.2e-35	int; integrase	N/A
PHROG	UHGV-1288246_19	phrog_1	121.9	6.7e-36	integrase	integration and excision
UniRef90	UHGV-1288246_19	UniRef90_UPI00195CC1EE	436.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1288246_19	1460635.JCM19038_3434	92.0	1.95e-18	Phage integrase family	N/A
Pfam	UHGV-1288246_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1288246_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1288246_19	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_21	phrog_888	103.0	2.3e-31	N/A	unknown function
UniRef90	UHGV-1288246_21	UniRef90_A0A3M8HAZ0	251.0	0	N/A	N/A
eggNOG-mapper	UHGV-1288246_21	1410653.JHVC01000013_gene3717	197.0	0	Bacterial PH domain	N/A
Pfam	UHGV-1288246_21	PF14470	N/A	N/A	Bacterial PH domain	bPH_3
Pfam	UHGV-1288246_21	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1288246_21	PF15947,PF14471	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_22	K01356	154.7	1.4013e-45	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1288246_22	phrog_4	142.3	3.89981e-42	transcriptional repressor	transcription regulation
UniRef90	UHGV-1288246_22	UniRef90_A0A1Y4KMC0	222.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_22	1203606.HMPREF1526_00998	207.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1288246_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1288246_22	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1288246_22	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1288246_22	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_25	K22300	51.4	0.000000000000025	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1288246_25	phrog_8	55.7	0.0000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1288246_25	UniRef90_A0A096AZ92	71.2	0.00000000000000634	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_25	742738.HMPREF9460_04041	71.2	0.00000000000000106	sequence-specific DNA binding	N/A
Pfam	UHGV-1288246_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1288246_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1288246_25	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1288246_26	UniRef90_UPI000F0633F9	88.6	1.73e-21	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1288246_26	1235835.C814_03153	76.3	2.6e-17	N/A	N/A
PHROG	UHGV-1288246_27	phrog_6499	114.0	6.1e-34	transcriptional regulator	transcription regulation
UniRef90	UHGV-1288246_27	UniRef90_G4L1G1	175.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_27	693746.OBV_19800	175.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1288246_27	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1288246_27	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1288246_27	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1288246_29	693746.OBV_27460	47.4	0.00000249	N/A	N/A
PHROG	UHGV-1288246_30	phrog_270	111.2	1.2e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1288246_30	UniRef90_UPI00195D2180	189.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_30	1201292.DR75_1531	111.0	3.06e-26	Helix-turn-helix domain	N/A
Pfam	UHGV-1288246_30	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1288246_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1288246_30	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_31	K02314	349.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1288246_31	phrog_19	251.3	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1288246_31	UniRef90_UPI001C0112E5	286.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1288246_31	1007096.BAGW01000006_gene1864	258.0	0	Replicative DNA helicase	N/A
Pfam	UHGV-1288246_31	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1288246_31	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1288246_31	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1288246_31	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_32	K03496	193.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1288246_32	phrog_164	141.5	6.09985e-42	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1288246_32	UniRef90_G4L1G6	229.0	0	Chromosome partitioning protein ParA	N/A
eggNOG-mapper	UHGV-1288246_32	693746.OBV_19850	229.0	0	Anion-transporting ATPase	N/A
Pfam	UHGV-1288246_32	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1288246_32	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1288246_32	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_33	K03497	104.8	1.5e-30	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1288246_33	phrog_27290	148.0	0	N/A	unknown function
UniRef90	UHGV-1288246_33	UniRef90_UPI001BB4839F	558.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1288246_33	693746.OBV_19860	139.0	3.51e-33	ParB-like nuclease domain	N/A
Pfam	UHGV-1288246_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1288246_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1288246_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1288246_33	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1288246_35	1007096.BAGW01000011_gene2365	48.5	0.00000173	N/A	N/A
KOfam	UHGV-1288246_37	K06223	227.3	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1288246_37	phrog_56	194.1	0	DNA methyltransferase	other
UniRef90	UHGV-1288246_37	UniRef90_UPI00067EFF20	431.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1288246_37	610130.Closa_0735	355.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1288246_37	MTase_II_00030	272.7	0	Type II methyltransferase	RM
Pfam	UHGV-1288246_37	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1288246_37	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1288246_37	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_40	K03111	144.0	1.60028e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1288246_40	phrog_44	141.9	4.1002e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1288246_40	UniRef90_UPI001BB47F69	232.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1288246_40	1007096.BAGW01000007_gene1922	209.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1288246_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1288246_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1288246_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1288246_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1288246_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1288246_41	UniRef90_UPI001BB4805C	117.0	2.88e-30	N/A	N/A
PHROG	UHGV-1288246_42	phrog_38832	40.1	0.000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1288246_42	665956.HMPREF1032_00143	50.4	0.00000789	N/A	N/A
structural_annotation	UHGV-1288246_44	PF19070	N/A	N/A	N/A	N/A
PHROG	UHGV-1288246_45	phrog_3584	98.4	6.1e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1288246_45	742738.HMPREF9460_04063	337.0	0	N/A	N/A
structural_annotation	UHGV-1288246_45	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-1288246_46	K07451	42.5	0.000000000011	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1288246_46	phrog_119	74.6	1.4e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1288246_46	UniRef90_A0A7C6HGS4	128.0	7.48e-37	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1288246_46	642492.Clole_0739	115.0	6.48e-32	HNH nucleases	N/A
Pfam	UHGV-1288246_46	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1288246_46	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1288246_46	TIGR02646	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1288246	Yes	31,574	57	89	1