vOTU vOTU-129420

vOTU: vOTU-129420

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-129420
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum lactatifermentans
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01482 → vGENUS-02372 → vOTU-129420
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum lactatifermentans
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0053479
Biosample ID	N/A
Genome length (bp)	23,317 bps
CheckV completeness	59.05% (Medium-quality)
CDS count	43
CDS density	92.52%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	3	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum lactatifermentans	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0053479_1	K14059	226.4	0	int; integrase	N/A
PHROG	UHGV-0053479_1	phrog_1	196.1	0	integrase	integration and excision
UniRef90	UHGV-0053479_1	UniRef90_A0A0X8VAG8	313.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0053479_1	742738.HMPREF9460_01344	233.0	0	Phage integrase family	N/A
Pfam	UHGV-0053479_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0053479_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0053479_1	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0053479_2	K07448	43.9	0.0000000000032	mrr; restriction system protein	N/A
UniRef90	UHGV-0053479_2	UniRef90_A0A6I3PLJ9	388.0	0	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-0053479_2	1249480.B649_06030	61.6	0.0000000987	Restriction endonuclease	N/A
Pfam	UHGV-0053479_2	PF13156	N/A	N/A	Restriction endonuclease	Mrr_cat_2
COG	UHGV-0053479_2	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
KOfam	UHGV-0053479_3	K01356	139.4	4.49999e-41	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0053479_3	phrog_4	123.6	2.2e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-0053479_3	UniRef90_UPI00129D82BA	285.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0053479_3	1121423.JONT01000002_gene2372	186.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0053479_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0053479_3	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0053479_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0053479_3	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0053479_4	UniRef90_A0A4S2AF05	99.0	7.89e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0053479_4	768486.EHR_02785	72.4	4.84e-16	N/A	N/A
structural_annotation	UHGV-0053479_4	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0053479_7	PF06257,COG4466	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_9	phrog_24518	75.0	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0053479_9	1519439.JPJG01000077_gene922	69.7	0.00000000000911	N/A	N/A
PHROG	UHGV-0053479_11	phrog_3777	62.8	3.6e-18	N/A	unknown function
UniRef90	UHGV-0053479_11	UniRef90_UPI0019617347	116.0	8.73e-32	N/A	N/A
eggNOG-mapper	UHGV-0053479_11	1235797.C816_01270	62.8	0.0000000000202	N/A	N/A
Pfam	UHGV-0053479_11	PF12957	N/A	N/A	N/A	DUF3846
COG	UHGV-0053479_11	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-0053479_11	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_12	phrog_3584	180.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053479_12	UniRef90_I2E8X7	82.4	0.00000000000000354	Gp31	N/A
eggNOG-mapper	UHGV-0053479_12	536233.CLO_3655	91.7	4.98e-19	N/A	N/A
structural_annotation	UHGV-0053479_12	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_13	phrog_7566	88.1	7.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0053479_13	1118057.CAGX01000020_gene1648	49.7	0.00000912	N/A	N/A
eggNOG-mapper	UHGV-0053479_14	657322.FPR_23450	131.0	2.34e-38	N/A	N/A
UniRef90	UHGV-0053479_16	UniRef90_R7B8M3	186.0	0	N/A	N/A
Pfam	UHGV-0053479_16	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0053479_21	K03111	127.8	1.4e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0053479_21	phrog_44	132.6	3e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053479_21	UniRef90_UPI001961C9E0	241.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0053479_21	97138.C820_02339	162.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0053479_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0053479_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0053479_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0053479_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0053479_21	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_22	phrog_29443	40.5	0.000000000034	N/A	unknown function
UniRef90	UHGV-0053479_22	UniRef90_UPI00044D3944	54.3	0.0000000128	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0053479_22	908340.HMPREF9406_1089	58.5	0.00000000143	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
COG	UHGV-0053479_22	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0053479_23	phrog_1384	123.0	2.3e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0053479_23	665956.HMPREF1032_03086	246.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0053479_23	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_26	phrog_25385	41.6	0.000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0053479_26	476272.RUMHYD_03328	56.6	0.00000000582	N/A	N/A
PHROG	UHGV-0053479_28	phrog_20532	50.4	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-0053479_28	1232443.BAIA02000066_gene981	59.7	0.00000000426	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-0053479_28	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-0053479_29	phrog_17690	135.2	1.90001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0053479_29	665950.HMPREF1025_02546	134.0	5.82e-39	N/A	N/A
Pfam	UHGV-0053479_32	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0053479_32	PF01402,NF010256	N/A	N/A	N/A	N/A
UniRef90	UHGV-0053479_33	UniRef90_A0A316PCJ0	68.2	0.00000000000267	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0053479_33	1461580.CCAS010000078_gene4207	48.1	0.00000606	N/A	N/A
Pfam	UHGV-0053479_35	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
KOfam	UHGV-0053479_36	K06909	114.1	1.7e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0053479_36	phrog_979	209.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0053479_36	UniRef90_A0A416JVL2	692.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0053479_36	748224.HMPREF9436_02548	681.0	0	Terminase-like family	N/A
Pfam	UHGV-0053479_36	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0053479_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0053479_36	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_37	phrog_156	311.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0053479_37	748224.HMPREF9436_01396	537.0	0	N/A	N/A
structural_annotation	UHGV-0053479_37	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0053479_38	K07584	75.3	1.1e-21	N/A	N/A
PHROG	UHGV-0053479_38	phrog_4478	60.4	2.3e-17	peptidase	other
UniRef90	UHGV-0053479_38	UniRef90_A0A350D9X6	66.2	0.00000000000846	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0053479_38	926561.KB900617_gene1817	60.1	0.000000000356	Cysteine protease Prp	N/A
Pfam	UHGV-0053479_38	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0053479_38	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0053479_38	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_39	phrog_13908	232.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0053479_39	1410650.JHWL01000003_gene2831	124.0	2.11e-30	N/A	N/A
PHROG	UHGV-0053479_40	phrog_1357	272.9	0	major head protein	head and packaging
UniRef90	UHGV-0053479_40	UniRef90_A0A358AS35	384.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0053479_40	718252.FP2_29220	333.0	0	N/A	N/A
NCBIFam	UHGV-0053479_40	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0053479_40	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0053479_41	phrog_15239	48.6	8.5e-16	N/A	unknown function
UniRef90	UHGV-0053479_41	UniRef90_R5AJ41	88.2	3.39e-19	Conserved domain protein	N/A
KOfam	UHGV-0053479_42	K16628	224.8	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0053479_42	phrog_819	155.3	0	tail protein	tail
eggNOG-mapper	UHGV-0053479_42	1232443.BAIA02000078_gene14	84.0	0.0000000000000694	nuclear chromosome segregation	N/A
Pfam	UHGV-0053479_42	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0053479_42	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0053479	Yes	23,317	45	59	1