vOTU vOTU-130122

vOTU: vOTU-130122

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-130122
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01046 → vOTU-130122
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1521450
Biosample ID	N/A
Genome length (bp)	20,444 bps
CheckV completeness	59.86% (Medium-quality)
CDS count	24
CDS density	96.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	110	Host agreement	90.91
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1521450_1	1262449.CP6013_2082	168.0	0	N/A	N/A
structural_annotation	UHGV-1521450_1	PF11631,TIGR03066	N/A	N/A	N/A	N/A
KOfam	UHGV-1521450_2	K14059	144.0	1.60028e-42	int; integrase	N/A
PHROG	UHGV-1521450_2	phrog_1	150.1	1.68156e-44	integrase	integration and excision
UniRef90	UHGV-1521450_2	UniRef90_UPI001EDEB0AD	277.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1521450_2	1226322.HMPREF1545_00144	248.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1521450_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1521450_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1521450_2	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_3	phrog_25567	53.1	0.0000000000000046	N/A	unknown function
eggNOG-mapper	UHGV-1521450_3	1235798.C817_04600	84.3	1.13e-19	N/A	N/A
Pfam	UHGV-1521450_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1521450_3	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-1521450_6	K01447	89.4	5.8e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1521450_6	phrog_1493	166.0	0	endolysin	lysis
UniRef90	UHGV-1521450_6	UniRef90_A0A350TLR9	300.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1521450_6	1280698.AUJS01000007_gene1059	213.0	0	Ami_2	N/A
Pfam	UHGV-1521450_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1521450_6	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1521450_6	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1521450_6	PF01510,PF01471,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_7	phrog_199	74.4	1.1e-21	holin	lysis
UniRef90	UHGV-1521450_7	UniRef90_R6DA24	171.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1521450_7	1160721.RBI_I01565	129.0	1.79e-35	Bacteriophage holin family	N/A
Pfam	UHGV-1521450_7	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1521450_7	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1521450_7	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1521450_7	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1521450_8	UniRef90_UPI001BF10870	174.0	2.0459e-43	Tyrosine-protein phosphatase	N/A
Pfam	UHGV-1521450_8	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
PHROG	UHGV-1521450_10	phrog_1067	291.9	0	minor head protein	head and packaging
UniRef90	UHGV-1521450_10	UniRef90_A0A1C6H6B4	392.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1521450_10	1123263.AUKY01000068_gene489	300.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1521450_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1521450_10	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1521450_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1521450_10	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_11	phrog_33	70.2	5.1e-20	distal tail protein Dit	tail
UniRef90	UHGV-1521450_11	UniRef90_A0A173Z1X4	176.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1521450_11	1123263.AUKY01000068_gene490	122.0	2.28e-31	tail component	N/A
COG	UHGV-1521450_11	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1521450_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_12	phrog_58	101.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1521450_12	UniRef90_A0A1Y4R6K5	167.0	7.01e-40	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1521450_12	588581.Cpap_1264	188.0	0	Tail tape measure protein, TP901 family	N/A
COG	UHGV-1521450_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1521450_12	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_15	phrog_88	85.0	9.5e-25	major tail protein	tail
UniRef90	UHGV-1521450_15	UniRef90_G9YSC5	128.0	8.09e-34	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1521450_15	33035.JPJF01000039_gene278	74.3	0.000000000000108	N/A	N/A
NCBIFam	UHGV-1521450_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1521450_15	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_16	phrog_5	41.3	0.000000000036	tail completion or Neck1 protein	connector
UniRef90	UHGV-1521450_16	UniRef90_A0A1C6FG30	139.0	2.87e-39	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1521450_16	908340.HMPREF9406_2573	129.0	3.47e-36	N/A	N/A
structural_annotation	UHGV-1521450_16	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1521450_17	1235798.C817_04588	82.4	8.54e-19	N/A	N/A
structural_annotation	UHGV-1521450_17	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_18	phrog_19734	116.6	1.5e-34	N/A	unknown function
UniRef90	UHGV-1521450_18	UniRef90_A0A6I7GNS7	128.0	1.02e-35	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1521450_18	349161.Dred_2602	90.1	1.28e-21	N/A	N/A
structural_annotation	UHGV-1521450_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_19	phrog_749	69.1	5.6e-20	N/A	unknown function
UniRef90	UHGV-1521450_19	UniRef90_UPI001C0FB8A8	53.9	0.000000246	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1521450_19	349161.Dred_2603	77.8	2.21e-17	N/A	N/A
PHROG	UHGV-1521450_20	phrog_10	138.9	5.29999e-41	major head protein	head and packaging
UniRef90	UHGV-1521450_20	UniRef90_G9YSC0	687.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1521450_20	1235792.C808_00086	417.0	0	Phage capsid family	N/A
Pfam	UHGV-1521450_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1521450_20	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1521450_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1521450_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1521450_20	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1521450_21	K01358	123.8	1.9e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1521450_21	phrog_94	239.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1521450_21	UniRef90_A0A1Y4BT12	342.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1521450_21	349161.Dred_2605	295.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1521450_21	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1521450_21	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1521450_21	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_22	phrog_12	113.9	4.9e-34	portal protein	head and packaging
UniRef90	UHGV-1521450_22	UniRef90_G9YSB8	508.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1521450_22	610130.Closa_0742	291.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1521450_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1521450_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1521450_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1521450_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_23	phrog_9	243.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1521450_23	UniRef90_UPI0018737C02	902.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1521450_23	1235792.C808_00083	597.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1521450_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1521450_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1521450_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1521450_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1521450_24	phrog_5110	62.2	5.5e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1521450_24	UniRef90_UPI00195E8788	124.0	3.32e-33	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1521450_24	1265845.PWEIH_00610	51.2	0.00000738	Phage terminase, small subunit	N/A
Pfam	UHGV-1521450_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1521450_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1521450	Yes	20,444	59	60	1