vOTU vOTU-130381

vOTU: vOTU-130381

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-130381
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vOTU-130381
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ventrimonas
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1310908
Biosample ID	N/A
Genome length (bp)	20,422 bps
CheckV completeness	51.31% (Medium-quality)
CDS count	33
CDS density	86.36%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ventrimonas	Total connections	7	Host agreement	85.71
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ventrimonas → Ventrimonas sp003480315	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1310908_3	phrog_6058	44.1	0.0000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1310908_3	1462527.CCDM010000010_gene482	48.5	0.00000117	N/A	N/A
Pfam	UHGV-1310908_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-1310908_5	phrog_31760	66.1	3.5e-19	N/A	unknown function
PHROG	UHGV-1310908_6	phrog_8	49.5	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1310908_6	UniRef90_A0A417C403	125.0	8e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1310908_6	1201292.DR75_1541	64.7	0.000000000000273	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1310908_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1310908_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1310908_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1310908_7	K22299	46.6	0.00000000000081	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1310908_7	phrog_8	61.8	1.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1310908_7	UniRef90_A0A417C2R0	246.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1310908_7	411460.RUMTOR_02056	146.0	3.44719e-43	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1310908_7	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1310908_7	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1310908_7	PF12844,MF_00584,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_8	phrog_87	92.3	3.8e-27	metallo-protease	other
UniRef90	UHGV-1310908_8	UniRef90_A0A3R6LPT6	276.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1310908_8	411460.RUMTOR_02055	181.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1310908_8	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1310908_8	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1310908_8	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-1310908_9	UniRef90_A0A3R6Q1U3	419.0	0	NINE protein	N/A
eggNOG-mapper	UHGV-1310908_9	742740.HMPREF9474_03106	149.0	1.82029e-42	TM2 domain	N/A
Pfam	UHGV-1310908_9	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1310908_9	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1310908_10	K14059	127.6	1.6e-37	int; integrase	N/A
PHROG	UHGV-1310908_10	phrog_1	149.6	2.94273e-44	integrase	integration and excision
UniRef90	UHGV-1310908_10	UniRef90_G5FHB3	559.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1310908_10	585394.RHOM_14030	258.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1310908_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1310908_10	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1310908_10	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1310908_11	K17733	151.0	7.00649e-45	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1310908_11	phrog_2649	134.2	1.3e-39	endolysin	lysis
UniRef90	UHGV-1310908_11	UniRef90_A0A416FC87	422.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1310908_11	397290.C810_03258	214.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-1310908_11	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
Pfam	UHGV-1310908_11	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1310908_11	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-1310908_11	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_12	phrog_918	129.3	9.3e-39	N/A	unknown function
UniRef90	UHGV-1310908_12	UniRef90_UPI00115A7D93	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-1310908_12	469618.FVAG_01307	140.0	1.53022e-42	N/A	N/A
Pfam	UHGV-1310908_12	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1310908_12	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_13	phrog_1048	167.5	0	N/A	unknown function
UniRef90	UHGV-1310908_13	UniRef90_A0A416L221	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-1310908_13	457412.RSAG_01107	255.0	0	N/A	N/A
Pfam	UHGV-1310908_13	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1310908_13	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1310908_13	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_14	phrog_1129	76.3	2.7e-22	holin	lysis
UniRef90	UHGV-1310908_14	UniRef90_A0A3R6U6I1	161.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1310908_14	1321782.HMPREF1986_00360	103.0	4.58e-28	N/A	N/A
Pfam	UHGV-1310908_14	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1310908_14	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_15	phrog_4105	99.4	2.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1310908_15	657322.FPR_27220	103.0	2.33e-27	N/A	N/A
UniRef90	UHGV-1310908_17	UniRef90_A0A3R6QNF9	69.7	0.00000000000000329	ASCH domain-containing protein	N/A
NCBIFam	UHGV-1310908_17	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-1310908_18	phrog_12931	78.5	8.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1310908_18	1298920.KI911353_gene2672	80.9	1.42e-17	N/A	N/A
COG	UHGV-1310908_19	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-1310908_20	K03733	228.4	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1310908_20	phrog_1	164.4	0	integrase	integration and excision
UniRef90	UHGV-1310908_20	UniRef90_A0A416L1N4	574.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1310908_20	610130.Closa_3343	496.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1310908_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1310908_20	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1310908_20	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_21	phrog_2012	50.3	0.000000000000041	minor tail protein	tail
eggNOG-mapper	UHGV-1310908_21	563119.B5U4M2_9CAUD	52.8	0.00000659	N/A	N/A
eggNOG-mapper	UHGV-1310908_23	411461.DORFOR_01184	67.0	0.000000000000142	N/A	N/A
structural_annotation	UHGV-1310908_23	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_24	phrog_32322	128.5	1.4e-38	N/A	unknown function
UniRef90	UHGV-1310908_24	UniRef90_A0A417EL78	186.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-1310908_24	1280698.AUJS01000007_gene1055	73.6	0.00000000000000308	N/A	N/A
Pfam	UHGV-1310908_24	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-1310908_24	PF13754	N/A	N/A	N/A	N/A
KOfam	UHGV-1310908_25	K13276	73.9	1.2e-21	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-1310908_25	phrog_11157	282.2	0	N/A	unknown function
UniRef90	UHGV-1310908_25	UniRef90_A0A3R6U6G8	530.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-1310908_25	1256908.HMPREF0373_00674	375.0	0	N/A	N/A
Pfam	UHGV-1310908_25	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1310908_25	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1310908_25	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1310908_25	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_27	phrog_18190	650.7	0	N/A	unknown function
UniRef90	UHGV-1310908_27	UniRef90_A0A3R6M570	1186.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1310908_27	742733.HMPREF9469_01807	323.0	0	N/A	N/A
Pfam	UHGV-1310908_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1310908_27	PF14594,NF033848,COG3501	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_28	phrog_1194	86.0	3.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1310908_28	742733.HMPREF9469_01808	131.0	8.33e-38	N/A	N/A
Pfam	UHGV-1310908_28	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1310908_28	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_29	phrog_1535	379.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1310908_29	UniRef90_A0A174WQ97	598.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-1310908_29	742740.HMPREF9474_03514	559.0	0	tape measure	N/A
COG	UHGV-1310908_29	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1310908_29	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_30	phrog_8355	106.9	6.1e-32	N/A	unknown function
UniRef90	UHGV-1310908_30	UniRef90_UPI0011579C35	154.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1310908_30	742740.HMPREF9474_03513	155.0	0	N/A	N/A
Pfam	UHGV-1310908_30	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1310908_30	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_31	phrog_8300	92.2	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1310908_31	742740.HMPREF9474_03512	108.0	1.54e-29	N/A	N/A
structural_annotation	UHGV-1310908_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_32	phrog_820	137.6	5.60001e-41	major tail protein	tail
eggNOG-mapper	UHGV-1310908_32	742740.HMPREF9474_03511	259.0	0	domain, Protein	N/A
COG	UHGV-1310908_32	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1310908_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1310908_33	phrog_2595	82.3	5.8e-24	head-tail connector protein	connector
UniRef90	UHGV-1310908_33	UniRef90_UPI001D068DAC	177.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1310908_33	742740.HMPREF9474_03510	176.0	0	N/A	N/A
Pfam	UHGV-1310908_33	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1310908_33	PF12691,COG5003	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1310908	Yes	20,422	46	51	1