vOTU vOTU-130616

vOTU: vOTU-130616

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-130616
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01130 → vGENUS-10272 → vOTU-130616
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027373
Biosample ID	SAMEA4766014
Genome length (bp)	25,770 bps
CheckV completeness	64.51% (Medium-quality)
CDS count	32
CDS density	93.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	115	Host agreement	97.39
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0027373_2	phrog_6616	301.6	0	tail protein	tail
UniRef90	UHGV-0027373_2	UniRef90_A0A3D3U8S7	151.0	5.08e-35	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027373_2	476272.RUMHYD_01992	152.0	1.12e-35	N/A	N/A
PHROG	UHGV-0027373_3	phrog_1194	70.2	2.4e-20	N/A	unknown function
structural_annotation	UHGV-0027373_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_4	phrog_1535	145.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0027373_4	UniRef90_A0A1I2KTM2	103.0	5.64e-19	Phage-related protein	N/A
eggNOG-mapper	UHGV-0027373_4	1232449.BAHV02000010_gene2723	112.0	1.79e-22	domain protein	N/A
COG	UHGV-0027373_4	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_5	phrog_706	138.7	3.59994e-41	N/A	unknown function
UniRef90	UHGV-0027373_5	UniRef90_UPI0011DC8B0C	195.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0027373_5	1304866.K413DRAFT_3045	185.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0027373_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0027373_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_6	phrog_11299	111.5	6.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0027373_6	1298920.KI911353_gene2067	104.0	2.65e-26	N/A	N/A
PHROG	UHGV-0027373_7	phrog_3099	155.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0027373_7	1160721.RBI_II00532	204.0	0	N/A	N/A
structural_annotation	UHGV-0027373_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_8	phrog_3266	69.9	3.1e-20	tail completion	connector
eggNOG-mapper	UHGV-0027373_8	1449050.JNLE01000003_gene3885	106.0	1.88e-27	N/A	N/A
structural_annotation	UHGV-0027373_8	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_9	phrog_556	90.3	1.4e-26	minor head protein	head and packaging
UniRef90	UHGV-0027373_9	UniRef90_A0A1M7NJ72	114.0	5.16e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0027373_9	1304866.K413DRAFT_3041	120.0	4.38e-33	N/A	N/A
Pfam	UHGV-0027373_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0027373_9	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_10	phrog_3366	78.0	6.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0027373_10	1449050.JNLE01000003_gene3887	99.8	1.78e-25	N/A	N/A
Pfam	UHGV-0027373_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0027373_10	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_12	phrog_541	88.4	6.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0027373_12	1449050.JNLE01000003_gene3888	88.6	5.88e-21	N/A	N/A
PHROG	UHGV-0027373_13	phrog_10	188.3	0	major head protein	head and packaging
UniRef90	UHGV-0027373_13	UniRef90_UPI001D090FF5	450.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0027373_13	1235792.C808_05368	436.0	0	Phage capsid family	N/A
Pfam	UHGV-0027373_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0027373_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0027373_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0027373_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_14	phrog_2303	99.6	3.6e-29	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0027373_14	1321782.HMPREF1986_02267	142.0	5.32e-40	N/A	N/A
structural_annotation	UHGV-0027373_14	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0027373_15	K07584	85.8	5.7e-25	N/A	N/A
PHROG	UHGV-0027373_15	phrog_4478	70.4	2e-20	peptidase	other
UniRef90	UHGV-0027373_15	UniRef90_A0A2Z4UEY6	78.6	6.39e-17	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0027373_15	411470.RUMGNA_03236	72.8	0.00000000000000181	Cysteine protease Prp	N/A
Pfam	UHGV-0027373_15	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0027373_15	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027373_15	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_16	phrog_581	90.4	2e-26	minor head protein	head and packaging
eggNOG-mapper	UHGV-0027373_16	1449050.JNLE01000003_gene3892	133.0	1.75e-35	Phage minor capsid protein 2	N/A
Pfam	UHGV-0027373_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0027373_16	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_17	phrog_29609	225.7	0	N/A	unknown function
UniRef90	UHGV-0027373_17	UniRef90_A0A1C5VPR8	574.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-0027373_17	1235792.C808_05335	223.0	0	N/A	N/A
Pfam	UHGV-0027373_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0027373_17	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
PHROG	UHGV-0027373_18	phrog_533	392.0	0	portal protein	head and packaging
UniRef90	UHGV-0027373_18	UniRef90_UPI00156E473F	572.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0027373_18	411461.DORFOR_00749	493.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0027373_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0027373_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0027373_19	K06909	225.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0027373_19	phrog_2	117.8	1.4e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0027373_19	UniRef90_UPI001F24FC3E	624.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0027373_19	1235799.C818_04217	597.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0027373_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0027373_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0027373_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027373_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0027373_20	K07474	137.6	1.3e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0027373_20	phrog_2606	298.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0027373_20	UniRef90_A0A6B4XMY8	288.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0027373_20	1415774.U728_838	288.0	0	terminase, small subunit	N/A
Pfam	UHGV-0027373_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0027373_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0027373_20	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_21	phrog_36	47.3	0.0000000000004	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027373_21	UniRef90_UPI001C8D2455	53.5	0.00000341	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0027373_21	411490.ANACAC_00789	56.6	0.0000000561	N/A	N/A
structural_annotation	UHGV-0027373_21	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_22	phrog_5781	85.5	6e-25	N/A	unknown function
UniRef90	UHGV-0027373_22	UniRef90_A0A3D5LSK2	146.0	1.05097e-43	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0027373_22	357276.EL88_12640	79.7	4.04e-17	N/A	N/A
Pfam	UHGV-0027373_22	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0027373_22	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0027373_22	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_28	phrog_15077	99.2	7.2e-29	N/A	unknown function
UniRef90	UHGV-0027373_28	UniRef90_A0A3A6HZA9	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027373_28	483218.BACPEC_01165	233.0	0	N/A	N/A
structural_annotation	UHGV-0027373_28	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0027373_29	phrog_8470	286.9	0	N/A	unknown function
UniRef90	UHGV-0027373_29	UniRef90_UPI00164C094F	191.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0027373_29	483218.BACPEC_01166	389.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0027373_29	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0027373_29	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027373_30	483218.BACPEC_01167	206.0	0	N/A	N/A
structural_annotation	UHGV-0027373_31	PF19962,NF011863	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027373_32	UniRef90_A0A413YU26	150.0	5.60519e-45	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0027373_32	1121447.JONL01000002_gene2134	58.2	0.0000000016	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0027373_32	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0027373_32	COG0328	N/A	N/A	Ribonuclease HI	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027373	Yes	25,770	38	65	1