vOTU vOTU-130783

vOTU: vOTU-130783

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-130783
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-00350 → vOTU-130783
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0149082
Biosample ID	SAMN05414994
Genome length (bp)	21,498 bps
CheckV completeness	58.94% (Medium-quality)
CDS count	32
CDS density	92.03%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	14	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	43	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0149082_1	663278.Ethha_0497	62.0	0.0000000000455	N/A	N/A
PHROG	UHGV-0149082_4	phrog_581	59.2	4.8e-17	minor head protein	head and packaging
UniRef90	UHGV-0149082_4	UniRef90_A0A1C5NZK4	472.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0149082_4	748224.HMPREF9436_03339	200.0	0	N/A	N/A
Pfam	UHGV-0149082_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0149082_4	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_5	phrog_374	229.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0149082_5	UniRef90_A6BES1	220.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0149082_5	411462.DORLON_00791	220.0	0	N/A	N/A
structural_annotation	UHGV-0149082_5	PF10729,MF_01580,NF007510	N/A	N/A	N/A	N/A
UniRef90	UHGV-0149082_7	UniRef90_A0A3A9HXZ9	87.4	1.26e-21	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0149082_7	1235800.C819_00492	77.4	2.01e-18	N/A	N/A
structural_annotation	UHGV-0149082_7	PF01402,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_8	phrog_581	238.7	0	minor head protein	head and packaging
UniRef90	UHGV-0149082_8	UniRef90_UPI001966DE3B	276.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0149082_8	748224.HMPREF9436_03339	439.0	0	N/A	N/A
Pfam	UHGV-0149082_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0149082_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0149082_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_9	phrog_533	255.2	0	portal protein	head and packaging
UniRef90	UHGV-0149082_9	UniRef90_UPI00110638F1	373.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0149082_9	718252.FP2_06700	682.0	0	N/A	N/A
structural_annotation	UHGV-0149082_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_10	K06909	89.3	5.8e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0149082_10	phrog_2	120.6	2.5e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0149082_10	UniRef90_A0A844EGH8	864.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0149082_10	1449050.JNLE01000003_gene3895	411.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0149082_10	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0149082_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0149082_10	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_11	phrog_2412	91.1	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0149082_11	742738.HMPREF9460_02504	114.0	5.74e-31	N/A	N/A
PHROG	UHGV-0149082_12	phrog_36	51.5	0.000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0149082_12	UniRef90_A0A3E2U224	133.0	1.7e-37	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0149082_12	748224.HMPREF9436_01463	267.0	0	N/A	N/A
structural_annotation	UHGV-0149082_12	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_13	K01160	46.4	0.000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0149082_13	phrog_140	92.3	6.2e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0149082_13	UniRef90_UPI00122CFAB3	249.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0149082_13	478749.BRYFOR_07588	144.0	1.11964e-42	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0149082_13	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0149082_13	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0149082_13	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_14	K07505	384.9	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0149082_14	phrog_2597	1108.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0149082_14	UniRef90_A0A2A6Z731	1376.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0149082_14	742738.HMPREF9460_01357	867.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0149082_14	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0149082_14	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0149082_14	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0149082_14	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_15	K17677	346.4	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0149082_15	phrog_16	277.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0149082_15	UniRef90_A0A3A6K1C0	986.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0149082_15	610130.Closa_1369	759.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0149082_15	mREase_IV_00005	140.0	2.09999e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0149082_15	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0149082_15	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0149082_15	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0149082_15	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_16	phrog_2698	195.5	0	N/A	unknown function
UniRef90	UHGV-0149082_16	UniRef90_A0A291T9B6	328.0	0	N/A	N/A
eggNOG-mapper	UHGV-0149082_16	394503.Ccel_3308	120.0	1.19e-32	N/A	N/A
structural_annotation	UHGV-0149082_16	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_17	phrog_124	228.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0149082_17	UniRef90_UPI00122C2B12	587.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0149082_17	645991.Sgly_0321	350.0	0	AAA domain	N/A
Pfam	UHGV-0149082_17	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0149082_17	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_18	K03546	57.7	1.5e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0149082_18	phrog_1499	465.5	0	N/A	unknown function
UniRef90	UHGV-0149082_18	UniRef90_A0A3A6KBP8	813.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0149082_18	1235798.C817_04766	489.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0149082_18	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0149082_18	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0149082_18	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
UniRef90	UHGV-0149082_19	UniRef90_UPI00196846D9	196.0	0	cell envelope integrity protein TolA	N/A
eggNOG-mapper	UHGV-0149082_19	665956.HMPREF1032_03597	187.0	0	DNA binding	N/A
COG	UHGV-0149082_19	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
UniRef90	UHGV-0149082_20	UniRef90_UPI001D0E65C2	124.0	2.55e-34	N/A	N/A
structural_annotation	UHGV-0149082_20	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_24	phrog_32852	96.2	1.7e-28	N/A	unknown function
PHROG	UHGV-0149082_25	phrog_6058	46.5	0.00000000000035	N/A	unknown function
UniRef90	UHGV-0149082_25	UniRef90_E2ZIF6	277.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0149082_25	748224.HMPREF9436_01450	277.0	0	N/A	N/A
Pfam	UHGV-0149082_25	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0149082_25	PF01381,PF12728,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_26	phrog_373	121.6	7.4e-36	anti-repressor	transcription regulation
UniRef90	UHGV-0149082_26	UniRef90_E2ZIF5	433.0	0	Phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-0149082_26	748224.HMPREF9436_01449	433.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0149082_26	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0149082_26	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0149082_26	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0149082_26	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_27	phrog_3292	67.2	2.9e-19	N/A	unknown function
UniRef90	UHGV-0149082_27	UniRef90_A0A1G9YYC5	99.8	3.32e-26	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0149082_27	1121342.AUCO01000012_gene1704	84.0	1.02e-20	KTSC domain	N/A
Pfam	UHGV-0149082_27	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0149082_27	COG0433	N/A	N/A	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	N/A
structural_annotation	UHGV-0149082_27	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-0149082_28	phrog_5765	41.3	0.000000000015	N/A	unknown function
UniRef90	UHGV-0149082_28	UniRef90_UPI001D0EF465	75.9	6.36e-17	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0149082_28	748727.CLJU_c31430	53.5	0.00000000525	N/A	N/A
NCBIFam	UHGV-0149082_28	NF033495.1	N/A	N/A	BC1881 family protein	N/A
structural_annotation	UHGV-0149082_30	PF13601,MF_01819,TIGR03433,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-0149082_32	K18830	65.7	8.6e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0149082_32	phrog_8	52.5	0.0000000000000064	transcriptional regulator	transcription regulation
UniRef90	UHGV-0149082_32	UniRef90_E2ZIF0	243.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0149082_32	748224.HMPREF9436_01444	243.0	0	N/A	N/A
PADLOC	UHGV-0149082_32	retron_type_VI_hth_cluster2_1	47.8	0.00000000000021	N/A	Retron
Pfam	UHGV-0149082_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0149082_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0149082_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0149082	Yes	21,498	59	59	1