vOTU vOTU-130983

vOTU: vOTU-130983

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-130983
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola
Taxonomy (UHGV)	vFAM-00163 → vSUBFAM-05202 → vOTU-130983
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0210658
Biosample ID	SAMN10080927
Genome length (bp)	31,450 bps
CheckV completeness	69.30% (Medium-quality)
CDS count	42
CDS density	91.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola	Total connections	173	Host agreement	99.42

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0210658_1	phrog_112	51.2	0.000000000000025	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210658_1	UniRef90_A0A349U333	68.9	0.0000000000000436	N/A	N/A
eggNOG-mapper	UHGV-0210658_1	1384066.JAGT01000001_gene964	85.5	2.87e-20	N/A	N/A
Pfam	UHGV-0210658_1	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
KOfam	UHGV-0210658_2	K02334	885.5	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0210658_2	phrog_17	390.5	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210658_2	UniRef90_A0A348Z938	877.0	0	POLAc domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_2	696281.Desru_1077	766.0	0	DNA polymerase	N/A
Pfam	UHGV-0210658_2	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0210658_2	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0210658_2	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_3	phrog_256	1042.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210658_3	UniRef90_UPI001D06E26F	819.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0210658_3	1134413.ANNK01000054_gene2222	749.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0210658_3	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0210658_3	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0210658_3	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_4	phrog_93	66.3	4.3e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210658_4	UniRef90_B0MB26	103.0	1.14e-26	VRR-NUC domain protein	N/A
eggNOG-mapper	UHGV-0210658_4	411490.ANACAC_00752	103.0	1.91e-27	VRR-NUC domain protein	N/A
structural_annotation	UHGV-0210658_4	PF01974,MF_01490,NF002584	N/A	N/A	N/A	N/A
KOfam	UHGV-0210658_5	K14440	84.2	1.9e-37	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0210658_5	phrog_62	403.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210658_5	UniRef90_A0A412L7W0	708.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-0210658_5	97138.C820_00220	622.0	0	snf2 family	N/A
PADLOC	UHGV-0210658_5	DpdE_00010	77.7	3.8e-23	DpdE	DPD
Pfam	UHGV-0210658_5	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0210658_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0210658_5	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0210658_5	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_7	phrog_36	76.4	4.2e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210658_7	UniRef90_A0A174B4K2	108.0	1.94e-27	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0210658_7	1235799.C818_04213	117.0	1.49e-31	sigma factor activity	N/A
COG	UHGV-0210658_7	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0210658_7	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0210658_8	K07474	109.1	8.1e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0210658_8	phrog_51	127.7	7e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0210658_8	UniRef90_A0A2A5T8S2	167.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0210658_8	1158614.I592_02274	144.0	2.87967e-42	Terminase small subunit	N/A
Pfam	UHGV-0210658_8	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0210658_8	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0210658_8	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0210658_9	K06909	404.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0210658_9	phrog_3717	175.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210658_9	UniRef90_A0A396NWZ4	833.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0210658_9	536233.CLO_0881	499.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0210658_9	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0210658_9	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0210658_9	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0210658_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0210658_9	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_10	phrog_533	355.0	0	portal protein	head and packaging
UniRef90	UHGV-0210658_10	UniRef90_R5ADJ4	919.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0210658_10	411490.ANACAC_00782	422.0	0	N/A	N/A
Pfam	UHGV-0210658_10	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210658_10	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_11	phrog_581	344.6	0	minor head protein	head and packaging
UniRef90	UHGV-0210658_11	UniRef90_R5AIZ3	693.0	0	Minor capsid 2 protein	N/A
eggNOG-mapper	UHGV-0210658_11	645991.Sgly_0338	450.0	0	N/A	N/A
Pfam	UHGV-0210658_11	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0210658_11	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0210658_11	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210658_11	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_12	phrog_1865	66.8	2.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0210658_12	1582156.A0A0A8WJ56_9CAUD	54.7	0.00000000305	N/A	N/A
structural_annotation	UHGV-0210658_12	PF07073,MF_00436,NF008636,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_13	phrog_15041	45.4	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0210658_13	478749.BRYFOR_07608	48.9	0.00000114	N/A	N/A
Pfam	UHGV-0210658_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0210658_15	phrog_422	250.0	0	major head protein	head and packaging
UniRef90	UHGV-0210658_15	UniRef90_W0U896	419.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210658_15	1160721.RBI_II00538	419.0	0	N/A	N/A
structural_annotation	UHGV-0210658_15	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_17	phrog_541	102.3	3.4e-30	head-tail adaptor	connector
UniRef90	UHGV-0210658_17	UniRef90_C4IFE6	72.8	0.0000000000000493	Putative gp8	N/A
eggNOG-mapper	UHGV-0210658_17	1120998.AUFC01000030_gene2237	105.0	8.97e-28	N/A	N/A
PHROG	UHGV-0210658_18	phrog_3366	55.4	6.5e-16	N/A	unknown function
Pfam	UHGV-0210658_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0210658_18	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_19	phrog_556	64.1	2.2e-18	minor head protein	head and packaging
UniRef90	UHGV-0210658_19	UniRef90_UPI000F63A4E5	124.0	3.48e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-0210658_19	903814.ELI_3205	60.5	0.000000000265	Minor capsid protein	N/A
Pfam	UHGV-0210658_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0210658_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_20	phrog_3266	129.0	2e-38	tail completion	connector
UniRef90	UHGV-0210658_20	UniRef90_A0A353IZQ8	179.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0210658_20	1280692.AUJL01000004_gene841	125.0	7.43e-35	N/A	N/A
structural_annotation	UHGV-0210658_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_21	phrog_3099	210.7	0	N/A	unknown function
UniRef90	UHGV-0210658_21	UniRef90_A0A0A8WE72	191.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_21	903814.ELI_3202	188.0	0	N/A	N/A
structural_annotation	UHGV-0210658_21	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210658_22	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_23	phrog_706	151.3	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0210658_23	UniRef90_UPI001D122605	156.0	9.80909e-45	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0210658_23	1151292.QEW_4528	134.0	1.41e-36	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0210658_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0210658_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_24	phrog_6900	274.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0210658_24	536233.CLO_1577	336.0	0	tape measure	N/A
COG	UHGV-0210658_24	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0210658_25	phrog_33	105.4	8.7e-31	distal tail protein Dit	tail
UniRef90	UHGV-0210658_25	UniRef90_R5ADI0	444.0	0	Putative phage tail component	N/A
eggNOG-mapper	UHGV-0210658_25	1262449.CP6013_2095	174.0	0	tail component	N/A
NCBIFam	UHGV-0210658_25	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0210658_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0210658_25	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_26	phrog_863	78.2	1.8e-22	tail fiber assembly	tail
UniRef90	UHGV-0210658_26	UniRef90_R5AIX9	181.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_26	1499683.CCFF01000005_gene81	65.1	0.0000000189	N/A	N/A
Pfam	UHGV-0210658_26	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0210658_26	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-0210658_26	PF10651,PF21722,NF032891,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_28	phrog_2310	64.2	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0210658_28	1391647.AVSV01000022_gene2576	58.2	0.000000000058	N/A	N/A
PHROG	UHGV-0210658_29	phrog_1067	277.1	0	minor head protein	head and packaging
UniRef90	UHGV-0210658_29	UniRef90_A0A396NSB6	710.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_29	1443125.Z962_07985	221.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0210658_29	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0210658_29	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0210658_29	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0210658_29	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_30	phrog_937	52.0	0.000000000000011	hemolysin	other
eggNOG-mapper	UHGV-0210658_30	1519439.JPJG01000023_gene533	67.8	0.000000000000154	N/A	N/A
PHROG	UHGV-0210658_32	phrog_13256	78.1	5.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0210658_32	1226322.HMPREF1545_00166	75.1	5.99e-17	N/A	N/A
KOfam	UHGV-0210658_33	K02395	83.6	3.9e-24	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0210658_33	phrog_3513	158.2	0	endolysin	lysis
UniRef90	UHGV-0210658_33	UniRef90_A0A396P8X6	396.0	0	LYZ2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_33	1341157.RF007C_12385	167.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-0210658_33	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0210658_33	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0210658_34	phrog_13890	47.6	0.00000000000023	N/A	unknown function
eggNOG-mapper	UHGV-0210658_34	1232453.BAIF02000002_gene1276	82.8	2.08e-20	N/A	N/A
structural_annotation	UHGV-0210658_34	PF10723,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_36	phrog_4608	163.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-0210658_36	UniRef90_A0A350TXK3	389.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_36	1499683.CCFF01000014_gene3566	136.0	1.14e-36	Phage regulatory protein	N/A
Pfam	UHGV-0210658_36	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0210658_36	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0210658_36	PF10543,PF15188,MF_01506,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0210658_38	K14059	257.9	0	int; integrase	N/A
PHROG	UHGV-0210658_38	phrog_1	227.9	0	integrase	integration and excision
UniRef90	UHGV-0210658_38	UniRef90_A0A352UQ74	817.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0210658_38	1120998.AUFC01000030_gene2201	438.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0210658_38	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0210658_38	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0210658_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0210658_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0210658_38	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_39	phrog_17982	85.7	3.3e-25	N/A	unknown function
UniRef90	UHGV-0210658_39	UniRef90_A0A0X1U7N9	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210658_39	742723.HMPREF9477_00941	85.9	8.83e-16	dextransucrase activity	N/A
Pfam	UHGV-0210658_39	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0210658_39	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
structural_annotation	UHGV-0210658_39	PF14020,PF02368,COG1721	N/A	N/A	N/A	N/A
PHROG	UHGV-0210658_40	phrog_7115	132.0	2.3e-39	N/A	unknown function
UniRef90	UHGV-0210658_40	UniRef90_A0A173UN76	192.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0210658_40	476272.RUMHYD_02184	183.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0210658_40	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0210658_40	PF08000,MF_00437	N/A	N/A	N/A	N/A
KOfam	UHGV-0210658_41	K01356	136.8	2.4e-40	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0210658_41	phrog_4	112.2	5.7e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-0210658_41	UniRef90_A0A350TVK1	298.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0210658_41	1033744.CAEL01000029_gene1309	154.0	1.68156e-44	Peptidase S24-like	N/A
Pfam	UHGV-0210658_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0210658_41	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0210658_41	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0210658_41	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210658	Yes	31,450	49	69	1