vOTU vOTU-131379

vOTU: vOTU-131379

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-131379
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00022 → vGENUS-00037 → vOTU-131379
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1537427
Biosample ID	SAMN06110026
Genome length (bp)	47,219 bps
CheckV completeness	58.68% (Medium-quality)
CDS count	63
CDS density	86.72%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	19	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	9	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1537427_1	476272.RUMHYD_01907	78.6	0.0000000000000017	N/A	N/A
structural_annotation	UHGV-1537427_1	PF16677	N/A	N/A	N/A	N/A
Pfam	UHGV-1537427_2	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
UniRef90	UHGV-1537427_3	UniRef90_A0A373NQ99	147.0	7.00649e-45	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1537427_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1537427_3	PF20075,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1537427_4	K14060	104.2	1.6e-30	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1537427_4	phrog_125	170.3	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537427_4	UniRef90_A0A373NRE9	350.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1537427_4	476272.RUMHYD_01910	258.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1537427_4	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1537427_4	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
COG	UHGV-1537427_4	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1537427_4	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_5	476272.RUMHYD_01911	130.0	8.92e-37	N/A	N/A
structural_annotation	UHGV-1537427_5	PF08962	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_10	phrog_850	388.8	0	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537427_10	UniRef90_A0A3E5EPH1	893.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537427_10	476272.RUMHYD_01913	557.0	0	N/A	N/A
Pfam	UHGV-1537427_10	PF11443	N/A	N/A	N/A	DUF2828
COG	UHGV-1537427_10	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
structural_annotation	UHGV-1537427_10	PF11443,MF_01340,COG2304	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_18	phrog_13999	45.5	0.00000000000088	N/A	unknown function
KOfam	UHGV-1537427_19	K14415	338.0	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-1537427_19	phrog_1075	438.6	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1537427_19	UniRef90_UPI001898CD6A	615.0	0	RtcB family protein	N/A
eggNOG-mapper	UHGV-1537427_19	397290.C810_01387	556.0	0	tRNA-splicing ligase RtcB	N/A
Pfam	UHGV-1537427_19	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-1537427_19	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-1537427_19	PF01139,MF_03144,NF007153,COG1690	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_20	phrog_38	162.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1537427_20	UniRef90_A0A318EQM2	509.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1537427_20	1123263.AUKY01000015_gene1608	339.0	0	chromosome segregation	N/A
COG	UHGV-1537427_20	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537427_20	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_21	phrog_36	68.5	1.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1537427_21	UniRef90_A0A373NRA4	257.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537427_21	97138.C820_00221	72.4	0.0000000000000299	sigma factor activity	N/A
Pfam	UHGV-1537427_21	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1537427_21	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1537427_21	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_22	phrog_64	181.7	0	portal protein	head and packaging
UniRef90	UHGV-1537427_22	UniRef90_A0A373NRD8	989.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1537427_22	1298920.KI911353_gene2663	570.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1537427_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1537427_22	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_23	1298920.KI911353_gene2662	55.8	0.000000823	N/A	N/A
PHROG	UHGV-1537427_24	phrog_909	74.5	1.2e-21	major head protein	head and packaging
UniRef90	UHGV-1537427_24	UniRef90_K1TUL5	62.8	0.000000000252	N/A	N/A
eggNOG-mapper	UHGV-1537427_24	1497679.EP56_02915	69.3	0.0000000000000825	N/A	N/A
structural_annotation	UHGV-1537427_24	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_25	phrog_29	146.5	1.79366e-43	major head protein	head and packaging
UniRef90	UHGV-1537427_25	UniRef90_A0A0E2H7J5	391.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1537427_25	1232443.BAIA02000078_gene29	290.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1537427_25	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1537427_25	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_26	476272.RUMHYD_01948	107.0	5.07e-29	N/A	N/A
PHROG	UHGV-1537427_27	phrog_937	55.5	4.2e-16	hemolysin	other
UniRef90	UHGV-1537427_28	UniRef90_A0A373NQ83	151.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1537427_28	476272.RUMHYD_01951	63.2	0.00000000000373	N/A	N/A
Pfam	UHGV-1537427_28	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1537427_28	PF04545,MF_00674,NF001067,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_29	phrog_21718	67.9	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1537427_29	476272.RUMHYD_01952	111.0	8.94e-29	N/A	N/A
PHROG	UHGV-1537427_31	phrog_16490	222.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1537427_31	658655.HMPREF0988_00917	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537427_32	1408437.JNJN01000043_gene802	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-1537427_34	397290.C810_01336	72.0	0.0000000000000121	N/A	N/A
PHROG	UHGV-1537427_35	phrog_19695	60.8	3.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1537427_35	1232452.BAIB02000007_gene1611	92.8	3.75e-23	N/A	N/A
structural_annotation	UHGV-1537427_35	PF19714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_36	1232452.BAIB02000007_gene1610	127.0	5.66e-31	N/A	N/A
structural_annotation	UHGV-1537427_38	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_39	476272.RUMHYD_01963	93.6	1.22e-21	N/A	N/A
AcrCatalog	UHGV-1537427_39	cluster_24841	72.8	3.58e-18	NA	N/A
structural_annotation	UHGV-1537427_40	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_41	phrog_443	51.5	0.000000000000025	holin	lysis
UniRef90	UHGV-1537427_41	UniRef90_A0A1I5VN65	93.2	1.49e-23	Phage r1t holin	N/A
eggNOG-mapper	UHGV-1537427_41	397287.C807_03698	87.8	3.79e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1537427_41	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1537427_41	PF16945	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_42	476272.RUMHYD_01968	130.0	2.29e-36	N/A	N/A
structural_annotation	UHGV-1537427_42	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_45	phrog_28918	552.6	0	N/A	unknown function
UniRef90	UHGV-1537427_45	UniRef90_A0A1C5P271	402.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-1537427_45	97139.C824_02812	552.0	0	phage tail tape measure protein	N/A
COG	UHGV-1537427_45	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1537427_46	phrog_2657	97.4	3e-29	transcriptional regulator	transcription regulation
UniRef90	UHGV-1537427_46	UniRef90_UPI0009305F59	246.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1537427_46	180332.JTGN01000007_gene3610	182.0	0	PFAM Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1537427_46	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-1537427_46	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1537427_46	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_47	658088.HMPREF0987_01134	89.7	4.35e-22	N/A	N/A
structural_annotation	UHGV-1537427_47	PF21076,NF002066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_48	1397699.JNIS01000001_gene2447	91.7	3.74e-18	Conserved phage C-terminus (Phg_2220_C)	N/A
structural_annotation	UHGV-1537427_48	PF05584,MF_01909,NF033788,COG1675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_49	1304866.K413DRAFT_3400	86.3	1.23e-19	N/A	N/A
PHROG	UHGV-1537427_50	phrog_21101	45.9	0.00000000000073	N/A	unknown function
UniRef90	UHGV-1537427_50	UniRef90_A0A412EKK3	137.0	1.73e-40	N/A	N/A
eggNOG-mapper	UHGV-1537427_50	877415.JNJQ01000017_gene246	109.0	8.48e-27	Prolyl oligopeptidase family	N/A
Pfam	UHGV-1537427_50	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1537427_50	COG4099	N/A	N/A	Predicted peptidase	N/A
structural_annotation	UHGV-1537427_50	PF07866,COG4728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1537427_51	1235793.C809_00537	56.6	0.00000000162	N/A	N/A
PHROG	UHGV-1537427_52	phrog_215	44.5	1.4e-21	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-1537427_52	397288.C806_03994	72.0	0.0000000000303	domain, Protein	N/A
Pfam	UHGV-1537427_52	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1537427_52	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537427_52	PF02368,PF11906,NF005261	N/A	N/A	N/A	N/A
KOfam	UHGV-1537427_53	K07741	56.5	8.6e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-1537427_53	phrog_373	105.6	5.8e-31	anti-repressor	transcription regulation
UniRef90	UHGV-1537427_53	UniRef90_A0A373NQA0	514.0	0	Toxin Bro	N/A
eggNOG-mapper	UHGV-1537427_53	397290.C810_01343	273.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1537427_53	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1537427_53	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1537427_53	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1537427_55	UniRef90_A0A416L831	98.6	1.32e-25	Toxin-antitoxin system HicB family antitoxin	N/A
structural_annotation	UHGV-1537427_55	PF16777,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_56	phrog_463	236.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-1537427_56	UniRef90_A0A3R6M802	239.0	0	Toxin Bro	N/A
eggNOG-mapper	UHGV-1537427_56	596315.HMPREF0634_0237	190.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-1537427_56	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1537427_56	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1537427_56	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1537427_56	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1537427_57	PF01017,TIGR02890	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_58	phrog_1194	123.3	1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1537427_58	1117108.PAALTS15_13512	72.4	0.00000000000000946	N/A	N/A
structural_annotation	UHGV-1537427_58	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_59	phrog_6616	581.3	0	tail protein	tail
UniRef90	UHGV-1537427_59	UniRef90_R5QUN9	587.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1537427_59	1121866.AUGK01000003_gene1439	305.0	0	Phage minor structural protein	N/A
COG	UHGV-1537427_59	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1537427_59	PF05113,PF13884,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1537427_60	phrog_18444	77.4	1.1e-22	N/A	unknown function
UniRef90	UHGV-1537427_60	UniRef90_UPI00156E9A45	65.5	0.00000000000117	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-1537427_60	545243.BAEV01000153_gene380	46.2	0.00000914	N/A	N/A
UniRef90	UHGV-1537427_61	UniRef90_UPI001C0EBDDC	93.6	5.22e-21	pyocin knob domain-containing protein	N/A
eggNOG-mapper	UHGV-1537427_61	411459.RUMOBE_04220	85.9	1.78e-17	Histidine kinase	N/A
COG	UHGV-1537427_61	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A
structural_annotation	UHGV-1537427_61	PF17065,NF038127	N/A	N/A	N/A	N/A
KOfam	UHGV-1537427_63	K01447	112.1	7e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1537427_63	phrog_3088	163.7	0	amidase	lysis
UniRef90	UHGV-1537427_63	UniRef90_A0A173WJQ4	353.0	0	N-acetylmuramoyl-L-alanine amidase CwlH	N/A
eggNOG-mapper	UHGV-1537427_63	457412.RSAG_02159	252.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1537427_63	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1537427_63	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1537427_63	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1537427_63	PF01510,PF08230,NF008758,COG5632	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1537427	Yes	47,219	38	59	1
UHGV-0162929	No	49,071	38	61	1