vOTU vOTU-131703

vOTU: vOTU-131703

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-131703
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00393 → vOTU-131703
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1383695
Biosample ID	N/A
Genome length (bp)	22,286 bps
CheckV completeness	53.35% (Medium-quality)
CDS count	38
CDS density	87.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	35	Host agreement	91.43
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1383695_1	phrog_1357	122.3	3.8e-36	major head protein	head and packaging
UniRef90	UHGV-1383695_1	UniRef90_A0A2V2CFL5	234.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1383695_1	1410650.JHWL01000003_gene2830	167.0	0	N/A	N/A
NCBIFam	UHGV-1383695_1	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
PHROG	UHGV-1383695_2	phrog_13908	198.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1383695_2	1410650.JHWL01000003_gene2831	125.0	4.82e-31	N/A	N/A
PHROG	UHGV-1383695_3	phrog_156	77.0	2e-22	portal protein	head and packaging
eggNOG-mapper	UHGV-1383695_3	1410650.JHWL01000003_gene2833	141.0	2.99e-36	N/A	N/A
PHROG	UHGV-1383695_5	phrog_511	212.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1383695_5	1410650.JHWL01000003_gene2827	327.0	0	N/A	N/A
structural_annotation	UHGV-1383695_5	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-1383695_6	K06909	134.6	1e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1383695_6	phrog_2	123.4	3.2e-36	terminase large subunit	head and packaging
UniRef90	UHGV-1383695_6	UniRef90_A0A810Q5R0	611.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1383695_6	1410650.JHWL01000003_gene2834	575.0	0	N/A	N/A
Pfam	UHGV-1383695_6	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1383695_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1383695_6	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1383695_7	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1383695_7	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1383695_8	phrog_3584	118.2	6.8e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1383695_8	537013.CLOSTMETH_02141	80.1	0.00000000000000111	N/A	N/A
structural_annotation	UHGV-1383695_8	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-1383695_9	phrog_21498	304.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1383695_9	78346.BRUM_0376	262.0	0	DNA binding	N/A
COG	UHGV-1383695_9	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1383695_9	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-1383695_13	phrog_190	106.6	2.4e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1383695_13	UniRef90_UPI0006C2AC63	124.0	2.84e-33	N/A	N/A
eggNOG-mapper	UHGV-1383695_13	693746.OBV_25250	115.0	7.49e-31	N/A	N/A
Pfam	UHGV-1383695_13	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1383695_13	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1383695_17	phrog_38832	71.9	9.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1383695_17	665956.HMPREF1032_00143	88.6	5.99e-20	N/A	N/A
KOfam	UHGV-1383695_20	K00390	101.9	7.4e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1383695_20	phrog_424	122.6	2.1e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1383695_20	UniRef90_UPI001D087498	428.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1383695_20	1408437.JNJN01000032_gene2312	330.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1383695_20	BrxP_00001	65.1	1.4e-19	BrxP	BREX
Pfam	UHGV-1383695_20	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1383695_20	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1383695_20	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1383695_21	K00558	160.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1383695_21	phrog_363	240.0	0	DNA methyltransferase	other
UniRef90	UHGV-1383695_21	UniRef90_G4KRB8	335.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1383695_21	693746.OBV_01900	335.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1383695_21	DruM2_00001	118.9	8.2e-35	DNA cytosine methylase	Druantia
Pfam	UHGV-1383695_21	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1383695_21	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1383695_21	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1383695_21	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1383695_22	K00558	44.8	0.0000000000011	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1383695_22	phrog_757	133.1	1.5e-39	DNA methyltransferase	other
UniRef90	UHGV-1383695_22	UniRef90_A0A1C5WFL3	396.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1383695_22	622312.ROSEINA2194_01264	378.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-1383695_22	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1383695_22	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1383695_22	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383695_25	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1383695_27	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1383695_32	K18830	50.5	0.000000000000047	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1383695_32	phrog_8	43.8	0.0000000000058	transcriptional regulator	transcription regulation
UniRef90	UHGV-1383695_32	UniRef90_A0A1C5N467	117.0	2.09e-31	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1383695_32	411471.SUBVAR_05818	102.0	1.97e-26	sequence-specific DNA binding	N/A
Pfam	UHGV-1383695_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1383695_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383695_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
COG	UHGV-1383695_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1383695_34	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1383695_35	K14059	132.7	5.6e-39	int; integrase	N/A
PHROG	UHGV-1383695_35	phrog_1	145.0	6.50202e-43	integrase	integration and excision
UniRef90	UHGV-1383695_35	UniRef90_A0A2Z4QB94	322.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1383695_35	641112.ACOK01000111_gene1860	112.0	2.23e-25	Phage integrase family	N/A
Pfam	UHGV-1383695_35	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1383695_35	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1383695_35	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1383695_36	UniRef90_A0A7M1RTM1	76.6	0.0000000000000278	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1383695_36	1378168.N510_03079	68.9	0.00000000000917	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1383695	Yes	22,286	57	53	1