vOTU vOTU-132037

vOTU: vOTU-132037

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-132037
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-00709 → vGENUS-00656 → vOTU-132037
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900554225
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0179097
Biosample ID	N/A
Genome length (bp)	40,570 bps
CheckV completeness	70.66% (Medium-quality)
CDS count	42
CDS density	95.27%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900554225	Total connections	10	Host agreement	70
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.66)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0179097_1	phrog_474	72.7	9.2e-21	phosphofructokinase	other
UniRef90	UHGV-0179097_1	UniRef90_A0A3E2XXK5	75.1	0.00000000000000129	N/A	N/A
eggNOG-mapper	UHGV-0179097_1	1095750.HMPREF9970_1026	67.0	0.000000000000287	N/A	N/A
Pfam	UHGV-0179097_1	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0179097_1	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_2	phrog_4632	51.8	5.6e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179097_2	UniRef90_A0A7X8IB41	114.0	2.19e-30	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0179097_2	556263.FSEG_00477	70.1	0.0000000000000912	N/A	N/A
structural_annotation	UHGV-0179097_2	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179097_3	UniRef90_UPI00156F0E9C	63.9	0.0000000000574	N/A	N/A
eggNOG-mapper	UHGV-0179097_3	1415774.U728_1667	58.2	0.0000000016	N/A	N/A
structural_annotation	UHGV-0179097_3	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0179097_4	K03111	138.2	9.49996e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0179097_4	phrog_44	136.0	9.60002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179097_4	UniRef90_R5QD10	149.0	4.17587e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0179097_4	445972.ANACOL_04434	132.0	6.15e-37	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0179097_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0179097_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0179097_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0179097_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0179097_4	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_9	phrog_14770	100.0	0	N/A	unknown function
UniRef90	UHGV-0179097_9	UniRef90_UPI001BB47D0E	1534.0	0	strawberry notch family protein	N/A
eggNOG-mapper	UHGV-0179097_9	1123288.SOV_4c02780	1147.0	0	protein secretion by the type IV secretion system	N/A
Pfam	UHGV-0179097_9	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0179097_9	PF13872	N/A	N/A	P-loop containing NTP hydrolase pore-1	AAA_34
Pfam	UHGV-0179097_9	PF13871	N/A	N/A	C-terminal domain on Strawberry notch homologue	Helicase_C_4
Pfam	UHGV-0179097_9	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0179097_9	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
Pfam	UHGV-0179097_11	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-0179097_13	phrog_2172	135.5	3e-40	N/A	unknown function
UniRef90	UHGV-0179097_13	UniRef90_W1I4H7	172.0	0	Uncultured bacterium plasmid pRGI00071	N/A
eggNOG-mapper	UHGV-0179097_13	1408311.JNJM01000024_gene619	148.0	1.71e-40	Initiator Replication protein	N/A
Pfam	UHGV-0179097_13	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0179097_13	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0179097_13	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0179097_13	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
KOfam	UHGV-0179097_14	K14060	119.4	3.7e-35	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0179097_14	phrog_125	163.1	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179097_14	UniRef90_A0A7X7EJJ7	171.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0179097_14	877420.ATVW01000008_gene521	171.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0179097_14	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0179097_14	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0179097_14	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179097_16	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_17	phrog_20016	194.3	0	N/A	unknown function
UniRef90	UHGV-0179097_17	UniRef90_A0A2Z4QB67	170.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0179097_17	1226322.HMPREF1545_00077	163.0	0	N/A	N/A
structural_annotation	UHGV-0179097_17	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_18	phrog_16490	123.5	2.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-0179097_18	658655.HMPREF0988_00917	79.3	0.0000000000000109	N/A	N/A
PHROG	UHGV-0179097_19	phrog_22984	73.0	3.8e-21	N/A	unknown function
PHROG	UHGV-0179097_20	phrog_21718	121.5	5.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-0179097_20	397290.C810_05210	94.0	3.49e-22	N/A	N/A
PHROG	UHGV-0179097_21	phrog_3754	107.0	1.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0179097_21	476272.RUMHYD_01764	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179097_22	693746.OBV_19020	63.5	0.0000000000034	N/A	N/A
KOfam	UHGV-0179097_24	K19304	115.8	5.3e-34	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0179097_24	phrog_7767	107.2	1e-31	metallo-endopeptidase	other
UniRef90	UHGV-0179097_24	UniRef90_A0A353WR18	82.4	0.000000000000083	Metalloendopeptidase	N/A
eggNOG-mapper	UHGV-0179097_24	1449126.JQKL01000043_gene1877	105.0	8.86e-24	Peptidase family M23	N/A
Pfam	UHGV-0179097_24	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0179097_24	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0179097_24	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_25	phrog_4105	57.6	2.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0179097_25	33035.JPJF01000043_gene996	70.9	0.0000000000000266	N/A	N/A
PHROG	UHGV-0179097_27	phrog_19111	41.0	3.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0179097_27	1298920.KI911353_gene541	62.0	0.0000000179	ATPase involved in DNA repair	N/A
COG	UHGV-0179097_27	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0179097_28	931626.Awo_c11420	71.2	0.0000000000529	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0179097_28	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0179097_28	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179097_28	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_29	phrog_13589	41.8	0.0000000000065	N/A	unknown function
eggNOG-mapper	UHGV-0179097_29	1298920.KI911353_gene4836	61.2	0.0000000089	ATPase involved in DNA repair	N/A
COG	UHGV-0179097_29	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0179097_30	phrog_3904	45.2	3.5e-16	tail fiber protein	tail
COG	UHGV-0179097_30	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0179097_30	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179097_33	1449126.JQKL01000002_gene1688	84.0	0.0000000000000172	N/A	N/A
structural_annotation	UHGV-0179097_33	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179097_34	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_36	phrog_14242	94.1	1.1e-27	major head protein	head and packaging
UniRef90	UHGV-0179097_36	UniRef90_A0A3D2CI53	324.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0179097_36	935948.KE386495_gene2267	56.6	0.00000677	N/A	N/A
NCBIFam	UHGV-0179097_36	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0179097_36	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_38	phrog_156	109.4	3.3e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0179097_38	588581.Cpap_1526	285.0	0	N/A	N/A
structural_annotation	UHGV-0179097_38	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0179097_41	K06909	291.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0179097_41	phrog_3717	201.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0179097_41	UniRef90_UPI001C30E6F9	437.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0179097_41	696281.Desru_1088	419.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0179097_41	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0179097_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0179097_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0179097_41	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0179097_42	phrog_606	45.8	0.0000000000011	terminase small subunit	head and packaging
UniRef90	UHGV-0179097_42	UniRef90_UPI001D02F64C	82.8	1.88e-17	DNA-packaging protein	N/A
structural_annotation	UHGV-0179097_42	PF16677	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0179097	Yes	40,570	49	71	1
UHGV-0198614	No	39,876	49	69	1