vOTU vOTU-132483

vOTU: vOTU-132483

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-132483
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1474 → UMGS1474 sp900552115
Taxonomy (UHGV)	vFAM-00003 → vOTU-132483
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1474 → UMGS1474 sp900552115
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0103773
Biosample ID	N/A
Genome length (bp)	22,612 bps
CheckV completeness	54.06% (Medium-quality)
CDS count	27
CDS density	91.58%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1474 → UMGS1474 sp900552115	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0103773_1	K01971	217.6	0	ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]	N/A
PHROG	UHGV-0103773_1	phrog_114	112.5	3.9e-33	ATP-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0103773_1	UniRef90_A0A416EFU6	461.0	0	DNA ligase (ATP)	N/A
eggNOG-mapper	UHGV-0103773_1	742740.HMPREF9474_01421	375.0	0	ATP dependent DNA ligase domain	N/A
Pfam	UHGV-0103773_1	PF01068	N/A	N/A	ATP dependent DNA ligase domain	DNA_ligase_A_M
Pfam	UHGV-0103773_1	PF04679	N/A	N/A	ATP dependent DNA ligase C terminal region	DNA_ligase_A_C
COG	UHGV-0103773_1	COG1793	N/A	N/A	ATP-dependent DNA ligase	N/A
structural_annotation	UHGV-0103773_1	PF01068,PF04679,MF_00407,TIGR02779,COG1793	N/A	N/A	N/A	N/A
KOfam	UHGV-0103773_2	K10979	319.7	0	ku; DNA end-binding protein Ku	N/A
PHROG	UHGV-0103773_2	phrog_4873	202.1	0	Ku-like DNA end binding	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0103773_2	UniRef90_A0A416EFT4	450.0	0	Non-homologous end joining protein Ku	N/A
eggNOG-mapper	UHGV-0103773_2	742740.HMPREF9474_01420	367.0	0	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD	N/A
Pfam	UHGV-0103773_2	PF02735	N/A	N/A	Ku70/Ku80 beta-barrel domain	Ku
NCBIFam	UHGV-0103773_2	TIGR02772.1	N/A	N/A	Ku protein	N/A
COG	UHGV-0103773_2	COG1273	N/A	N/A	Non-homologous end joining protein Ku, dsDNA break repair	N/A
HAMAP	UHGV-0103773_2	MF_01875	N/A	N/A	Non-homologous end joining protein Ku [ku]	N/A
structural_annotation	UHGV-0103773_2	PF02735,MF_01875,TIGR02772,COG1273	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0103773_3	445972.ANACOL_02963	127.0	2.11e-37	N/A	N/A
AcrCatalog	UHGV-0103773_3	cluster_2172	103.0	1.13e-32	NA	N/A
KOfam	UHGV-0103773_4	K01447	110.7	1.8e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0103773_4	phrog_3088	255.0	0	amidase	lysis
UniRef90	UHGV-0103773_4	UniRef90_A0A412AXM4	434.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0103773_4	428125.CLOLEP_01782	431.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0103773_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0103773_4	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0103773_4	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_5	phrog_1129	81.8	4.8e-24	holin	lysis
UniRef90	UHGV-0103773_5	UniRef90_UPI001C124A7D	105.0	1.04e-27	phage holin family protein	N/A
eggNOG-mapper	UHGV-0103773_5	1232453.BAIF02000013_gene3227	107.0	4.04e-29	N/A	N/A
Pfam	UHGV-0103773_5	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0103773_5	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_6	phrog_1863	61.8	7.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0103773_6	665956.HMPREF1032_03922	92.8	1.11e-23	N/A	N/A
eggNOG-mapper	UHGV-0103773_7	1203611.KB894547_gene2599	62.4	0.0000000000144	N/A	N/A
PHROG	UHGV-0103773_8	phrog_3639	53.5	0.0000000000000042	minor tail protein	tail
eggNOG-mapper	UHGV-0103773_8	537013.CLOSTMETH_03776	62.0	0.000000363	N/A	N/A
Pfam	UHGV-0103773_8	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0103773_8	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
PHROG	UHGV-0103773_9	phrog_6616	309.1	0	tail protein	tail
UniRef90	UHGV-0103773_9	UniRef90_A0A414EG21	155.0	3.63e-36	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0103773_9	445971.ANASTE_00088	155.0	3.86e-37	N/A	N/A
structural_annotation	UHGV-0103773_9	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_10	phrog_1194	112.4	2.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-0103773_10	1121866.AUGK01000003_gene1438	81.3	4.52e-18	N/A	N/A
Pfam	UHGV-0103773_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0103773_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_11	phrog_1535	169.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0103773_11	665956.HMPREF1032_00686	309.0	0	phage tail tape measure protein	N/A
COG	UHGV-0103773_11	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0103773_12	phrog_2066	53.4	0.000000000000005	N/A	unknown function
PHROG	UHGV-0103773_13	phrog_183	41.5	0.00000000002	tail chaperone protein	tail
UniRef90	UHGV-0103773_13	UniRef90_UPI0005CCB78A	59.3	0.0000000084	N/A	N/A
eggNOG-mapper	UHGV-0103773_13	1123304.AQYA01000037_gene231	64.3	0.0000000000187	N/A	N/A
structural_annotation	UHGV-0103773_13	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_14	phrog_158	60.9	1e-17	major tail protein	tail
UniRef90	UHGV-0103773_14	UniRef90_A0A174ZXR0	156.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0103773_14	1158607.UAU_01767	93.6	3.24e-22	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0103773_14	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0103773_15	UniRef90_UPI0013873EB5	115.0	3.64e-31	N/A	N/A
eggNOG-mapper	UHGV-0103773_15	1280692.AUJL01000025_gene2075	58.9	0.00000000159	N/A	N/A
Pfam	UHGV-0103773_15	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-0103773_15	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_16	phrog_5	101.5	6.6e-30	tail completion or Neck1 protein	connector
UniRef90	UHGV-0103773_16	UniRef90_A0A1M6MXQ2	119.0	1.28e-31	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0103773_16	1280692.AUJL01000025_gene2076	90.9	5.84e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0103773_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0103773_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0103773_16	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0103773_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_18	phrog_132	80.3	1.8e-23	head-tail adaptor	connector
UniRef90	UHGV-0103773_18	UniRef90_A0A175A0L9	124.0	1.18e-34	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0103773_18	1294142.CINTURNW_1692	85.1	4.71e-20	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0103773_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0103773_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0103773_19	UniRef90_A0A372V0W4	57.4	0.000000000725	C2H2-type domain-containing protein	N/A
PHROG	UHGV-0103773_20	phrog_422	237.7	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0103773_20	693746.OBV_18090	466.0	0	N/A	N/A
structural_annotation	UHGV-0103773_20	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_21	phrog_172	128.0	8e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-0103773_21	UniRef90_A0A7X5D6T5	128.0	4.4e-34	N/A	N/A
eggNOG-mapper	UHGV-0103773_21	1235800.C819_00486	130.0	1.17e-34	N/A	N/A
Pfam	UHGV-0103773_21	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0103773_21	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_23	phrog_2841	339.6	0	minor head protein	head and packaging
UniRef90	UHGV-0103773_23	UniRef90_A0A141DZZ2	369.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0103773_23	742733.HMPREF9469_01825	306.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0103773_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0103773_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0103773_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0103773_23	PF04233,TIGR01641,COG2357	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_24	phrog_64	431.7	0	portal protein	head and packaging
UniRef90	UHGV-0103773_24	UniRef90_UPI00122F6315	541.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0103773_24	1504823.CCMM01000008_gene1047	372.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0103773_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0103773_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0103773_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0103773_25	K06909	124.9	8.6e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0103773_25	phrog_10250	201.8	0	N/A	unknown function
UniRef90	UHGV-0103773_25	UniRef90_UPI0002EF417D	470.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0103773_25	476272.RUMHYD_01756	372.0	0	N/A	N/A
Pfam	UHGV-0103773_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0103773_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0103773_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0103773_25	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_26	phrog_309	145.0	1.49939e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0103773_26	UniRef90_A0A8J6P944	167.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0103773_26	693746.OBV_18020	146.0	2.35418e-43	transposase activity	N/A
Pfam	UHGV-0103773_26	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0103773_26	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0103773_26	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0103773_27	phrog_36	68.0	1.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0103773_27	UniRef90_A0A7X7SYD5	57.0	0.000000174	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0103773_27	875454.BAEW01000002_gene486	75.1	0.00000000000000284	N/A	N/A
structural_annotation	UHGV-0103773_27	PF02996	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0103773	Yes	22,612	49	54	1