vOTU vOTU-132686

vOTU: vOTU-132686

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-132686
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00134 → vSUBFAM-00432 → vOTU-132686
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0094920
Biosample ID	N/A
Genome length (bp)	30,258 bps
CheckV completeness	84.49% (Medium-quality)
CDS count	56
CDS density	90.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	302	Host agreement	97.68
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	94	Host agreement	98.94

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0094920_1	phrog_23254	43.1	0.0000000000079	N/A	unknown function
UniRef90	UHGV-0094920_1	UniRef90_UPI000464BCC6	59.3	0.00000000194	N/A	N/A
eggNOG-mapper	UHGV-0094920_1	665950.HMPREF1025_01580	186.0	0	COGs COG4383 Mu-like prophage protein gp29	N/A
Pfam	UHGV-0094920_1	PF06074	N/A	N/A	N/A	DUF935
COG	UHGV-0094920_1	COG4383	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094920_2	665950.HMPREF1025_01581	89.7	1.49e-20	TIGRFAM Phage	N/A
COG	UHGV-0094920_2	COG5362	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0094920_3	phrog_38	246.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0094920_3	UniRef90_UPI0019D30825	734.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0094920_3	665950.HMPREF1025_01581	1035.0	0	TIGRFAM Phage	N/A
COG	UHGV-0094920_3	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0094920_3	PF17289,PF03354,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_4	phrog_426	103.0	3.4e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0094920_4	UniRef90_A0A7X5INT4	306.0	0	N/A	N/A
eggNOG-mapper	UHGV-0094920_4	665950.HMPREF1025_01582	345.0	0	N/A	N/A
Pfam	UHGV-0094920_4	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0094920_4	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_5	phrog_436	45.5	0.00000000000097	N/A	unknown function
eggNOG-mapper	UHGV-0094920_5	665950.HMPREF1025_01583	203.0	0	N/A	N/A
structural_annotation	UHGV-0094920_5	PF10007,MF_01819,TIGR02337,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094920_6	1499689.CCNN01000007_gene1849	53.5	0.000000117	N/A	N/A
PHROG	UHGV-0094920_7	phrog_18218	96.1	3e-28	N/A	unknown function
UniRef90	UHGV-0094920_7	UniRef90_A0A374AVT4	87.4	3.14e-20	Ribonuclease	N/A
eggNOG-mapper	UHGV-0094920_7	742733.HMPREF9469_02858	91.3	1.65e-22	N/A	N/A
PHROG	UHGV-0094920_8	phrog_532	53.1	0.0000000000000059	late transcriptional activator	transcription regulation
UniRef90	UHGV-0094920_8	UniRef90_F3AV32	213.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_8	665950.HMPREF1025_01586	213.0	0	Mor transcription activator	N/A
Pfam	UHGV-0094920_8	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0094920_8	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0094920_8	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
KOfam	UHGV-0094920_9	K11062	170.6	0	entD; probable enterotoxin D	N/A
PHROG	UHGV-0094920_9	phrog_1794	249.8	0	amidase	lysis
UniRef90	UHGV-0094920_9	UniRef90_F3AV33	870.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_9	665950.HMPREF1025_01587	870.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0094920_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0094920_9	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0094920_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0094920_9	PF01832,NF038016,COG1705,COG5632,COG4991	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094920_10	665950.HMPREF1025_01588	105.0	8.89e-30	N/A	N/A
UniRef90	UHGV-0094920_11	UniRef90_M9LYQ3	88.6	5.92e-18	Permease component	N/A
eggNOG-mapper	UHGV-0094920_11	665950.HMPREF1025_01589	436.0	0	N/A	N/A
KOfam	UHGV-0094920_12	K06284	55.9	8.3e-16	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0094920_12	phrog_4681	46.3	0.00000000000052	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0094920_12	UniRef90_F3AV36	177.0	0	SpoVT-AbrB domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_12	665950.HMPREF1025_01590	177.0	0	toxin-antitoxin pair type II binding	N/A
Pfam	UHGV-0094920_12	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-0094920_12	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0094920_12	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_13	phrog_33075	78.1	9.1e-23	N/A	unknown function
UniRef90	UHGV-0094920_13	UniRef90_UPI00156FC632	78.6	3.23e-16	addiction module toxin RelE	N/A
eggNOG-mapper	UHGV-0094920_13	665950.HMPREF1025_01591	246.0	0	SPTR Toxin-antitoxin system, toxin component, RelE family	N/A
PHROG	UHGV-0094920_15	phrog_286	90.5	2e-26	N/A	unknown function
UniRef90	UHGV-0094920_15	UniRef90_A0A4V3RXQ8	265.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0094920_15	665950.HMPREF1025_01593	320.0	0	N/A	N/A
Pfam	UHGV-0094920_15	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
COG	UHGV-0094920_15	COG4382	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0094920_15	PF06252	N/A	N/A	N/A	N/A
KOfam	UHGV-0094920_17	K12283	44.7	0.0000000000014	mshM; MSHA biogenesis protein MshM	N/A
PHROG	UHGV-0094920_17	phrog_296	157.2	0	DNA transposition protein	integration and excision
UniRef90	UHGV-0094920_17	UniRef90_A0A416HFA0	509.0	0	ATPase	N/A
eggNOG-mapper	UHGV-0094920_17	665950.HMPREF1025_01595	633.0	0	PFAM Helix-turn-helix	N/A
Pfam	UHGV-0094920_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0094920_17	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0094920_17	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0094920_17	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_19	phrog_310	205.9	0	transposase	integration and excision
UniRef90	UHGV-0094920_19	UniRef90_F3AV43	722.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_19	665950.HMPREF1025_01597	722.0	0	PFAM Transposase-like, Mu	N/A
Pfam	UHGV-0094920_19	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0094920_19	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
PHROG	UHGV-0094920_20	phrog_310	96.5	3.3e-28	transposase	integration and excision
UniRef90	UHGV-0094920_20	UniRef90_A0A7U9NHU3	538.0	0	DDE_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_20	665950.HMPREF1025_01597	594.0	0	PFAM Transposase-like, Mu	N/A
COG	UHGV-0094920_20	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
PHROG	UHGV-0094920_21	phrog_1468	69.1	3.6e-20	transcriptional repressor	transcription regulation
UniRef90	UHGV-0094920_21	UniRef90_F3AV44	129.0	5.49e-38	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_21	665950.HMPREF1025_01598	129.0	9.21e-39	Helix-turn-helix	N/A
Pfam	UHGV-0094920_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0094920_21	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0094920_21	PF01381,NF010465,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_23	phrog_4292	65.6	4.7e-19	N/A	unknown function
UniRef90	UHGV-0094920_23	UniRef90_A8ATM6	53.1	0.0000000421	Gp68	N/A
eggNOG-mapper	UHGV-0094920_23	1121091.AUMP01000032_gene3076	50.8	0.000000058	N/A	N/A
KOfam	UHGV-0094920_27	K22300	84.5	1.7e-24	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0094920_27	phrog_3	50.5	0.000000000000079	transcriptional repressor	transcription regulation
UniRef90	UHGV-0094920_27	UniRef90_F3AV50	251.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_27	665950.HMPREF1025_01604	251.0	0	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0094920_27	retron_type_VI_hth_cluster2_1	42.1	0.000000000017	N/A	Retron
Pfam	UHGV-0094920_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0094920_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0094920_27	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_30	phrog_20437	137.5	6.20005e-41	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_30	UniRef90_R6DJZ9	473.0	0	N/A	N/A
eggNOG-mapper	UHGV-0094920_30	97138.C820_00626	126.0	5.73e-32	N/A	N/A
Pfam	UHGV-0094920_30	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0094920_30	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0094920_30	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_32	phrog_11237	90.5	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0094920_32	1235798.C817_02584	75.9	0.00000000000000473	N/A	N/A
KOfam	UHGV-0094920_33	K03111	139.7	3.20001e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0094920_33	phrog_44	146.0	2.00386e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_33	UniRef90_R6DH82	322.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0094920_33	411459.RUMOBE_01118	189.0	0	N/A	N/A
Pfam	UHGV-0094920_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0094920_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0094920_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0094920_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0094920_33	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0094920_35	K03497	60.5	3.6e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0094920_35	phrog_15982	258.9	0	N/A	unknown function
UniRef90	UHGV-0094920_35	UniRef90_R6DUH4	833.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_35	411470.RUMGNA_00213	208.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0094920_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0094920_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-0094920_36	K03496	160.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0094920_36	phrog_164	137.4	1.2e-40	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_36	UniRef90_R6DJZ3	520.0	0	CobQ/CobB/MinD/ParA nucleotide binding domain protein	N/A
eggNOG-mapper	UHGV-0094920_36	411459.RUMOBE_01750	191.0	0	CobQ CobB MinD ParA nucleotide binding domain protein	N/A
Pfam	UHGV-0094920_36	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0094920_36	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0094920_36	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0094920_39	PF07378,MF_00783,COG5443	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_41	phrog_424	99.8	3.2e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0094920_41	UniRef90_A0A3D5WJX6	478.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0094920_41	1410650.JHWL01000037_gene617	250.0	0	sulfate reduction	N/A
COG	UHGV-0094920_41	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0094920_41	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0094920_44	UniRef90_UPI00189FFD6C	57.8	0.00000000402	glutathione peroxidase	N/A
KOfam	UHGV-0094920_45	K03091	97.9	1.4e-28	sigH; RNA polymerase sporulation-specific sigma factor	N/A
UniRef90	UHGV-0094920_45	UniRef90_A0A3D5WJB9	342.0	0	Sigma70_r2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_45	1121428.DESHY_20127___1	73.2	0.000000000000138	sigma factor activity	N/A
Pfam	UHGV-0094920_45	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
NCBIFam	UHGV-0094920_45	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0094920_45	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0094920_45	PF04545,PF04542,MF_00959,NF006158,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_46	phrog_3490	163.4	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_46	UniRef90_A0A3D5WJ50	433.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_46	1232453.BAIF02000057_gene1143	217.0	0	N/A	N/A
Pfam	UHGV-0094920_46	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0094920_46	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_47	phrog_1029	305.4	0	N/A	unknown function
UniRef90	UHGV-0094920_47	UniRef90_A0A3D5WKT6	446.0	0	Peptidase S59 domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_47	1232453.BAIF02000057_gene1140	287.0	0	N/A	N/A
structural_annotation	UHGV-0094920_47	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_48	phrog_997	156.0	0	replication terminator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0094920_48	1232453.BAIF02000057_gene1139	156.0	0	N/A	N/A
KOfam	UHGV-0094920_50	K03111	132.5	5.3e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0094920_50	phrog_44	140.0	1.6e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_50	UniRef90_A0A3D5WJ48	292.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0094920_50	1235790.C805_03410	199.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0094920_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0094920_50	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0094920_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0094920_50	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0094920_50	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0094920_51	K06167	49.4	0.000000000000079	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0094920_51	phrog_392	171.3	0	metal-dependent hydrolase	other
UniRef90	UHGV-0094920_51	UniRef90_A0A3D5WJ96	477.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0094920_51	1443122.Z958_05735	167.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0094920_51	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
dbAPIS	UHGV-0094920_51	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0094920_51	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0094920_51	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0094920_52	phrog_561	175.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_52	UniRef90_UPI001A8D427A	206.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0094920_52	537013.CLOSTMETH_01715	203.0	0	N/A	N/A
structural_annotation	UHGV-0094920_52	NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0094920_54	K19171	99.7	2.9e-29	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0094920_54	phrog_77	246.2	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0094920_54	UniRef90_R6VNB9	791.0	0	Putative RecF/RecN/SMC N domain	N/A
eggNOG-mapper	UHGV-0094920_54	1294142.CINTURNW_1008	319.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0094920_54	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0094920_54	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0094920_54	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0094920	Yes	30,258	44	84	1