vOTU vOTU-133314

vOTU: vOTU-133314

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-133314
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-02169 → vGENUS-14045 → vOTU-133314
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0012891
Biosample ID	N/A
Genome length (bp)	21,113 bps
CheckV completeness	71.04% (Medium-quality)
CDS count	29
CDS density	95.12%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	109	Host agreement	75.23
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0012891_2	phrog_9474	142.7	8.70206e-43	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0012891_2	697284.ERIC2_c10590	127.0	1.95e-31	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0012891_2	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
COG	UHGV-0012891_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0012891_2	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_3	phrog_954	209.7	0	DNA methyltransferase	other
UniRef90	UHGV-0012891_3	UniRef90_A0A1Q5XL74	206.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0012891_3	1497679.EP56_08455	204.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0012891_3	MTase_II_00074	213.8	0	Type II methyltransferase	RM
Pfam	UHGV-0012891_3	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0012891_3	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0012891_3	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
KOfam	UHGV-0012891_4	K01160	55.5	0.0000000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0012891_4	phrog_34	56.0	8.5e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0012891_4	UniRef90_UPI001C1103D0	132.0	2.34e-37	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0012891_4	796940.HMPREF9628_00163	122.0	2.08e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0012891_4	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0012891_4	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0012891_4	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0012891_7	K07726	44.7	0.0000000000025	K07726; putative transcriptional regulator	N/A
Pfam	UHGV-0012891_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0012891_7	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0012891_7	PF13560,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0012891_10	K06909	130.3	1.8e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0012891_10	phrog_10250	197.6	0	N/A	unknown function
UniRef90	UHGV-0012891_10	UniRef90_A0A316PPL4	583.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0012891_10	877414.ATWA01000001_gene906	542.0	0	Terminase-like family	N/A
Pfam	UHGV-0012891_10	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0012891_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0012891_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0012891_10	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_11	phrog_64	351.4	0	portal protein	head and packaging
UniRef90	UHGV-0012891_11	UniRef90_A0A316PPQ6	607.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0012891_11	877414.ATWA01000001_gene907	544.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0012891_11	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0012891_11	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0012891_11	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_12	phrog_115	279.5	0	minor head protein	head and packaging
UniRef90	UHGV-0012891_12	UniRef90_R6J0C1	248.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0012891_12	742733.HMPREF9469_01825	214.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0012891_12	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0012891_12	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0012891_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012891_12	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_13	phrog_2657	196.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0012891_13	UniRef90_UPI00164A231C	311.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0012891_13	411490.ANACAC_00702	282.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0012891_13	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0012891_13	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0012891_13	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0012891_13	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_14	phrog_172	118.9	5.1e-35	head scaffolding protein	head and packaging
UniRef90	UHGV-0012891_14	UniRef90_A0A316RQZ9	111.0	9.88e-27	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0012891_14	1499683.CCFF01000014_gene3909	97.1	5.58e-22	N/A	N/A
Pfam	UHGV-0012891_14	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0012891_14	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_15	phrog_283	289.9	0	major head protein	head and packaging
UniRef90	UHGV-0012891_15	UniRef90_A0A1I2NUB2	509.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0012891_15	1499683.CCFF01000014_gene3908	505.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0012891_15	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0012891_15	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012891_17	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_19	phrog_5	46.1	0.0000000000013	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0012891_19	1235800.C819_00481	70.5	0.000000000000628	N/A	N/A
Pfam	UHGV-0012891_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0012891_19	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_20	phrog_78	44.2	0.0000000000034	tail terminator	connector
structural_annotation	UHGV-0012891_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_21	phrog_158	49.4	0.000000000000081	major tail protein	tail
UniRef90	UHGV-0012891_21	UniRef90_R5YR40	181.0	0	Major tail protein putative	N/A
eggNOG-mapper	UHGV-0012891_21	1280692.AUJL01000025_gene2074	74.7	0.00000000000000375	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0012891_21	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0012891_21	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012891_22	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_24	phrog_1535	161.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0012891_24	1232453.BAIF02000058_gene1637	68.6	0.0000000141	phage tail tape measure protein	N/A
COG	UHGV-0012891_24	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0012891_24	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_25	phrog_1194	89.8	2.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0012891_25	877414.ATWA01000001_gene917	145.0	2.158e-43	N/A	N/A
structural_annotation	UHGV-0012891_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_26	phrog_22212	101.7	3.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0012891_26	469596.HMPREF9488_01318	94.0	4.83e-17	N/A	N/A
structural_annotation	UHGV-0012891_26	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0012891_27	phrog_1863	67.5	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0012891_27	693746.OBV_18260	108.0	4.18e-30	N/A	N/A
PHROG	UHGV-0012891_28	phrog_443	54.8	0.0000000000000027	holin	lysis
UniRef90	UHGV-0012891_28	UniRef90_UPI001B3C9F75	75.5	1.19e-16	holin	N/A
eggNOG-mapper	UHGV-0012891_28	1298920.KI911353_gene2669	73.9	8.58e-17	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0012891_28	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0012891_28	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0012891_29	K24213	61.9	8.4e-18	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0012891_29	phrog_5073	66.0	4.1e-19	tail fiber protein	tail
Pfam	UHGV-0012891_29	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0012891_29	PF20622,NF033814,COG2372	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0012891	Yes	21,113	57	71	1