vOTU vOTU-133362

vOTU: vOTU-133362

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-133362
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium celatum
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-03670 → vOTU-133362
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0174593
Biosample ID	SAMN07501104
Genome length (bp)	20,156 bps
CheckV completeness	57.55% (Medium-quality)
CDS count	28
CDS density	90.40%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium	Total connections	4	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium celatum	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0174593_2	K03111	124.7	1.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0174593_2	phrog_44	123.5	1.8e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174593_2	UniRef90_A0A1C6KXJ1	163.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0174593_2	545697.HMPREF0216_02833	162.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0174593_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0174593_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0174593_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0174593_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0174593_2	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_4	phrog_32519	57.7	9.8e-17	N/A	unknown function
PHROG	UHGV-0174593_6	phrog_6504	53.6	0.0000000000000034	N/A	unknown function
KOfam	UHGV-0174593_7	K04763	211.6	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0174593_7	phrog_1	176.0	0	integrase	integration and excision
UniRef90	UHGV-0174593_7	UniRef90_A0A174DBC4	634.0	0	Integrase/recombinase (XerC/CodV family)	N/A
eggNOG-mapper	UHGV-0174593_7	1211817.CCAT010000049_gene2471	267.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0174593_7	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0174593_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174593_7	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0174593_7	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0174593_8	K09777	98.5	4.4e-29	remA; extracellular matrix regulatory protein A	N/A
UniRef90	UHGV-0174593_8	UniRef90_A0A8I0DNB1	112.0	6.53e-31	N/A	N/A
eggNOG-mapper	UHGV-0174593_8	1414720.CBYM010000001_gene689	112.0	1.1e-31	N/A	N/A
Pfam	UHGV-0174593_8	PF04025	N/A	N/A	Extracellular matrix regulatory protein A-like	RemA-like
NCBIFam	UHGV-0174593_8	NF003315.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0174593_8	COG2052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174593_8	PF04025,MF_01503,NF003315,COG2052	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_9	phrog_9628	130.1	8.8e-39	N/A	unknown function
UniRef90	UHGV-0174593_9	UniRef90_A0A8I0DLJ3	200.0	0	DNA-binding response regulator	N/A
eggNOG-mapper	UHGV-0174593_9	1414720.CBYM010000001_gene690	200.0	0	N/A	N/A
structural_annotation	UHGV-0174593_9	PF06056,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_10	phrog_3928	44.8	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0174593_10	1414720.CBYM010000040_gene1639	55.1	0.00000000278	N/A	N/A
KOfam	UHGV-0174593_11	K04763	81.4	1.4e-23	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0174593_11	phrog_216	130.9	7.7e-39	integrase	integration and excision
UniRef90	UHGV-0174593_11	UniRef90_A0A1C6DLA6	407.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0174593_11	1414720.CBYM010000001_gene692	415.0	0	Phage integrase family	N/A
Pfam	UHGV-0174593_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174593_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0174593_11	PF00589,MF_01807,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_12	phrog_309	92.7	3.6e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0174593_12	UniRef90_UPI0012EE5C69	270.0	0	Xaa-His dipeptidase	N/A
eggNOG-mapper	UHGV-0174593_12	1414720.CBYM010000001_gene693	270.0	0	N/A	N/A
structural_annotation	UHGV-0174593_12	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_13	phrog_144	52.5	0.000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174593_13	UniRef90_E3GPG7	103.0	2.5e-25	Gp50 protein	N/A
eggNOG-mapper	UHGV-0174593_13	903814.ELI_3119	103.0	4.2e-26	HNH endonuclease	N/A
COG	UHGV-0174593_13	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0174593_14	phrog_83	76.2	5.4e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0174593_14	UniRef90_A0A1C6K104	277.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0174593_14	1291050.JAGE01000001_gene2918	198.0	0	phage terminase small subunit	N/A
Pfam	UHGV-0174593_14	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0174593_14	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0174593_14	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0174593_14	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_15	phrog_9	307.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0174593_15	UniRef90_A0A1C6K0V5	1109.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0174593_15	755731.Clo1100_1160	842.0	0	Terminase	N/A
Pfam	UHGV-0174593_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0174593_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0174593_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0174593_15	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_16	phrog_12	187.5	0	portal protein	head and packaging
UniRef90	UHGV-0174593_16	UniRef90_A0A1C6DLG7	734.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0174593_16	632245.CLP_2617	557.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0174593_16	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0174593_16	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0174593_16	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0174593_16	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0174593_17	K06904	124.5	1.2e-36	N/A	N/A
PHROG	UHGV-0174593_17	phrog_80	150.3	1.68156e-44	head maturation protease	head and packaging
UniRef90	UHGV-0174593_17	UniRef90_A0A1C6K131	394.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0174593_17	1187894.I2E8Y9_9CAUD	257.0	0	peptidase activity	N/A
Pfam	UHGV-0174593_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0174593_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-0174593_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_18	phrog_10	133.2	2.7e-39	major head protein	head and packaging
UniRef90	UHGV-0174593_18	UniRef90_A0A8I0A645	508.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0174593_18	1262449.CP6013_1042	433.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0174593_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0174593_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0174593_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0174593_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_19	phrog_40	48.0	0.0000000000002	head-tail adaptor Ad1	connector
UniRef90	UHGV-0174593_19	UniRef90_A0A8I0A549	136.0	3.78e-40	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0174593_19	1195236.CTER_5110	111.0	8.14e-31	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0174593_19	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0174593_19	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0174593_19	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_20	phrog_25	56.0	7.4e-16	head closure Hc1	connector
UniRef90	UHGV-0174593_20	UniRef90_A0A336Q665	98.6	1.78e-24	Phage head-tail adaptor	N/A
Pfam	UHGV-0174593_20	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0174593_20	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0174593_20	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0174593_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174593_21	UniRef90_UPI0018AAD4F8	116.0	6.62e-31	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0174593_21	935948.KE386495_gene1330	58.2	0.00000000532	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0174593_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0174593_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0174593_21	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_22	phrog_88	42.1	0.000000000013	major tail protein	tail
structural_annotation	UHGV-0174593_22	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174593_23	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0174593_24	K22804	53.4	0.0000000000000014	SMC6; structural maintenance of chromosomes protein 6	N/A
PHROG	UHGV-0174593_24	phrog_1272	318.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0174593_24	UniRef90_UPI000C08A9B9	392.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0174593_24	573061.Clocel_3533	219.0	0	tail tape measure protein	N/A
Pfam	UHGV-0174593_24	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0174593_24	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0174593_24	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0174593_24	PF10145,PF05384,TIGR01760,TIGR02559,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_25	phrog_33	54.9	0.0000000000000024	distal tail protein Dit	tail
UniRef90	UHGV-0174593_25	UniRef90_R6G3V4	134.0	1.95e-34	Phage-related protein (Tail protein)	N/A
eggNOG-mapper	UHGV-0174593_25	86416.Clopa_2784	102.0	3.21e-23	Phage tail protein	N/A
structural_annotation	UHGV-0174593_25	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174593_26	UniRef90_L1QEZ1	196.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0174593_26	86416.Clopa_2783	224.0	0	N/A	N/A
structural_annotation	UHGV-0174593_26	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0174593_27	phrog_1220	49.8	0.000000000000054	head protein	head and packaging
eggNOG-mapper	UHGV-0174593_27	86416.Clopa_1911	70.5	0.0000000000198	N/A	N/A
structural_annotation	UHGV-0174593_27	PF20747	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174593_28	545697.HMPREF0216_02867	238.0	0	domain, Protein	N/A
Pfam	UHGV-0174593_28	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0174593_28	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0174593	Yes	20,156	30	58	1