vOTU vOTU-133365

vOTU: vOTU-133365

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-133365
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 → vSUBFAM-07012 → vOTU-133365
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium saudiense
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0174596
Biosample ID	SAMN07501104
Genome length (bp)	25,809 bps
CheckV completeness	67.74% (Medium-quality)
CDS count	43
CDS density	92.46%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-603 → CAG-603 sp900066105	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium saudiense	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0174596_1	545697.HMPREF0216_02867	285.0	0	domain, Protein	N/A
Pfam	UHGV-0174596_1	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0174596_1	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-0174596_4	phrog_9886	214.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0174596_4	1235792.C808_05350	191.0	0	Prophage endopeptidase tail	N/A
COG	UHGV-0174596_4	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0174596_5	phrog_1194	133.3	8.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0174596_5	1414720.CBYM010000002_gene561	191.0	0	N/A	N/A
Pfam	UHGV-0174596_5	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0174596_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_6	phrog_31409	339.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0174596_6	UniRef90_A0A1C6GVH2	451.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0174596_6	1414720.CBYM010000002_gene562	1047.0	0	phage tail tape measure protein	N/A
COG	UHGV-0174596_6	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174596_6	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_7	phrog_19318	52.9	0.0000000000000065	N/A	unknown function
eggNOG-mapper	UHGV-0174596_7	1414720.CBYM010000001_gene706	65.1	0.0000000000016	N/A	N/A
PHROG	UHGV-0174596_8	phrog_2115	51.6	0.000000000000019	tail protein	tail
eggNOG-mapper	UHGV-0174596_8	1414720.CBYM010000002_gene564	172.0	0	N/A	N/A
structural_annotation	UHGV-0174596_8	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_10	phrog_158	65.3	1.3e-18	major tail protein	tail
UniRef90	UHGV-0174596_10	UniRef90_A0A1C6JNH2	257.0	0	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-0174596_10	1414720.CBYM010000002_gene566	257.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0174596_10	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0174596_10	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174596_11	UniRef90_UPI000BB98E7D	132.0	3.17e-37	N/A	N/A
eggNOG-mapper	UHGV-0174596_11	1414720.CBYM010000002_gene567	218.0	0	N/A	N/A
structural_annotation	UHGV-0174596_11	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_12	phrog_5	64.3	2.6e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0174596_12	UniRef90_A0A1C6JN94	280.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0174596_12	1414720.CBYM010000002_gene568	280.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0174596_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0174596_12	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_13	phrog_25	88.9	4.2e-26	head closure Hc1	connector
UniRef90	UHGV-0174596_13	UniRef90_A0A1C6JMX8	172.0	0	Bacteriophage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0174596_13	1414720.CBYM010000002_gene569	172.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0174596_13	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0174596_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0174596_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0174596_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_14	phrog_40	49.5	0.000000000000064	head-tail adaptor Ad1	connector
UniRef90	UHGV-0174596_14	UniRef90_UPI001055080F	140.0	9.7096e-42	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0174596_14	1414720.CBYM010000002_gene570	174.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0174596_14	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0174596_14	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0174596_14	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_15	phrog_6865	51.5	0.000000000000017	N/A	unknown function
structural_annotation	UHGV-0174596_15	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_16	phrog_10	213.0	0	major head protein	head and packaging
UniRef90	UHGV-0174596_16	UniRef90_UPI0018A9C330	688.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0174596_16	1414720.CBYM010000002_gene572	670.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0174596_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0174596_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0174596_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0174596_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0174596_17	K06904	104.4	1.6e-30	N/A	N/A
PHROG	UHGV-0174596_17	phrog_80	132.0	6.7e-39	head maturation protease	head and packaging
UniRef90	UHGV-0174596_17	UniRef90_UPI00164AE523	355.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0174596_17	1414720.CBYM010000002_gene573	354.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0174596_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0174596_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0174596_17	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0174596_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_18	phrog_12	189.5	0	portal protein	head and packaging
UniRef90	UHGV-0174596_18	UniRef90_UPI0004B5AC91	759.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0174596_18	1414720.CBYM010000002_gene574	759.0	0	Portal protein	N/A
Pfam	UHGV-0174596_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0174596_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0174596_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0174596_18	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_19	phrog_9	240.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0174596_19	UniRef90_UPI0004B72672	1097.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0174596_19	1414720.CBYM010000002_gene575	1097.0	0	Terminase	N/A
Pfam	UHGV-0174596_19	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0174596_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0174596_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0174596_19	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174596_20	UniRef90_A0A1C6JNN5	226.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0174596_20	1414720.CBYM010000002_gene576	352.0	0	N/A	N/A
structural_annotation	UHGV-0174596_20	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0174596_21	K07451	49.7	0.000000000000069	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0174596_21	phrog_144	83.0	3.7e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174596_21	UniRef90_A0A1C6JML1	261.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0174596_21	1414720.CBYM010000002_gene577	261.0	0	HNH nucleases	N/A
Pfam	UHGV-0174596_21	PF01844	N/A	N/A	HNH endonuclease	HNH
UniRef90	UHGV-0174596_23	UniRef90_A0A1C6JMI4	229.0	0	Alternative sigma factor RpoH	N/A
eggNOG-mapper	UHGV-0174596_23	1414720.CBYM010000002_gene578	229.0	0	N/A	N/A
structural_annotation	UHGV-0174596_23	PF04545,MF_00683,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_25	phrog_25509	120.9	4.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0174596_25	1414720.CBYM010000002_gene580	187.0	0	N/A	N/A
UniRef90	UHGV-0174596_26	UniRef90_UPI00177CCF75	169.0	0	N/A	N/A
Pfam	UHGV-0174596_26	PF14300	N/A	N/A	N/A	DUF4375
PHROG	UHGV-0174596_27	phrog_32497	76.4	2.7e-22	N/A	unknown function
UniRef90	UHGV-0174596_27	UniRef90_A0A0E1L1P0	72.4	0.00000000000000149	Amino acid transporter domain protein	N/A
eggNOG-mapper	UHGV-0174596_27	431943.CKL_4011	64.3	0.000000000000312	N/A	N/A
PHROG	UHGV-0174596_29	phrog_98	51.6	0.000000000000017	N/A	unknown function
UniRef90	UHGV-0174596_29	UniRef90_A0A174DKC7	227.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0174596_29	1414720.CBYM010000002_gene585	209.0	0	YopX protein	N/A
Pfam	UHGV-0174596_29	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0174596_29	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174596_30	PF11148,MF_01553,COG5503	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_31	phrog_15609	195.4	0	N/A	unknown function
UniRef90	UHGV-0174596_31	UniRef90_UPI0018AC339E	362.0	0	N/A	N/A
eggNOG-mapper	UHGV-0174596_31	632245.CLP_1620	199.0	0	N/A	N/A
Pfam	UHGV-0174596_31	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0174596_31	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0174596_31	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_32	phrog_8470	289.7	0	N/A	unknown function
UniRef90	UHGV-0174596_32	UniRef90_UPI0018AC6B28	779.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0174596_32	649747.HMPREF0083_05326	311.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0174596_32	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0174596_32	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_33	phrog_7445	54.4	0.0000000000000023	N/A	unknown function
UniRef90	UHGV-0174596_33	UniRef90_UPI0006DC27CB	159.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0174596_33	1395513.P343_08075	59.3	0.00000000177	N/A	N/A
Pfam	UHGV-0174596_33	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0174596_33	PF14058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174596_34	1414720.CBYM010000002_gene587	114.0	9.05e-33	N/A	N/A
PHROG	UHGV-0174596_35	phrog_824	153.1	0	N/A	unknown function
UniRef90	UHGV-0174596_35	UniRef90_A0A174DJP8	254.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0174596_35	1414720.CBYM010000002_gene588	254.0	0	VRR-NUC domain	N/A
Pfam	UHGV-0174596_35	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0174596_35	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0174596_36	phrog_3584	276.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174596_36	UniRef90_I2E8X7	233.0	0	Gp31	N/A
eggNOG-mapper	UHGV-0174596_36	1414720.CBYM010000002_gene589	452.0	0	N/A	N/A
structural_annotation	UHGV-0174596_36	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0174596_41	K18830	61.6	1.7e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0174596_41	phrog_8	46.1	0.00000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-0174596_41	UniRef90_A0A1C6JLU0	238.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0174596_41	1414720.CBYM010000002_gene594	238.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0174596_41	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0174596_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0174596_41	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0174596_42	K06400	282.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0174596_42	phrog_95	301.8	0	integrase	integration and excision
UniRef90	UHGV-0174596_42	UniRef90_A0A1C6JLN1	990.0	0	DNA-invertase hin	N/A
eggNOG-mapper	UHGV-0174596_42	1414720.CBYM010000002_gene595	988.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0174596_42	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0174596_42	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0174596_42	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0174596_43	K03976	126.0	3.9e-37	ybaK, ebsC; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]	N/A
PHROG	UHGV-0174596_43	phrog_17858	113.2	1.6e-33	N/A	unknown function
UniRef90	UHGV-0174596_43	UniRef90_L1QG73	206.0	0	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase	N/A
eggNOG-mapper	UHGV-0174596_43	545697.HMPREF0216_01865	206.0	0	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily	N/A
Pfam	UHGV-0174596_43	PF04073	N/A	N/A	Aminoacyl-tRNA editing domain	tRNA_edit
COG	UHGV-0174596_43	COG2606	N/A	N/A	Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0174596	Yes	25,809	29	68	1