vOTU vOTU-133422

vOTU: vOTU-133422

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-133422
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00934 → vGENUS-03651 → vOTU-133422
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter
Host range breadth	Genus
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1989395
Biosample ID	N/A
Genome length (bp)	27,003 bps
CheckV completeness	66.16% (Medium-quality)
CDS count	32
CDS density	89.50%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Intestinibacter	Total connections	25	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.16)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1989395_1	phrog_824	117.3	6.7e-35	N/A	unknown function
UniRef90	UHGV-1989395_1	UniRef90_UPI001105A33E	290.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1989395_1	411468.CLOSCI_00556	120.0	6.36e-33	VRR_NUC	N/A
Pfam	UHGV-1989395_1	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-1989395_2	phrog_3584	183.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1989395_2	UniRef90_A0A1I5LZL1	169.0	0	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1989395_2	1196322.A370_05744	194.0	0	N/A	N/A
structural_annotation	UHGV-1989395_2	PF21578	N/A	N/A	N/A	N/A
UniRef90	UHGV-1989395_4	UniRef90_UPI001105B88F	225.0	0	Rho termination factor N-terminal domain-containing protein	N/A
Pfam	UHGV-1989395_4	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1989395_4	COG1158	N/A	N/A	Transcription termination factor Rho	N/A
PHROG	UHGV-1989395_5	phrog_4370	57.6	2.1e-16	excisionase	integration and excision
UniRef90	UHGV-1989395_5	UniRef90_A0A1G9U323	109.0	3.67e-29	DNA binding domain-containing protein, excisionase family	N/A
NCBIFam	UHGV-1989395_5	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
KOfam	UHGV-1989395_7	K18830	57.3	3.4e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1989395_7	phrog_4	45.7	0.0000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-1989395_7	UniRef90_A0A1C6GW92	106.0	2e-27	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-1989395_7	1095750.HMPREF9970_1686	100.0	1.09e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1989395_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1989395_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1989395_7	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_9	K14059	263.8	0	int; integrase	N/A
PHROG	UHGV-1989395_9	phrog_1	213.5	0	integrase	integration and excision
UniRef90	UHGV-1989395_9	UniRef90_A0A2P2BRF6	417.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1989395_9	1151292.QEW_3300	296.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1989395_9	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1989395_9	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1989395_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1989395_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1989395_9	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_10	K03466	130.1	1.5e-38	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1989395_10	phrog_1358	163.1	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1989395_10	UniRef90_UPI001AE0A1D4	111.0	5.94e-24	N/A	N/A
eggNOG-mapper	UHGV-1989395_10	1463900.JOIX01000030_gene4772	95.1	2.37e-18	N/A	N/A
PADLOC	UHGV-1989395_10	SspH_00004	66.3	1.5e-19	SspH	SSP
Pfam	UHGV-1989395_10	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1989395_10	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
PHROG	UHGV-1989395_11	phrog_9996	66.6	4.7e-19	N/A	unknown function
UniRef90	UHGV-1989395_11	UniRef90_UPI0011071500	355.0	0	replication-relaxation family protein	N/A
Pfam	UHGV-1989395_11	PF13814	N/A	N/A	Replication-relaxation	Replic_Relax
structural_annotation	UHGV-1989395_11	PF13814,MF_01819,NF041423,COG1733	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_12	K07727	64.1	3.7e-18	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1989395_12	UniRef90_A0A2K4ZQ95	95.1	3.11e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1989395_12	1449050.JNLE01000005_gene5267	83.2	3.42e-18	Filamentation induced by cAMP protein fic	N/A
Pfam	UHGV-1989395_12	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1989395_12	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-1989395_12	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_14	K07485	315.8	0	K07485; transposase	N/A
PHROG	UHGV-1989395_14	phrog_5749	516.7	0	transposase	integration and excision
UniRef90	UHGV-1989395_14	UniRef90_A0A0A8WEF4	525.0	0	Transposase	N/A
eggNOG-mapper	UHGV-1989395_14	1582152.A0A0A8WEF4_9CAUD	525.0	0	Helix-turn-helix domain of transposase family ISL3	N/A
Pfam	UHGV-1989395_14	PF14690	N/A	N/A	zinc-finger of transposase IS204/IS1001/IS1096/IS1165	zf-ISL3
Pfam	UHGV-1989395_14	PF13542	N/A	N/A	Helix-turn-helix domain of transposase family ISL3	HTH_Tnp_ISL3
Pfam	UHGV-1989395_14	PF01610	N/A	N/A	Transposase	DDE_Tnp_ISL3
NCBIFam	UHGV-1989395_14	NF033550.5	N/A	N/A	ISL3 family transposase	N/A
structural_annotation	UHGV-1989395_14	PF01610,PF20020,NF033550,COG3464	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_16	K03733	124.4	1.4e-36	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1989395_16	phrog_216	93.8	1.5e-27	integrase	integration and excision
UniRef90	UHGV-1989395_16	UniRef90_A0A1I0V2F7	110.0	1.77e-27	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1989395_16	632245.CLP_2897	129.0	1.24e-34	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1989395_16	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1989395_16	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1989395_16	PF00589,MF_01807,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1989395_17	K01448	133.0	2.5e-39	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1989395_17	phrog_435	118.6	6.7e-35	endolysin	lysis
UniRef90	UHGV-1989395_17	UniRef90_UPI0018A97EC2	478.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1989395_17	445973.CLOBAR_01731	410.0	0	Ami_3	N/A
Pfam	UHGV-1989395_17	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1989395_17	PF19087	N/A	N/A	N/A	DUF5776
COG	UHGV-1989395_17	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1989395_17	PF01520,PF19087,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_18	phrog_1129	82.2	3.6e-24	holin	lysis
UniRef90	UHGV-1989395_18	UniRef90_A0A0B3VH17	123.0	6.45e-35	Holin	N/A
eggNOG-mapper	UHGV-1989395_18	702450.CUW_2556	111.0	6.25e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1989395_18	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1989395_18	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_19	phrog_1863	69.1	2.8e-20	N/A	unknown function
UniRef90	UHGV-1989395_19	UniRef90_A0A2K9NYV1	59.3	0.000000000622	Holin	N/A
eggNOG-mapper	UHGV-1989395_19	1232449.BAHV02000017_gene1511	65.1	0.000000000000674	N/A	N/A
UniRef90	UHGV-1989395_20	UniRef90_A0A542AKB6	90.5	7.69e-22	Anaerobic ribonucleoside-triphosphate reductase-like protein	N/A
eggNOG-mapper	UHGV-1989395_20	1105031.HMPREF1141_0490	86.3	6.06e-21	Anaerobic ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-1989395_20	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
COG	UHGV-1989395_20	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A
PHROG	UHGV-1989395_21	phrog_16573	45.0	0.0000000000017	N/A	unknown function
Pfam	UHGV-1989395_21	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-1989395_21	PF01522	N/A	N/A	Polysaccharide deacetylase	Polysacc_deac_1
KOfam	UHGV-1989395_22	K11062	90.1	2.5e-26	entD; probable enterotoxin D	N/A
PHROG	UHGV-1989395_22	phrog_7043	390.4	0	tail protein	tail
UniRef90	UHGV-1989395_22	UniRef90_UPI0018AA7BAA	2268.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1989395_22	1292035.H476_1004	447.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1989395_22	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1989395_22	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-1989395_22	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
NCBIFam	UHGV-1989395_22	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1989395_22	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1989395_22	PF14594,PF08239,PF19081,PF13229,TIGR01665,NF040678,COG4926,COG4991,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_23	phrog_33	70.0	5.5e-20	distal tail protein Dit	tail
UniRef90	UHGV-1989395_23	UniRef90_A0A1C5VG03	207.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1989395_23	573061.Clocel_3532	155.0	2.38221e-44	tail component	N/A
COG	UHGV-1989395_23	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1989395_23	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_24	phrog_58	255.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1989395_24	665950.HMPREF1025_02660	146.0	4.5e-33	phage tail tape measure protein	N/A
NCBIFam	UHGV-1989395_24	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1989395_24	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1989395_24	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-1989395_26	UniRef90_A0A316S919	187.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1989395_26	1121866.AUGK01000006_gene884	146.0	5.94991e-42	N/A	N/A
structural_annotation	UHGV-1989395_26	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_27	phrog_5509	124.1	6e-37	neck protein	connector
eggNOG-mapper	UHGV-1989395_27	936140.AEOT01000014_gene1361	62.4	0.000000000147	N/A	N/A
structural_annotation	UHGV-1989395_27	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1989395_28	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_29	phrog_5635	64.8	1.4e-18	head-tail adaptor	connector
UniRef90	UHGV-1989395_29	UniRef90_UPI0011070497	167.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1989395_29	1220589.CD32_01710	58.9	0.00000000161	N/A	N/A
NCBIFam	UHGV-1989395_29	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1989395_29	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_30	phrog_749	58.9	8.1e-17	N/A	unknown function
UniRef90	UHGV-1989395_30	UniRef90_A0A1I3QJG6	127.0	3.26e-36	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1989395_30	1211817.CCAT010000008_gene943	53.5	0.0000000451	N/A	N/A
PHROG	UHGV-1989395_31	phrog_10	91.1	1.2e-26	major head protein	head and packaging
UniRef90	UHGV-1989395_31	UniRef90_A0A1C5YEV1	488.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1989395_31	1415774.U728_1252	310.0	0	Phage capsid family	N/A
Pfam	UHGV-1989395_31	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1989395_31	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1989395_31	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1989395_31	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1989395_32	phrog_94	43.2	0.0000000000058	head maturation protease	head and packaging
eggNOG-mapper	UHGV-1989395_32	1232452.BAIB02000007_gene1626	57.0	0.000000068	Belongs to the peptidase S14 family	N/A
COG	UHGV-1989395_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1989395	Yes	27,003	30	66	1