vOTU vOTU-134785

vOTU: vOTU-134785

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-134785
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00155 → vSUBFAM-00348 → vGENUS-03828 → vOTU-134785
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0001283
Biosample ID	N/A
Genome length (bp)	29,050 bps
CheckV completeness	65.03% (Medium-quality)
CDS count	40
CDS density	95.91%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0001283_1	phrog_124	118.6	6.2e-35	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001283_1	UniRef90_A0A8D9PDX3	449.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0001283_1	1499967.BAYZ01000197_gene3023	63.2	0.00000000413	plasmid maintenance	N/A
Pfam	UHGV-0001283_1	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0001283_1	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0001283_1	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0001283_2	K09125	134.0	9.90001e-40	yhhQ; queuosine precursor transporter	N/A
PHROG	UHGV-0001283_2	phrog_4899	70.7	2.4e-20	N/A	unknown function
UniRef90	UHGV-0001283_2	UniRef90_UPI000F068A5D	254.0	0	queuosine precursor transporter	N/A
eggNOG-mapper	UHGV-0001283_2	1203606.HMPREF1526_02400	250.0	0	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage	N/A
Pfam	UHGV-0001283_2	PF02592	N/A	N/A	Putative vitamin uptake transporter	Vut_1
NCBIFam	UHGV-0001283_2	TIGR00697.1	N/A	N/A	queuosine precursor transporter	N/A
COG	UHGV-0001283_2	COG1738	N/A	N/A	N/A	N/A
HAMAP	UHGV-0001283_2	MF_02088	N/A	N/A	Probable queuosine precursor transporter	N/A
structural_annotation	UHGV-0001283_2	PF02592,MF_02088,TIGR00697,COG1738	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_4	phrog_3724	54.6	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0001283_4	UniRef90_A0A3M8AMJ4	53.9	0.0000019	N/A	N/A
Pfam	UHGV-0001283_4	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0001283_4	PF05037,NF011800	N/A	N/A	N/A	N/A
KOfam	UHGV-0001283_5	K02316	103.3	2.1e-30	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0001283_5	phrog_18685	133.1	1.3e-39	N/A	unknown function
UniRef90	UHGV-0001283_5	UniRef90_A0A8D9PDW5	1218.0	0	DNA directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0001283_5	360911.EAT1b_0006	166.0	3.43e-39	DNA primase activity	N/A
PADLOC	UHGV-0001283_5	drt-cluster192	46.2	2.1e-24	DRT	DRT
Pfam	UHGV-0001283_5	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-0001283_5	PF13662	N/A	N/A	Toprim domain	Toprim_4
Pfam	UHGV-0001283_5	PF00493	N/A	N/A	MCM P-loop domain	MCM
COG	UHGV-0001283_5	COG1241	N/A	N/A	DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family	N/A
structural_annotation	UHGV-0001283_5	PF00493,PF01807,PF13155,PF14947,MF_00974,MF_01314,NF040949,TIGR01391,COG1241	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001283_6	UniRef90_A0A8D9UHA8	107.0	1.13e-28	AspA family protein	N/A
structural_annotation	UHGV-0001283_6	PF21100,MF_01911,NF040642,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_7	phrog_229	58.6	1.4e-16	MazG-like pyrophosphatase	other
UniRef90	UHGV-0001283_7	UniRef90_A0A7C6S799	85.1	6.26e-19	Nucleoside triphosphate pyrophosphohydrolase family protein	N/A
Pfam	UHGV-0001283_7	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0001283_7	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0001283_7	PF01503,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_8	phrog_236	109.5	6.2e-32	nucleotide kinase	other
UniRef90	UHGV-0001283_8	UniRef90_A0A7C6S6P5	125.0	4.55e-36	N/A	N/A
eggNOG-mapper	UHGV-0001283_8	749413.E5DV94_9VIRU	80.5	5.18e-19	N/A	N/A
Pfam	UHGV-0001283_8	PF11753	N/A	N/A	N/A	DUF3310
UniRef90	UHGV-0001283_9	UniRef90_A0A1C6DFA0	172.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0001283_9	742735.HMPREF9467_00909	76.3	0.0000000000000127	N/A	N/A
Pfam	UHGV-0001283_9	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0001283_9	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_10	phrog_19058	147.5	7.84727e-44	N/A	unknown function
UniRef90	UHGV-0001283_10	UniRef90_A0A7T8IX45	246.0	0	DNA guanine transglycosylase	N/A
eggNOG-mapper	UHGV-0001283_10	996637.SGM_5178	61.2	0.0000000381	N/A	N/A
structural_annotation	UHGV-0001283_10	PF20314,MF_00168,TIGR00449,COG0343	N/A	N/A	N/A	N/A
KOfam	UHGV-0001283_11	K00601	57.9	1.5e-16	E2.1.2.2; phosphoribosylglycinamide formyltransferase [EC:2.1.2.2]	N/A
UniRef90	UHGV-0001283_11	UniRef90_A0A6J7WW34	81.6	4.01e-16	Formyl transferase, N-terminal	N/A
eggNOG-mapper	UHGV-0001283_11	765869.BDW_11080	55.1	0.000000878	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate	N/A
Pfam	UHGV-0001283_11	PF00551	N/A	N/A	Formyl transferase	Formyl_trans_N
COG	UHGV-0001283_11	COG0299	N/A	N/A	Folate-dependent phosphoribosylglycinamide formyltransferase PurN	N/A
structural_annotation	UHGV-0001283_11	PF00551,MF_01930,TIGR00655,COG0299	N/A	N/A	N/A	N/A
KOfam	UHGV-0001283_12	K02335	375.9	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0001283_12	phrog_17	364.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001283_12	UniRef90_A0A7C6W992	967.0	0	DNA polymerase I	N/A
eggNOG-mapper	UHGV-0001283_12	935948.KE386495_gene2287	250.0	0	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	N/A
PADLOC	UHGV-0001283_12	drt-cluster58	91.2	1.8e-26	DRT	DRT
Pfam	UHGV-0001283_12	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-0001283_12	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0001283_12	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0001283_12	PF00476,PF01612,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-0001283_13	K14440	207.6	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0001283_13	phrog_62	301.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0001283_13	UniRef90_A0A8D9PDR8	644.0	0	Chromatin remodeling complex ATPase	N/A
eggNOG-mapper	UHGV-0001283_13	136037.KDR10882	135.0	5.43e-31	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides. It is involved in the biological process described with ATP-dependent chromatin remodeling	N/A
PADLOC	UHGV-0001283_13	ZorD1_00007	114.0	1.4e-33	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0001283_13	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0001283_13	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0001283_13	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0001283_13	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_14	phrog_1233	47.0	0.00000000000038	N/A	unknown function
structural_annotation	UHGV-0001283_14	PF13058	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001283_15	UniRef90_A0A8D9PDZ3	247.0	0	Holliday junction resolvase	N/A
structural_annotation	UHGV-0001283_15	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_17	phrog_20016	109.5	1.8e-32	N/A	unknown function
UniRef90	UHGV-0001283_17	UniRef90_A0A345BPX4	81.3	5.61e-17	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0001283_17	1235790.C805_00062	80.5	1.88e-17	N/A	N/A
structural_annotation	UHGV-0001283_17	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_18	phrog_16490	49.1	3.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0001283_18	1408437.JNJN01000043_gene803	108.0	2.86e-26	N/A	N/A
PHROG	UHGV-0001283_20	phrog_21718	40.4	0.000000000051	N/A	unknown function
UniRef90	UHGV-0001283_20	UniRef90_A0A8D9PDT7	163.0	0	Membrane fusogenic activity protein	N/A
UniRef90	UHGV-0001283_21	UniRef90_A0A8D9PDT6	138.0	5.99994e-41	Transcriptional regulatory protein	N/A
UniRef90	UHGV-0001283_22	UniRef90_A0A8D9PDZ2	100.0	1.82e-25	Insulin receptor	N/A
PHROG	UHGV-0001283_24	phrog_4105	63.9	2.5e-18	N/A	unknown function
KOfam	UHGV-0001283_25	K01448	62.3	7.9e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0001283_25	phrog_435	98.5	8.8e-29	endolysin	lysis
UniRef90	UHGV-0001283_25	UniRef90_A0A351MWN4	306.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0001283_25	994573.T472_0210960	139.0	4.42e-38	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0001283_25	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0001283_25	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0001283_25	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0001283_25	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_26	phrog_1129	68.9	5.1e-20	holin	lysis
UniRef90	UHGV-0001283_26	UniRef90_R5D220	123.0	8.48e-35	Putative holin	N/A
eggNOG-mapper	UHGV-0001283_26	693746.OBV_13280	107.0	1.62e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0001283_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0001283_26	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_27	phrog_372	233.0	0	tail protein	tail
UniRef90	UHGV-0001283_27	UniRef90_A0A3E3E6C0	189.0	0	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0001283_27	764299.STRIC_1425	132.0	4.07e-31	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0001283_27	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0001283_27	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0001283_27	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_28	phrog_6616	216.9	0	tail protein	tail
UniRef90	UHGV-0001283_28	UniRef90_A0A2Y9BMC1	114.0	1.47e-22	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0001283_28	1121333.JMLH01000047_gene1007	93.2	1.03e-16	N/A	N/A
structural_annotation	UHGV-0001283_28	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_29	phrog_1194	74.4	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0001283_29	1123263.AUKY01000051_gene1070	65.5	0.00000000000583	N/A	N/A
PHROG	UHGV-0001283_30	phrog_1535	124.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0001283_30	UniRef90_A0A8D9PDW4	770.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0001283_30	428127.EUBDOL_01563	186.0	7.00649e-45	homoserine transmembrane transporter activity	N/A
COG	UHGV-0001283_30	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0001283_30	PF08919	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001283_32	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_33	phrog_1407	64.7	1.5e-18	major tail protein	tail
UniRef90	UHGV-0001283_33	UniRef90_A0A8D9UH75	210.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0001283_33	997346.HMPREF9374_2640	55.5	0.000000107	Phage tail tube protein	N/A
Pfam	UHGV-0001283_33	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-0001283_33	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0001283_33	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0001283_34	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0001283_34	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-0001283_35	UniRef90_A0A8D9PDS5	126.0	5.58e-35	Minor capsid protein	N/A
structural_annotation	UHGV-0001283_35	PF11114,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0001283_36	PF10665,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_37	phrog_477	53.3	0.0000000000000044	head-tail adaptor Ad1	connector
UniRef90	UHGV-0001283_37	UniRef90_A0A8D9UHB0	231.0	0	Putative head tail connector protein	N/A
Pfam	UHGV-0001283_37	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
structural_annotation	UHGV-0001283_37	PF20557	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_39	phrog_247	256.3	0	major head protein	head and packaging
UniRef90	UHGV-0001283_39	UniRef90_A0A3D0LY55	365.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0001283_39	1304866.K413DRAFT_3038	322.0	0	N/A	N/A
Pfam	UHGV-0001283_39	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0001283_39	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0001283_40	phrog_194	57.5	2.5e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0001283_40	UniRef90_A0A8D9PDR7	291.0	0	Minor structural protein	N/A
Pfam	UHGV-0001283_40	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0001283_40	PF06810	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0001283	Yes	29,050	47	65	1