vOTU vOTU-135661

vOTU: vOTU-135661

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-135661
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00560 → vGENUS-01330 → vOTU-135661
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1932892
Biosample ID	N/A
Genome length (bp)	34,848 bps
CheckV completeness	87.97% (Medium-quality)
CDS count	57
CDS density	91.49%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella sp005845265	Total connections	101	Host agreement	84.16
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella	Total connections	14	Host agreement	85.71

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1932892_7	610130.Closa_1382	47.0	0.00000188	N/A	N/A
structural_annotation	UHGV-1932892_7	PF21744,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_10	K15773	44.5	0.000000000003	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-1932892_10	phrog_8	41.5	0.000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-1932892_10	UniRef90_UPI001A9B026E	122.0	2.49e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1932892_10	1469948.JPNB01000001_gene2110	48.9	0.00000164	N/A	N/A
Pfam	UHGV-1932892_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1932892_10	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1932892_10	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1932892_11	PF11132,NF007981	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1932892_13	PF14192	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_14	K03733	229.1	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1932892_14	phrog_1	157.9	0	integrase	integration and excision
UniRef90	UHGV-1932892_14	UniRef90_A0A174KY08	701.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1932892_14	742740.HMPREF9474_04312	196.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1932892_14	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1932892_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1932892_14	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1932892_14	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_15	phrog_36	50.2	0.000000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-1932892_15	UniRef90_A0A174KVR7	182.0	0	ECF subfamily RNA polymerase sigma-24 subunit	N/A
eggNOG-mapper	UHGV-1932892_15	411468.CLOSCI_00296	84.0	1.67e-18	N/A	N/A
structural_annotation	UHGV-1932892_15	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_16	K07474	125.2	8.1e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1932892_16	phrog_2606	342.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1932892_16	UniRef90_A0A413WS57	523.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1932892_16	478749.BRYFOR_07604	345.0	0	terminase, small subunit	N/A
Pfam	UHGV-1932892_16	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1932892_16	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1932892_16	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1932892_16	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_17	K06909	230.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1932892_17	phrog_2	111.3	1.4e-32	terminase large subunit	head and packaging
UniRef90	UHGV-1932892_17	UniRef90_A0A413WS60	938.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1932892_17	411461.DORFOR_00750	690.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-1932892_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1932892_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1932892_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1932892_17	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_18	phrog_533	406.1	0	portal protein	head and packaging
UniRef90	UHGV-1932892_18	UniRef90_A0A413WS59	939.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1932892_18	1321782.HMPREF1986_02262	611.0	0	N/A	N/A
Pfam	UHGV-1932892_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1932892_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_19	phrog_581	318.0	0	minor head protein	head and packaging
UniRef90	UHGV-1932892_19	UniRef90_A0A413LD45	671.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1932892_19	658655.HMPREF0988_02563	437.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1932892_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1932892_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1932892_19	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_20	K07584	61.8	1.4e-17	N/A	N/A
PHROG	UHGV-1932892_20	phrog_4478	84.5	8.2e-25	peptidase	other
UniRef90	UHGV-1932892_20	UniRef90_A0A413LD50	193.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1932892_20	1235792.C808_02458	97.8	1.98e-25	Pfam:Peptidase_C108	N/A
Pfam	UHGV-1932892_20	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1932892_20	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1932892_20	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_21	phrog_2303	116.1	3.3e-34	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1932892_21	1235792.C808_05367	157.0	0	N/A	N/A
PHROG	UHGV-1932892_22	phrog_10	178.1	0	major head protein	head and packaging
UniRef90	UHGV-1932892_22	UniRef90_A0A413LD51	628.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1932892_22	411461.DORFOR_00744	500.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-1932892_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1932892_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1932892_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1932892_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1932892_23	UniRef90_A0A173UTP1	79.0	4.76e-17	Head fiber protein	N/A
Pfam	UHGV-1932892_23	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
PHROG	UHGV-1932892_24	phrog_541	96.8	1.7e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1932892_24	411461.DORFOR_00743	167.0	0	N/A	N/A
PHROG	UHGV-1932892_25	phrog_3366	127.2	8.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-1932892_25	742765.HMPREF9457_02129	130.0	4.38e-37	N/A	N/A
Pfam	UHGV-1932892_25	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1932892_25	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_26	phrog_556	136.9	5.49996e-41	minor head protein	head and packaging
UniRef90	UHGV-1932892_26	UniRef90_UPI00093128B4	164.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1932892_26	411462.DORLON_00783	171.0	0	N/A	N/A
Pfam	UHGV-1932892_26	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1932892_26	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_27	phrog_3266	137.2	5.79997e-41	tail completion	connector
eggNOG-mapper	UHGV-1932892_27	411461.DORFOR_00740	148.0	5.04467e-44	N/A	N/A
structural_annotation	UHGV-1932892_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_28	phrog_3099	156.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1932892_28	411468.CLOSCI_02404	183.0	0	N/A	N/A
Pfam	UHGV-1932892_28	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1932892_28	PF06199,PF18316,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_29	phrog_4450	104.8	5.8e-31	N/A	unknown function
UniRef90	UHGV-1932892_29	UniRef90_A0A6B4MAH9	67.0	0.0000000000059	AP endonuclease	N/A
eggNOG-mapper	UHGV-1932892_29	641112.ACOK01000073_gene2902	93.2	1.32e-22	N/A	N/A
Pfam	UHGV-1932892_29	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1932892_29	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_30	phrog_706	147.0	9.24857e-44	N/A	unknown function
UniRef90	UHGV-1932892_30	UniRef90_UPI001BC82BDD	153.0	9.52883e-44	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1932892_30	658655.HMPREF0988_02553	147.0	3.10948e-42	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1932892_30	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1932892_30	PF06854	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1932892_31	411461.DORFOR_00736	78.2	6.01e-19	N/A	N/A
structural_annotation	UHGV-1932892_31	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_32	phrog_6900	255.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1932892_32	658655.HMPREF0988_02552	315.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1932892_32	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_33	phrog_33	81.0	2.2e-23	distal tail protein Dit	tail
UniRef90	UHGV-1932892_33	UniRef90_A0A413WS74	470.0	0	MtfA protein	N/A
eggNOG-mapper	UHGV-1932892_33	411490.ANACAC_00709	198.0	0	phage tail	N/A
Pfam	UHGV-1932892_33	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1932892_33	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1932892_33	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1932892_33	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_34	phrog_3558	379.3	0	tail protein	tail
UniRef90	UHGV-1932892_34	UniRef90_A0A413LD37	1301.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1932892_34	610130.Closa_0754	509.0	0	N/A	N/A
Pfam	UHGV-1932892_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1932892_34	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1932892_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1932892_34	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_36	phrog_21765	44.9	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1932892_36	1304866.K413DRAFT_1240	92.0	8.2e-21	N/A	N/A
PHROG	UHGV-1932892_37	phrog_16164	50.6	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1932892_37	742733.HMPREF9469_01804	99.8	2.18e-24	N/A	N/A
PHROG	UHGV-1932892_38	phrog_38707	93.2	2.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1932892_38	478749.BRYFOR_07557	260.0	0	tail collar domain protein	N/A
COG	UHGV-1932892_38	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1932892_40	phrog_30004	52.3	9.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-1932892_40	610130.Closa_0759	160.0	2.56438e-43	N/A	N/A
eggNOG-mapper	UHGV-1932892_42	742740.HMPREF9474_04291	140.0	3.69004e-41	N/A	N/A
structural_annotation	UHGV-1932892_43	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_44	phrog_1009	48.0	0.00000000000019	N/A	unknown function
UniRef90	UHGV-1932892_44	UniRef90_A0A3E2WI44	157.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-1932892_44	742740.HMPREF9474_03521	145.0	2.38221e-44	N/A	N/A
PHROG	UHGV-1932892_45	phrog_1129	66.8	2.4e-19	holin	lysis
UniRef90	UHGV-1932892_45	UniRef90_A0A2N0KEV2	145.0	8.12753e-44	Enolase	N/A
eggNOG-mapper	UHGV-1932892_45	742740.HMPREF9474_03522	140.0	1.3004e-42	N/A	N/A
Pfam	UHGV-1932892_45	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1932892_45	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1932892_46	K00689	44.3	0.00000000000058	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1932892_46	phrog_38078	77.6	2e-22	N/A	unknown function
UniRef90	UHGV-1932892_46	UniRef90_A0A174XEM4	456.0	0	Cell wall binding repeat-containing protein	N/A
eggNOG-mapper	UHGV-1932892_46	1304866.K413DRAFT_1245	365.0	0	Putative cell wall binding repeat	N/A
Pfam	UHGV-1932892_46	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
Pfam	UHGV-1932892_46	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1932892_46	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1932892_46	PF19127,PF05382,MF_00727,TIGR04035,NF033742,COG5263	N/A	N/A	N/A	N/A
UniRef90	UHGV-1932892_47	UniRef90_A0A174XWS3	120.0	3.35e-33	Bacterial regulatory proteins, luxR family	N/A
eggNOG-mapper	UHGV-1932892_47	1042156.CXIVA_25310	67.8	0.00000000000817	Plasmid pRiA4b ORF-3-like protein	N/A
structural_annotation	UHGV-1932892_47	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1932892_48	UniRef90_UPI00067831C8	71.2	0.00000000000875	LuxR C-terminal-related transcriptional regulator	N/A
Pfam	UHGV-1932892_48	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-1932892_48	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-1932892_48	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
UniRef90	UHGV-1932892_50	UniRef90_N9YMZ1	157.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1932892_50	411470.RUMGNA_03786	62.0	0.0000000000973	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1932892_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1932892_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1932892_50	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1932892_52	UniRef90_A0A374PA49	107.0	1.7e-29	GNAT family acetyltransferase	N/A
KOfam	UHGV-1932892_53	K06400	255.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1932892_53	phrog_95	263.5	0	integrase	integration and excision
UniRef90	UHGV-1932892_53	UniRef90_D3AFE7	944.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1932892_53	1298920.KI911353_gene3266	634.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1932892_53	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1932892_53	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1932892_53	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1932892_53	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1932892_53	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_54	phrog_87	51.3	0.0000000000000083	metallo-protease	other
UniRef90	UHGV-1932892_54	UniRef90_UPI001C01403F	437.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1932892_54	742733.HMPREF9469_01856	243.0	0	N/A	N/A
Pfam	UHGV-1932892_54	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1932892_54	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_55	phrog_8	59.3	9.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1932892_55	UniRef90_G5HGT6	217.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1932892_55	742733.HMPREF9469_01855	217.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1932892_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1932892_55	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1932892_55	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1932892_56	phrog_8	47.9	0.00000000000031	transcriptional regulator	transcription regulation
UniRef90	UHGV-1932892_56	UniRef90_UPI001C02AD9F	127.0	2.99e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1932892_56	476272.RUMHYD_02827	89.7	4.9e-23	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1932892_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1932892_56	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1932892_56	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1932892	Yes	34,848	45	88	1