vOTU vOTU-136151

vOTU: vOTU-136151

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-136151
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00172 → vGENUS-00333 → vOTU-136151
Host lineage	Bacteria → Bacteroidota
Host range breadth	Phylum
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0107365
Biosample ID	SAMEA3708822
Genome length (bp)	33,181 bps
CheckV completeness	74.01% (Medium-quality)
CDS count	64
CDS density	88.13%
tRNA count	3
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Bacteroidota	Total connections	494	Host agreement	58.91
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia hominis	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0107365_1	phrog_8680	227.5	0	N/A	unknown function
UniRef90	UHGV-0107365_1	UniRef90_A0A412EKN2	391.0	0	N/A	N/A
eggNOG-mapper	UHGV-0107365_1	411470.RUMGNA_02208	271.0	0	N/A	N/A
Pfam	UHGV-0107365_1	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0107365_1	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_2	phrog_18218	138.5	1.79997e-41	N/A	unknown function
UniRef90	UHGV-0107365_2	UniRef90_A0A8D9PGR5	154.0	0	Holin	N/A
eggNOG-mapper	UHGV-0107365_2	411902.CLOBOL_03424	82.4	6.07e-19	N/A	N/A
structural_annotation	UHGV-0107365_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_3	phrog_355	57.2	3.1e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107365_3	UniRef90_A0A415G5B2	150.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0107365_3	397290.C810_05229	139.0	1.29004e-41	N/A	N/A
Pfam	UHGV-0107365_3	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0107365_3	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_4	phrog_28328	91.0	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0107365_4	428125.CLOLEP_01381	49.3	0.00000152	N/A	N/A
PHROG	UHGV-0107365_5	phrog_541	96.9	1.3e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0107365_5	476272.RUMHYD_01778	114.0	3.12e-30	N/A	N/A
PHROG	UHGV-0107365_6	phrog_247	222.1	0	major head protein	head and packaging
UniRef90	UHGV-0107365_6	UniRef90_UPI001BA5448B	288.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0107365_6	33035.JPJF01000106_gene3132	561.0	0	N/A	N/A
structural_annotation	UHGV-0107365_6	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0107365_7	UniRef90_UPI001C0EBA51	278.0	0	phage scaffolding protein	N/A
structural_annotation	UHGV-0107365_9	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_10	phrog_20016	70.7	1.8e-20	N/A	unknown function
UniRef90	UHGV-0107365_10	UniRef90_A0A316MV88	219.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0107365_10	1226322.HMPREF1545_00077	67.0	0.00000000000388	N/A	N/A
structural_annotation	UHGV-0107365_10	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0107365_12	476272.RUMHYD_01770	84.7	3.21e-17	N/A	N/A
PHROG	UHGV-0107365_14	phrog_21718	70.3	3.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0107365_14	1235790.C805_00058	100.0	7.11e-25	N/A	N/A
eggNOG-mapper	UHGV-0107365_16	1394176.AWUO01000014_gene642	56.6	0.00000000931	N/A	N/A
UniRef90	UHGV-0107365_17	UniRef90_R5GBY4	90.5	1.56e-22	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0107365_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0107365_17	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0107365_19	UniRef90_A0A417UWY7	125.0	2.59e-35	CTP synthase	N/A
eggNOG-mapper	UHGV-0107365_19	476272.RUMHYD_01766	69.7	0.0000000000000461	N/A	N/A
PHROG	UHGV-0107365_20	phrog_581	265.1	0	minor head protein	head and packaging
UniRef90	UHGV-0107365_20	UniRef90_A0A1C6CDG2	726.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0107365_20	33035.JPJF01000106_gene3134	436.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0107365_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0107365_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0107365_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_21	phrog_374	203.2	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107365_21	UniRef90_C9KJA8	172.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0107365_21	742767.HMPREF9456_02044	188.0	0	N/A	N/A
structural_annotation	UHGV-0107365_21	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_22	phrog_533	274.3	0	portal protein	head and packaging
UniRef90	UHGV-0107365_22	UniRef90_A0A1C6CDM8	875.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0107365_22	33035.JPJF01000106_gene3135	506.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0107365_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0107365_23	K06909	414.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0107365_23	phrog_3717	168.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0107365_23	UniRef90_A0A1C6CDG5	1066.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0107365_23	33035.JPJF01000106_gene3136	735.0	0	Terminase small subunit	N/A
Pfam	UHGV-0107365_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0107365_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0107365_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0107365_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0107365_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0107365_23	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0107365_24	445972.ANACOL_01837	54.3	0.0000000114	N/A	N/A
PHROG	UHGV-0107365_25	phrog_33130	123.2	6.2e-37	N/A	unknown function
UniRef90	UHGV-0107365_25	UniRef90_A0A3B9CD52	68.9	0.000000000000191	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0107365_25	PF10922,MF_00839	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0107365_26	cluster_11486	111.0	1.97e-34	NA	N/A
UniRef90	UHGV-0107365_27	UniRef90_R6DRH1	108.0	8.03e-26	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-0107365_27	742738.HMPREF9460_00886	107.0	1.37e-26	N/A	N/A
Pfam	UHGV-0107365_27	PF07191	N/A	N/A	zinc-ribbons	zinc-ribbons_6
structural_annotation	UHGV-0107365_27	PF12167,PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_28	phrog_13890	53.1	0.0000000000000045	N/A	unknown function
UniRef90	UHGV-0107365_28	UniRef90_A0A841T7Y7	50.1	0.000000971	Transcriptional regulator	N/A
structural_annotation	UHGV-0107365_28	PF01402,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_29	phrog_1271	40.4	0.000000000074	HNH endonuclease	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0107365_29	PF09889	N/A	N/A	N/A	DUF2116
COG	UHGV-0107365_29	COG2771	N/A	N/A	DNA-binding transcriptional regulator, CsgD family	N/A
KOfam	UHGV-0107365_33	K04763	178.7	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0107365_33	phrog_1	154.4	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-0107365_33	UniRef90_UPI001D14C144	405.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0107365_33	1298920.KI911353_gene2699	335.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0107365_33	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0107365_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0107365_33	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0107365_33	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0107365_34	K00390	89.2	3.8e-26	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0107365_34	phrog_424	111.6	6.9e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0107365_34	UniRef90_R5G2U2	555.0	0	Adenylylsulfate reductase thioredoxin dependent	N/A
eggNOG-mapper	UHGV-0107365_34	411490.ANACAC_02386	355.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0107365_34	BrxP_00001	68.4	4.6e-20	BrxP	BREX
Pfam	UHGV-0107365_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0107365_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0107365_34	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0107365_36	411473.RUMCAL_02525	114.0	9.75e-32	N/A	N/A
PHROG	UHGV-0107365_39	phrog_757	124.6	6.7e-37	DNA methyltransferase	other
UniRef90	UHGV-0107365_39	UniRef90_A0A349YFI2	177.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0107365_39	1095750.HMPREF9970_0173	188.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0107365_39	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0107365_40	phrog_757	48.4	0.00000000000015	DNA methyltransferase	other
UniRef90	UHGV-0107365_40	UniRef90_A0A7J2R6L5	72.0	0.0000000000000013	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0107365_40	748224.HMPREF9436_03069	94.7	1.93e-23	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0107365_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0107365_42	PF09870,COG4466	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_44	phrog_16304	146.1	2.70451e-43	N/A	unknown function
UniRef90	UHGV-0107365_44	UniRef90_A0A1C6CBN6	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0107365_44	411490.ANACAC_00800	135.0	8.8e-36	N/A	N/A
Pfam	UHGV-0107365_44	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0107365_44	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_45	phrog_244	66.5	5.5e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0107365_45	742740.HMPREF9474_03491	181.0	0	N/A	N/A
structural_annotation	UHGV-0107365_45	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_46	phrog_2113	52.2	0.0000000000000085	N/A	unknown function
structural_annotation	UHGV-0107365_46	PF21715,TIGR04176,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_48	phrog_7566	86.6	2e-25	N/A	unknown function
UniRef90	UHGV-0107365_48	UniRef90_A0A417GG52	137.0	2.2e-40	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0107365_48	1304866.K413DRAFT_1198	50.1	0.00000137	N/A	N/A
PHROG	UHGV-0107365_49	phrog_72	51.0	0.000000000000017	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0107365_49	411490.ANACAC_00804	134.0	2.83e-37	N/A	N/A
structural_annotation	UHGV-0107365_49	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0107365_50	phrog_155	124.5	8.5e-37	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0107365_50	UniRef90_A0A1C6CBK6	266.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0107365_50	1304866.K413DRAFT_1196	227.0	0	ERF superfamily	N/A
Pfam	UHGV-0107365_50	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0107365_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0107365_50	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0107365_53	UniRef90_UPI001BC23C38	76.6	4.61e-16	Nitrogenase molybdenum-iron protein subunit beta	N/A
PHROG	UHGV-0107365_54	phrog_5070	179.5	0	N/A	unknown function
UniRef90	UHGV-0107365_54	UniRef90_A0A3A9AGI5	114.0	3.11e-28	Polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0107365_54	768710.DesyoDRAFT_1067	138.0	1.76e-38	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-0107365_54	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-0107365_54	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
AcrCatalog	UHGV-0107365_56	cluster_17974	58.9	0.00000000000000238	NA	N/A
structural_annotation	UHGV-0107365_59	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0107365_60	K18830	46.7	0.00000000000069	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0107365_60	phrog_8	45.2	0.0000000000007	transcriptional regulator	transcription regulation
UniRef90	UHGV-0107365_60	UniRef90_A0A1C6HZ25	112.0	9.46e-30	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0107365_60	445972.ANACOL_03315	110.0	1.18e-29	N/A	N/A
Pfam	UHGV-0107365_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0107365_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0107365_60	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0107365_62	1408311.JNJM01000013_gene2316	201.0	0	N/A	N/A
UniRef90	UHGV-0107365_63	UniRef90_UPI00098874B1	110.0	4.06e-29	N/A	N/A
eggNOG-mapper	UHGV-0107365_63	257314.LJ_1744	102.0	5.71e-27	N/A	N/A
Pfam	UHGV-0107365_63	PF05987	N/A	N/A	N/A	DUF898
COG	UHGV-0107365_63	COG4269	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0107365_63	PF20403	N/A	N/A	N/A	N/A
KOfam	UHGV-0107365_64	K14059	143.0	3.99931e-42	int; integrase	N/A
PHROG	UHGV-0107365_64	phrog_1	139.2	4.19997e-41	integrase	integration and excision
UniRef90	UHGV-0107365_64	UniRef90_A0A417H3Q5	499.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0107365_64	1304866.K413DRAFT_1180	391.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0107365_64	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0107365_64	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0107365_64	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0107365	Yes	33,181	47	74	1