vOTU vOTU-136585

vOTU: vOTU-136585

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-136585
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00077 → vGENUS-00252 → vOTU-136585
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0187480
Biosample ID	SAMN09781764
Genome length (bp)	33,792 bps
CheckV completeness	88.58% (Medium-quality)
CDS count	54
CDS density	93.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	82	Host agreement	97.56
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0187480_1	phrog_144	93.5	2e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_1	UniRef90_UPI001EDE5545	175.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0187480_1	693746.OBV_19960	162.0	0	HNH endonuclease	N/A
Pfam	UHGV-0187480_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0187480_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0187480_1	PF01844,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_2	UniRef90_UPI001F232519	83.6	7.58e-20	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_2	1226322.HMPREF1545_00110	96.7	8.07e-26	Cysteine-rich KTR	N/A
Pfam	UHGV-0187480_2	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0187480_2	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_3	phrog_3584	74.3	1.6e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0187480_3	693746.OBV_19950	320.0	0	N/A	N/A
structural_annotation	UHGV-0187480_3	PF05840	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_5	phrog_38832	79.0	4.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0187480_5	665956.HMPREF1032_00143	72.8	0.0000000000000929	N/A	N/A
KOfam	UHGV-0187480_7	K17398	86.5	5.6e-38	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-0187480_7	phrog_17284	112.6	0	N/A	unknown function
UniRef90	UHGV-0187480_7	UniRef90_UPI001EDDC2F3	692.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0187480_7	1235797.C816_01614	452.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0187480_7	MTase_II_00147	40.3	0.0000000000038	Type II methyltransferase	RM
Pfam	UHGV-0187480_7	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0187480_7	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0187480_7	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_9	UniRef90_A0A845MZZ9	115.0	1.48e-30	N/A	N/A
Pfam	UHGV-0187480_9	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0187480_10	K03111	137.4	1.6e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0187480_10	phrog_44	134.7	6.50001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_10	UniRef90_UPI001C02B0E9	250.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0187480_10	693746.OBV_12860	197.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0187480_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0187480_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0187480_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0187480_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0187480_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_13	K03497	66.8	5.5e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0187480_13	phrog_27290	447.6	0	N/A	unknown function
UniRef90	UHGV-0187480_13	UniRef90_UPI001C029D7C	803.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_13	742738.HMPREF9460_00856	326.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0187480_13	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0187480_13	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0187480_13	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_14	K03496	213.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0187480_14	phrog_164	176.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_14	UniRef90_UPI001BB48231	286.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0187480_14	693746.OBV_19850	228.0	0	Anion-transporting ATPase	N/A
Pfam	UHGV-0187480_14	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0187480_14	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0187480_14	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_16	K02314	343.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0187480_16	phrog_19	281.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_16	UniRef90_UPI001C0112E5	287.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0187480_16	742738.HMPREF9460_00852	262.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0187480_16	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0187480_16	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0187480_16	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0187480_16	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_17	phrog_270	94.2	1.9e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_17	UniRef90_UPI001ADEF5BC	181.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_17	742738.HMPREF9460_00851	166.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0187480_17	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0187480_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0187480_17	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_18	phrog_6499	139.5	8.80015e-42	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187480_18	UniRef90_UPI001C01DF91	147.0	1.6e-41	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0187480_18	1226322.HMPREF1545_00092	130.0	1.47e-35	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0187480_18	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0187480_18	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0187480_18	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187480_19	PF12728,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_20	K07729	63.3	5.7e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0187480_20	phrog_8	50.1	0.000000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187480_20	UniRef90_UPI00030EB95F	70.1	0.0000000000000162	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_20	1007096.BAGW01000011_gene2356	70.1	0.00000000000000272	sequence-specific DNA binding	N/A
Pfam	UHGV-0187480_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0187480_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0187480_20	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_21	K22300	40.0	0.000000000077	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0187480_21	UniRef90_G4L1F8	110.0	5.49e-29	Putative Xre family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0187480_21	693746.OBV_19770	110.0	9.21e-30	sequence-specific DNA binding	N/A
COG	UHGV-0187480_21	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0187480_21	PF12844,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_23	K02342	184.2	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0187480_23	phrog_192	161.4	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187480_23	UniRef90_A0A8J6JKY8	328.0	0	Ribonuclease H-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_23	537013.CLOSTMETH_02498	280.0	0	EXOIII	N/A
PADLOC	UHGV-0187480_23	cd06127	141.7	5.59959e-42	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0187480_23	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0187480_23	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0187480_23	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0187480_23	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0187480_23	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_24	UniRef90_A0A8D9UHA6	89.0	2.87e-19	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0187480_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0187480_24	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0187480_24	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_25	K14059	207.1	0	int; integrase	N/A
PHROG	UHGV-0187480_25	phrog_1	213.7	0	integrase	integration and excision
UniRef90	UHGV-0187480_25	UniRef90_A0A1H8A220	275.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0187480_25	693746.OBV_01970	191.0	0	Phage integrase family	N/A
Pfam	UHGV-0187480_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0187480_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0187480_25	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_26	UniRef90_A0A7M1RS47	64.7	0.000000000377	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0187480_26	1378168.N510_03079	64.3	0.000000000454	N/A	N/A
structural_annotation	UHGV-0187480_28	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_29	phrog_16490	40.1	0.000000000049	N/A	unknown function
KOfam	UHGV-0187480_33	K23779	40.2	0.000000000069	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-0187480_33	UniRef90_UPI001D009076	149.0	2.21405e-43	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187480_33	742738.HMPREF9460_04059	146.0	6.09565e-43	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0187480_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0187480_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0187480_33	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187480_34	742738.HMPREF9460_04058	106.0	1.72e-25	N/A	N/A
structural_annotation	UHGV-0187480_35	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_36	K10062	105.9	2.5e-31	COLEC12; collectin sub-family member 12	N/A
PHROG	UHGV-0187480_36	phrog_6320	140.6	1.19993e-41	tail fiber protein	tail
Pfam	UHGV-0187480_36	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0187480_37	PF12245	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_38	K08640	99.9	4.3e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0187480_38	phrog_894	101.9	7.7e-30	endolysin	lysis
UniRef90	UHGV-0187480_38	UniRef90_K1TJK4	223.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0187480_38	1235797.C816_04171	196.0	0	Peptidase M15	N/A
Pfam	UHGV-0187480_38	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0187480_38	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187480_38	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_39	phrog_18955	60.1	2.3e-17	N/A	unknown function
UniRef90	UHGV-0187480_39	UniRef90_UPI00164D2830	373.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-0187480_39	696369.KI912183_gene2044	57.8	0.000000519	exopolysaccharide biosynthesis protein	N/A
Pfam	UHGV-0187480_39	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0187480_39	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-0187480_39	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_41	phrog_13256	72.1	4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0187480_41	1226322.HMPREF1545_00132	70.5	0.00000000000000272	N/A	N/A
PHROG	UHGV-0187480_42	phrog_4105	75.3	7.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0187480_42	428125.CLOLEP_01431	54.3	0.0000000473	N/A	N/A
PHROG	UHGV-0187480_43	phrog_3904	77.5	8.5e-23	tail fiber protein	tail
eggNOG-mapper	UHGV-0187480_43	1226322.HMPREF1545_00064	68.2	0.00000000223	N/A	N/A
PHROG	UHGV-0187480_44	phrog_32744	533.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0187480_44	1120998.AUFC01000030_gene2247	209.0	0	N/A	N/A
structural_annotation	UHGV-0187480_44	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_46	phrog_23464	191.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0187480_46	1232452.BAIB02000007_gene1616	194.0	0	phage tail tape measure protein	N/A
COG	UHGV-0187480_46	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0187480_46	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_48	phrog_88	50.8	0.000000000000032	major tail protein	tail
UniRef90	UHGV-0187480_48	UniRef90_R5EB96	192.0	0	Phage major tail protein phi13 family	N/A
structural_annotation	UHGV-0187480_48	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_49	UniRef90_R5IIS5	97.4	3.16e-23	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0187480_49	1203606.HMPREF1526_00974	83.2	1.98e-18	N/A	N/A
structural_annotation	UHGV-0187480_49	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_50	UniRef90_A0A4S2AEF8	57.0	0.0000000421	Phage tail protein	N/A
eggNOG-mapper	UHGV-0187480_50	1203606.HMPREF1526_00975	73.6	0.00000000000000242	N/A	N/A
structural_annotation	UHGV-0187480_50	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_51	phrog_25	52.7	0.0000000000000078	head closure Hc1	connector
UniRef90	UHGV-0187480_51	UniRef90_UPI001898DBDF	101.0	1.48e-25	phage head closure protein	N/A
Pfam	UHGV-0187480_51	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0187480_51	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0187480_51	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0187480_51	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187480_52	UniRef90_UPI0010315EA4	111.0	1.04e-29	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0187480_52	742738.HMPREF9460_00878	107.0	1.2e-28	N/A	N/A
NCBIFam	UHGV-0187480_52	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0187480_52	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0187480_53	phrog_10	90.8	1.9e-26	major head protein	head and packaging
UniRef90	UHGV-0187480_53	UniRef90_UPI000B37FFEF	484.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0187480_53	411902.CLOBOL_03879	121.0	6.67e-28	Phage capsid family	N/A
Pfam	UHGV-0187480_53	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0187480_53	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0187480_53	PF05065,PF14182,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0187480_54	K01358	102.0	8.2e-30	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0187480_54	phrog_94	182.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0187480_54	UniRef90_UPI00124513AA	286.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0187480_54	557436.Lreu_1115	135.0	5.95e-36	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0187480_54	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0187480_54	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0187480_54	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0187480	Yes	33,792	59	89	1