vOTU vOTU-136765

vOTU: vOTU-136765

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-136765
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli
Taxonomy (UHGV)	vFAM-00037 → vSUBFAM-00415 → vGENUS-00268 → vOTU-136765
Host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0040082
Biosample ID	SAMEA4969121
Genome length (bp)	33,970 bps
CheckV completeness	63.11% (Medium-quality)
CDS count	53
CDS density	91.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	Total connections	12	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0040082_1	phrog_791	136.2	2.1e-40	N/A	unknown function
UniRef90	UHGV-0040082_1	UniRef90_UPI0010936B92	267.0	0	N/A	N/A
eggNOG-mapper	UHGV-0040082_1	1147140.H6WRU2_9CAUD	113.0	2.18e-29	N/A	N/A
Pfam	UHGV-0040082_1	PF19759	N/A	N/A	N/A	DUF6246
PHROG	UHGV-0040082_4	phrog_1538	427.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0040082_4	UniRef90_UPI0010CC55C1	1278.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0040082_4	1168549.I6S1R4_9CAUD	297.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0040082_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0040082_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0040082_4	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_6	phrog_99	128.1	6.6e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_6	UniRef90_UPI0010AD8AC0	353.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0040082_6	889338.G3BLM8_9CAUD	85.5	1.6e-18	sequence-specific DNA binding transcription factor activity	N/A
Pfam	UHGV-0040082_6	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0040082_6	PF13392,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_7	phrog_1525	61.1	1.7e-17	N/A	unknown function
PHROG	UHGV-0040082_8	phrog_29810	125.0	1.9e-37	N/A	unknown function
PHROG	UHGV-0040082_9	phrog_14	83.5	2.9e-24	minor tail protein	tail
UniRef90	UHGV-0040082_9	UniRef90_V0A918	228.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-0040082_9	101570.Q5G8W6_9CAUD	159.0	0	Phage minor tail protein	N/A
Pfam	UHGV-0040082_9	PF05939	N/A	N/A	Phage minor tail protein	Phage_min_tail
structural_annotation	UHGV-0040082_9	PF05939,TIGR02217,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_10	phrog_3249	61.1	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0040082_10	1141140.K4FCE0_9CAUD	54.7	0.00000000249	N/A	N/A
PHROG	UHGV-0040082_11	phrog_5689	80.0	2.4e-23	N/A	unknown function
UniRef90	UHGV-0040082_11	UniRef90_A0A8E0MKK0	167.0	0	ANT domain-containing protein	N/A
Pfam	UHGV-0040082_11	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
PHROG	UHGV-0040082_12	phrog_38567	148.9	1.54143e-44	N/A	unknown function
PHROG	UHGV-0040082_13	phrog_29559	84.6	8e-25	N/A	unknown function
UniRef90	UHGV-0040082_13	UniRef90_UPI001C60BA91	96.7	1.75e-25	transporter	N/A
PHROG	UHGV-0040082_14	phrog_18	242.7	0	minor tail protein	tail
UniRef90	UHGV-0040082_14	UniRef90_V0A922	469.0	0	Phage minor tail protein L	N/A
eggNOG-mapper	UHGV-0040082_14	101570.Q5G8W3_9CAUD	354.0	0	Phage minor tail protein L	N/A
Pfam	UHGV-0040082_14	PF05100	N/A	N/A	Phage minor tail protein L	Phage_tail_L
NCBIFam	UHGV-0040082_14	TIGR01600.1	N/A	N/A	phage minor tail protein L	N/A
structural_annotation	UHGV-0040082_14	PF05100,TIGR01600,COG4672	N/A	N/A	N/A	N/A
KOfam	UHGV-0040082_15	K21140	54.9	0.0000000000000014	mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]	N/A
PHROG	UHGV-0040082_15	phrog_30	245.7	0	minor tail protein	tail
UniRef90	UHGV-0040082_15	UniRef90_V0ANQ7	495.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0040082_15	1115512.EH105704_01_02090	320.0	0	JAB/MPN domain	N/A
Pfam	UHGV-0040082_15	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0040082_15	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0040082_15	PF00877,TIGR02219,NF041370,COG0791,COG1310	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_16	phrog_32	92.4	2.3e-29	tail assembly protein	tail
UniRef90	UHGV-0040082_16	UniRef90_A0A4T6JV72	317.0	0	Tail assembly protein	N/A
eggNOG-mapper	UHGV-0040082_16	1147140.H6WRW3_9CAUD	204.0	0	virus tail assembly	N/A
structural_annotation	UHGV-0040082_16	PF06805,NF008347,COG4723	N/A	N/A	N/A	N/A
KOfam	UHGV-0040082_17	K16808	51.3	0.0000000000000041	NUMA1; nuclear mitotic apparatus protein 1	N/A
PHROG	UHGV-0040082_17	phrog_31	837.0	0	baseplate hub protein Tal	tail
UniRef90	UHGV-0040082_17	UniRef90_A0A8A5H3X6	2159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0040082_17	1168549.I6R9B3_9CAUD	1120.0	0	Putative phage tail protein	N/A
Pfam	UHGV-0040082_17	PF13550	N/A	N/A	Putative phage tail protein	Phage-tail_3
Pfam	UHGV-0040082_17	PF09327	N/A	N/A	N/A	DUF1983
structural_annotation	UHGV-0040082_17	PF13550,PF09327,PF16303,PF14879,PF03944,MF_04116,NF040662,NF038126,TIGR04183,COG4733	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_18	phrog_12984	93.4	1.4e-27	lipoprotein	other
UniRef90	UHGV-0040082_18	UniRef90_UPI000BB719DD	103.0	1.4e-27	membrane lipoprotein lipid attachment site-containing protein	N/A
eggNOG-mapper	UHGV-0040082_18	1540098.A0A0A0RVZ8_9CAUD	89.7	1.02e-22	N/A	N/A
PHROG	UHGV-0040082_19	phrog_24369	919.9	0	tail fiber protein	tail
UniRef90	UHGV-0040082_19	UniRef90_UPI001EDF7D93	1668.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0040082_19	10726.FIBL1_BPT5	699.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0040082_19	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0040082_20	NF037951	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_22	phrog_72	155.6	0	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_22	UniRef90_U9ZTE9	275.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0040082_22	911008.GLAD_00731	150.0	5.60519e-45	ninB family	N/A
Pfam	UHGV-0040082_22	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0040082_22	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_23	phrog_130	127.2	1.5e-37	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0040082_23	UniRef90_D8A1Z4	300.0	0	BRO family, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0040082_23	891974.E05_32530	128.0	4.08e-34	BRO family, N-terminal domain	N/A
Pfam	UHGV-0040082_23	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0040082_23	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-0040082_24	phrog_21123	42.8	0.0000000000077	N/A	unknown function
KOfam	UHGV-0040082_26	K02314	341.1	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0040082_26	phrog_19	362.6	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_26	UniRef90_A0A2X5PKT2	862.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0040082_26	1127357.I1TEG1_9CAUD	499.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0040082_26	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0040082_26	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-0040082_26	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_27	phrog_99	163.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_27	UniRef90_A0A346FE37	345.0	0	Putative HNH endonuclease	N/A
eggNOG-mapper	UHGV-0040082_27	1048207.F8UBV0_9CAUD	160.0	0	HNH endonuclease	N/A
Pfam	UHGV-0040082_27	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0040082_27	PF00847	N/A	N/A	AP2 domain	AP2
structural_annotation	UHGV-0040082_27	PF13392,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_28	phrog_704	475.0	0	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_28	UniRef90_A0A6B9X1J2	520.0	0	Putative phosphoesterase	N/A
eggNOG-mapper	UHGV-0040082_28	1315956.M9QWT5_9CAUD	518.0	0	hydrolase activity	N/A
structural_annotation	UHGV-0040082_28	PF12850,MF_00325,NF041030,COG1311	N/A	N/A	N/A	N/A
KOfam	UHGV-0040082_29	K07741	40.1	0.000000000097	antB; anti-repressor protein	N/A
PHROG	UHGV-0040082_29	phrog_130	159.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0040082_29	UniRef90_UPI001F0DE253	336.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0040082_29	891974.E05_32530	160.0	1.4013e-45	BRO family, N-terminal domain	N/A
Pfam	UHGV-0040082_29	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0040082_29	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0040082_29	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0040082_29	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0040082_31	K07741	81.9	1.8e-23	antB; anti-repressor protein	N/A
PHROG	UHGV-0040082_31	phrog_5817	109.1	4.9e-32	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0040082_31	UniRef90_UPI001BFE3B08	403.0	0	antA/AntB antirepressor family protein	N/A
eggNOG-mapper	UHGV-0040082_31	981336.F944_01674	88.6	2.94e-19	AntA/AntB antirepressor	N/A
Pfam	UHGV-0040082_31	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0040082_31	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
PHROG	UHGV-0040082_32	phrog_20981	194.6	0	N/A	unknown function
UniRef90	UHGV-0040082_32	UniRef90_UPI001F0CE2E9	572.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0040082_32	1080067.BAZH01000011_gene673	244.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0040082_32	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0040082_32	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
structural_annotation	UHGV-0040082_32	PF13730,MF_01909,NF040939,COG5529	N/A	N/A	N/A	N/A
UniRef90	UHGV-0040082_33	UniRef90_UPI000BBC4D3E	143.0	3.30706e-43	MarR family transcriptional regulator	N/A
PHROG	UHGV-0040082_34	phrog_4	67.4	3.1e-19	transcriptional repressor	transcription regulation
UniRef90	UHGV-0040082_34	UniRef90_A0A8E0J140	315.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0040082_34	173443.Q8HAG7_BPST6	146.0	8.98933e-42	Peptidase S24-like	N/A
Pfam	UHGV-0040082_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0040082_34	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
structural_annotation	UHGV-0040082_34	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_36	phrog_34942	104.0	6.8e-31	N/A	unknown function
PHROG	UHGV-0040082_37	phrog_155	143.2	1.49939e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_37	UniRef90_A0A8E2MAT6	382.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0040082_37	1168549.I6RSN3_9CAUD	216.0	0	ERF superfamily	N/A
Pfam	UHGV-0040082_37	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0040082_37	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0040082_38	K03111	106.7	3.7e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0040082_38	phrog_44	123.3	2.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0040082_38	UniRef90_A0A2X5PKV7	214.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0040082_38	1127514.H9C0R6_9CAUD	105.0	4.84e-27	Single-strand binding protein family	N/A
Pfam	UHGV-0040082_38	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0040082_38	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0040082_38	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0040082_38	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_39	phrog_656	104.8	4.4e-31	abc2 anti-RecBCD	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0040082_39	UniRef90_A0A2X5QNF8	186.0	0	Anti-RecBCD protein 2	N/A
PHROG	UHGV-0040082_40	phrog_28542	132.7	7.6e-40	N/A	unknown function
UniRef90	UHGV-0040082_40	UniRef90_UPI00132F83E7	127.0	7.37e-37	N/A	N/A
PHROG	UHGV-0040082_43	phrog_28396	197.8	0	N/A	unknown function
UniRef90	UHGV-0040082_43	UniRef90_V0A7X8	174.0	0	Toxin-antitoxin system, toxin component domain protein	N/A
PHROG	UHGV-0040082_44	phrog_34199	159.1	0	N/A	unknown function
PHROG	UHGV-0040082_45	phrog_34371	234.9	0	N/A	unknown function
PHROG	UHGV-0040082_46	phrog_1515	199.6	0	N/A	unknown function
PHROG	UHGV-0040082_47	phrog_28996	178.5	0	N/A	unknown function
PHROG	UHGV-0040082_49	phrog_36823	143.9	2.49431e-43	N/A	unknown function
PHROG	UHGV-0040082_50	phrog_14059	48.9	0.0000000000001	N/A	unknown function
UniRef90	UHGV-0040082_50	UniRef90_A0A4T3YH70	148.0	2.8026e-45	Cell division protein FtsK	N/A
PHROG	UHGV-0040082_51	phrog_303	70.3	2.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0040082_51	1315956.M9QRN1_9CAUD	74.7	9.66e-17	N/A	N/A
PHROG	UHGV-0040082_52	phrog_111	161.1	0	DNA methyltransferase	other
UniRef90	UHGV-0040082_52	UniRef90_A0A4T3YHC2	370.0	0	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0040082_52	642227.HA49_08485	196.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0040082_52	oMTase_00010	77.7	8.1e-24	orphan methyltransferase	RM
Pfam	UHGV-0040082_52	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0040082_52	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0040082_52	PF05869,MF_01872,TIGR01712,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0040082_53	phrog_9871	56.3	8.1e-16	N/A	unknown function
UniRef90	UHGV-0040082_53	UniRef90_UPI001BFD0BE6	120.0	2.77e-34	N/A	N/A
eggNOG-mapper	UHGV-0040082_53	624134.T2DRE9_9CAUD	60.8	0.0000000000989	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0040082	Yes	33,970	46	63	1