vOTU vOTU-136863

vOTU: vOTU-136863

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-136863
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00187 → vGENUS-00218 → vOTU-136863
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0211046
Biosample ID	SAMN00035158
Genome length (bp)	32,925 bps
CheckV completeness	71.40% (Medium-quality)
CDS count	50
CDS density	91.62%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	3	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211046_1	phrog_1252	303.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_1	UniRef90_UPI00189DB5D1	456.0	0	DNA polymerase elongation subunit (family B)	N/A
eggNOG-mapper	UHGV-0211046_1	1121866.AUGK01000003_gene1403	325.0	0	DNA replication proofreading	N/A
COG	UHGV-0211046_1	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-0211046_1	PF08490,MF_04010,NF004416,COG0417	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211046_2	UniRef90_UPI0018774E0E	135.0	3.78e-36	reductase	N/A
eggNOG-mapper	UHGV-0211046_2	1235835.C814_01169	132.0	1.47e-35	N/A	N/A
COG	UHGV-0211046_2	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0211046_4	phrog_155	60.0	3.7e-17	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_4	UniRef90_UPI001A9A8367	380.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0211046_4	936572.HMPREF1148_0677	67.8	0.0000000000947	ERF superfamily	N/A
Pfam	UHGV-0211046_4	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0211046_4	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_5	phrog_434	87.0	1.9e-25	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_5	UniRef90_H1CES3	592.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0211046_5	1121866.AUGK01000003_gene1405	342.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0211046_5	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0211046_5	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0211046_5	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0211046_6	cluster_73853	33.9	0.0000022	NA	N/A
structural_annotation	UHGV-0211046_8	PF05037,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_9	phrog_1485	97.7	1.3e-28	N/A	unknown function
UniRef90	UHGV-0211046_9	UniRef90_H1CES0	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211046_9	1415774.U728_1099	101.0	5.86e-27	N/A	N/A
Pfam	UHGV-0211046_9	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
PHROG	UHGV-0211046_10	phrog_229	120.8	1e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-0211046_10	UniRef90_UPI001AB02E43	218.0	0	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0211046_10	428125.CLOLEP_01391	131.0	4.18e-38	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0211046_10	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0211046_10	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0211046_10	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
KOfam	UHGV-0211046_11	K03698	48.1	0.00000000000017	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0211046_11	phrog_28876	114.2	8.7e-34	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0211046_11	UniRef90_A0A1C5MUY3	245.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0211046_11	1235800.C819_00499	169.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0211046_11	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0211046_11	PF01966,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
KOfam	UHGV-0211046_12	K03465	194.1	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0211046_12	phrog_85	137.7	4.90006e-41	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_12	UniRef90_UPI001898977C	354.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0211046_12	1336241.JAEB01000001_gene147	250.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0211046_12	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0211046_12	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0211046_12	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0211046_12	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_15	phrog_30550	191.1	0	N/A	unknown function
UniRef90	UHGV-0211046_15	UniRef90_A0A6N9PX25	162.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0211046_15	1519439.JPJG01000077_gene920	142.0	1.98003e-41	Cell Wall Hydrolase	N/A
structural_annotation	UHGV-0211046_15	TIGR02869	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_16	phrog_1829	140.8	7.40026e-42	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_16	UniRef90_H1CER3	469.0	0	PriCT_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0211046_16	1121866.AUGK01000003_gene1409	207.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0211046_16	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0211046_16	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0211046_16	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
KOfam	UHGV-0211046_17	K07171	101.7	1.1e-29	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0211046_17	phrog_1936	109.0	3.9e-32	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0211046_17	UniRef90_UPI001D0750B0	157.0	0	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0211046_17	553973.CLOHYLEM_03974	98.2	6.3e-25	Toxic component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0211046_17	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0211046_17	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0211046_17	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
KOfam	UHGV-0211046_19	K06919	80.5	1.8e-23	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0211046_19	phrog_1156	317.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_19	UniRef90_H1CER1	976.0	0	Phage/plasmid primase, P4 family domain-containing protein	N/A
eggNOG-mapper	UHGV-0211046_19	649747.HMPREF0083_00553	319.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0211046_19	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0211046_19	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0211046_19	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0211046_19	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0211046_19	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0211046_19	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_20	phrog_22389	50.1	0.000000000000029	N/A	unknown function
structural_annotation	UHGV-0211046_20	PF01402,COG4710	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0211046_23	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
PHROG	UHGV-0211046_25	phrog_606	50.5	0.000000000000017	terminase small subunit	head and packaging
UniRef90	UHGV-0211046_25	UniRef90_UPI001D08D6B6	360.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0211046_25	1235802.C823_05975	72.4	0.000000000000298	N/A	N/A
Pfam	UHGV-0211046_25	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0211046_25	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211046_28	196490.AUEZ01000004_gene3972	47.0	0.00000413	N/A	N/A
Pfam	UHGV-0211046_29	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
KOfam	UHGV-0211046_30	K14060	122.8	3.5e-36	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0211046_30	phrog_125	145.0	4.30199e-43	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211046_30	UniRef90_UPI001C023A41	266.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0211046_30	1158614.I592_01237	151.0	1.13505e-43	Resolvase, N terminal domain	N/A
Pfam	UHGV-0211046_30	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0211046_30	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0211046_30	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211046_31	PF19190,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_32	phrog_1233	56.9	4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0211046_32	1232443.BAIA02000078_gene33	84.0	3.3e-20	N/A	N/A
PHROG	UHGV-0211046_33	phrog_38	152.0	4.2039e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0211046_33	UniRef90_A0A6I2QXZ5	1031.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0211046_33	1298920.KI911353_gene2682	300.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0211046_33	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0211046_33	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211046_33	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_34	phrog_64	211.3	0	portal protein	head and packaging
UniRef90	UHGV-0211046_34	UniRef90_A0A6I2QXE1	759.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0211046_34	1123263.AUKY01000015_gene1609	420.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0211046_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0211046_34	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_37	phrog_1328	117.6	8e-35	major head protein	head and packaging
UniRef90	UHGV-0211046_37	UniRef90_UPI00164DD2D5	585.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211046_37	665956.HMPREF1032_03619	226.0	0	N/A	N/A
Pfam	UHGV-0211046_37	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0211046_37	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211046_38	UniRef90_UPI001898B4B4	172.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0211046_38	1298920.KI911353_gene2658	60.5	0.000000000211	N/A	N/A
Pfam	UHGV-0211046_38	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0211046_38	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211046_39	1121866.AUGK01000003_gene1432	69.7	0.000000000000179	N/A	N/A
eggNOG-mapper	UHGV-0211046_40	1298920.KI911353_gene2654	60.1	0.00000000694	N/A	N/A
structural_annotation	UHGV-0211046_41	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_42	phrog_158	60.1	4e-17	major tail protein	tail
UniRef90	UHGV-0211046_42	UniRef90_UPI00164D954A	241.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0211046_42	1232453.BAIF02000058_gene1634	95.1	4.05e-23	N/A	N/A
structural_annotation	UHGV-0211046_42	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211046_43	UniRef90_UPI0018999178	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211046_43	1123263.AUKY01000015_gene1618	82.0	9.82e-19	N/A	N/A
Pfam	UHGV-0211046_43	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0211046_43	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211046_44	1211844.CBLM010000023_gene987	70.1	0.0000000000000408	N/A	N/A
PHROG	UHGV-0211046_45	phrog_1535	161.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0211046_45	1121866.AUGK01000003_gene1437	283.0	0	phage tail tape measure protein	N/A
COG	UHGV-0211046_45	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0211046_45	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_46	phrog_1194	92.6	3.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0211046_46	742740.HMPREF9474_03515	130.0	1.95e-37	N/A	N/A
structural_annotation	UHGV-0211046_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_47	phrog_13879	291.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0211046_47	665956.HMPREF1032_03630	249.0	0	N/A	N/A
structural_annotation	UHGV-0211046_47	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_48	phrog_18725	76.0	5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0211046_48	1226322.HMPREF1545_00062	106.0	7.62e-27	N/A	N/A
PHROG	UHGV-0211046_49	phrog_37900	81.7	1.5e-25	N/A	unknown function
UniRef90	UHGV-0211046_49	UniRef90_H1CEN2	692.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211046_49	1519439.JPJG01000060_gene1894	179.0	0	N/A	N/A
Pfam	UHGV-0211046_49	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0211046_49	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0211046_49	PF19789,PF14686,TIGR04183,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0211046_50	phrog_30516	54.5	3.1e-16	N/A	unknown function
structural_annotation	UHGV-0211046_50	PF05635,NF008911	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0211046	Yes	32,925	49	71	1